Phytoplankton Photosynthesis Research Articles

Short-term effects of solar storms in phytoplankton photosynthesis

The potential short-term influence of a solar radiation storm on microalgal photosynthesis is investigated. We focus on muons from the secondary cosmic rays at sea level, given their high penetrating power. According to NOAA’s classification of solar radiation storms, two kinds of solar storms are considered: moderate/strong and extreme. An exponential decay of muon fluxes down the water column and a direct proportionality between their penetrating power and energy are assumed. This allows obtaining a function of ionizing radiation to be embedded in a physical-mathematical model for photosynthesis previously modified by some of us to include particulate ionizing radiation. It is shown that moderate/strong solar radiation storms can cause a short-term depletion of photosynthesis of up to 61%, while this figure scales to 75% for extreme storms.

The role of PFAS in unsettling ocean carbon sequestration.

Poly- and perfluoroalkyl substances (PFAS) and global climate change have attracted worldwide attention. PFAS have been found all across the planet, from the polar regions to the global ocean. Global oceans have emerged as a substantial sink for the carbon in the environment due to their remarkable capacity to absorb atmospheric carbon. Oceans absorb around 24% of the world's CO2 emissions. Thus, the ocean plays a prominent role in the earth's carbon cycle. However, the widespread application of PFAS in a wide range of products and the inefficient management of PFAS-containing wastes made them ubiquitous pollutants, which are increasingly getting as a pollutant of emerging concern. Marine PFAS pollutants can produce harmful effects on gas exchange and the ocean's carbon cycle. Thus, it leads to an increase in greenhouse gas emissions, which eventually adversely affects global warming and climate change. Consequently, threats of marine PFAS to oceans carbon sequestration are discussed in this paper. Marine PFAS pollutants adversely affect the following sectors: (1) The growth and photosynthesis of phytoplankton, (2) development and reproduction of zooplankton by causing toxicity in zooplankton, (3) marine biological pomp, and (4) carbon stock of oceans. In this way, marine PFAS can pose a threat to ocean carbon sequestration. It is expected that this study can develop knowledge about the potential impact of PFAS on ocean carbon sequestration. However, the need for further research to investigate the hidden dimensions of this issue, including the potential scope and scale of this impact, should not be overlooked.

Trends in Changes in Primary Phytoplankton Production According to Remote Sensing Data in the Deep-Sea Region of the Black Sea for 1998–2015

The analysis of long-term seasonal changes in the concentration of chlorophyll, the maximum rate of phytoplankton photosynthesis and water temperature in the surface layer of the open waters Black Sea from 1998 to 2015 has been carried out. The trends of these indicators were assessed. For the research, we used the data of satellite observations SeaWiFS and MODIS-Aqua, MODIS-Terra. Typical positive temperature trends of 4 % in the deep-water western part of the sea. An annual temperature rise in deep-water areas was noted in the western cyclonic circulation by 0.038 °C. According to average annual data in other areas, no increase was found. The increase was mainly due to the winter season. Negative trends of primary phytoplankton production within 16.4–18.6 % of the initial level according to average annual values throughout the deep-water area. Significance level — p < 0.1. A decrease in primary production was observed in the summer. There were no statistically significant directional changes in chlorophyll concentration based on averaged data over 18 years. In different parts of the deep-sea area, the direction of interannual and seasonal changes in all indicators was similar. The emerging trend towards a decrease in phytoplankton productivity in recent years may lead to a restructuring of the phytoplankton community.

Clarifying water clarity: A call to use metrics best suited to corresponding research and management goals in aquatic ecosystems

Clarifying water clarity: A call to use metrics best suited to corresponding research and management goals in aquatic ecosystems

Climate Disruption Caused by a Decline in Marine Biodiversity and Pollution

The world has focused on carbon mitigation as the only solution for climate change. This discussion paper considers how marine biodiversity regulates the climate, and the factors that control marine biodiversity.
 The main Greenhouse Gas (GHG) is water vapor, which accounts for 75% of all GHGs; the second most important is carbon dioxide, followed by methane and particulates such as black carbon (BC) soot. The concentration of water vapor in the atmosphere is regulated by air temperature; warmer conditions lead to higher evaporation, which in turn increases the concentration of water vapor, the Clausius-Clapeyron relation. This means that as the oceans and atmosphere warm, a self-reinforcing feedback loop accelerates the evaporation process to cause further warming.
 It is not considered possible to directly regulate atmospheric water vapor. This explains why climate change mitigation strategies have focussed primarily on reducing carbon dioxide emissions as the means to reduce water vapor. This report concludes that the current climate change mitigation strategy will not work on its own because it depends on decreasing the concentration of atmospheric carbon dioxide and on the assumption that water vapor is only regulated by temperature.
 71% of planet Earth is covered by an ocean that has a surface microlayer (SML) between 1 µm and 1000µm deep, composed of lipids and surfactants produced by marine phytoplankton. This SML layer is known to promote the formation of aerosols and clouds; it also reduces the escape of water molecules and slows the transfer of thermal energy to the atmosphere. The concentration of water vapor is increasing in our atmosphere, and 100% of this increase is evaporation from the ocean surface; water vapour from land systems is decreasing. This means that the oceans are almost entirely responsible for climate change.
 The SML layer attracts toxic forever, lipophilic chemicals, microplastics and hydrophobic black carbon soot from the incomplete combustion of fossil fuels. Concentrations of toxic chemicals are 500 times higher in this SML layer than in the underlying water. Toxic forever chemicals combined with submicron and microplastic particles and black carbon particulates are known to be toxic to plankton. Marine primary productivity or phytoplankton photosynthesis may have declined by as much as 50% since the 1950s. Reduced phytoplankton plant growth equates to a degraded SML membrane, reduced carbon assimilation, and higher concentrations of dissolved carbon dioxide in ocean surface water, which accelerates the decline in ocean pH. The key phytoplankton species responsible for the production of the SML layer are the first to suffer from pH decline, a process called “ocean acidification”.
 Ocean acidification will lead to a regime shift away from the key carbonate-based species and diatoms below pH 7.95 which will be reached by 2045. The SML layer will decrease, allowing evaporation and atmospheric water vapor concentrations to increase. A reduced SML layer will lead to fewer aerosols, cloud formation and precipitation, as well as increased humidity and temperature. When clouds form under these conditions, the higher humidity will cause torrential downpours and flooding. The result could be catastrophic climate change, even if we achieve net zero by 2050. In parallel, ocean acidification and the collapse of the marine ecosystem could also lead to the loss of most seals, birds, whales, fish, and food supply for 3 billion people.

Phytoplankton photophysiology varies depending on nitrogen and light availability at the subsurface chlorophyll maximum in the northern Chukchi Sea

Vertical distributions of phytoplankton in the Arctic Ocean are characterized by a very narrow subsurface chlorophyll maximum (SCM) layer formed every summer after the sea ice retreats. Despite the prevalence of this narrow SCM layer, phytoplankton photosynthetic response to climate change remains to be elucidated. Here, we examined the photophysiological properties of phytoplankton in the SCM layer in the northern Chukchi Sea during the summers of 2015–2018. There was a significant difference in the SCM depth between the northwestern and northeastern Chukchi Sea determined by the distribution of Pacific Summer Water (PSW) around the SCM layer (34 ± 14 m vs. 49 ± 10 m, respectively). The maximum quantum yield of photochemistry in photosystem II (Fv/Fm) in the SCM phytoplankton was high (Fv/Fm ≥ 0.54) and similar in both regions until 2016; however, since then, Fv/Fm in the northeastern Chukchi Sea has decreased by approximately 10%. This decrease was accompanied by a marked decrease in the fraction of microplankton, which are known to be susceptible to nutrient limitation. This result suggests a reduction in nitrogen availability in the SCM layer in the northeastern Chukchi Sea. Meanwhile, the maximum electron transfer rate (ETRmax) did not have a significant relationship with the nitrogen availability and phytoplankton community size structure in the SCM layer; however the improved light conditions (with an approximately two-fold increase in the relative ratio of surface PAR reaching the SCM layer) increased ETRmax by up to 30% in the SCM phytoplankton in the northwestern Chukchi Sea. Therefore, these results provide a better understanding of how changes in nitrogen and light availability could affect phytoplankton photosynthesis and primary production in the Arctic Ocean.

Seasonal variations of zooplankton distribution with relation to water quality parameters off Godavari Estuary, Andhra Pradesh

Zooplankton abundance and diversity of zooplankton with relation to physico-chemical parameters in five stations at off Godavari estuary, Bay of Bengal during October 2010 to May 2011. A total of 29 samples were collected from the five stations, whereby 19 zooplankton groups belonging to six phylum were identified. Among the groups, Copepoda was the most dominant and abundant group which contributed 54.17%-72.73% of the total zooplankton population. Zooplankton holds a key position in the food web as it was directly related to the consumption of organic energy produced by phytoplanktonic photosynthesis and then by transforming it to the higher tropical levels of hetirotropes such as fish. This disappearance may be due to the fact that some species occur in spores, under favourable conditions spore germinate and appear as zooplankton. Plankton diversity and physico-chemical parameters of water are important criteria for evaluating the suitability of water for culture practices. Therefore, structure of different fish food organisms assumes greater significance to fisheries management.

Effects of Environmental Concentrations of Total Phosphorus on the Plankton Community Structure and Function in a Microcosm Study.

The excessive nutrients in freshwater have been proven to promote eutrophication and harmful algae blooms, which have become great threats to water quality and human health. To elucidate the responses of the plankton community structure and function to total phosphorus (TP) at environmental concentrations in the freshwater ecosystem, a microcosm study was implemented. The results showed that plankton communities were significantly affected by the TP concentration ≥ 0.1 mg/L treatments. In terms of community structure, TP promoted the growth of Cyanophyta. This effect was transmitted to the zooplankton community, resulting in the promotion of Cladocera growth from day 42. The community diversities of phytoplankton and zooplankton had been continuously inhibited by TP. The principal response curve (PRC) analysis results demonstrated that the species composition of phytoplankton and zooplankton community in TP enrichment treatments significantly (p ≤ 0.05) deviated from the control. For community function, TP resulted in the decline in phytoplankton photosynthesis. The chlorophyll fluorescence parameters were significantly inhibited when TP concentration reached 0.4 mg/L. In TP ≥ 0.1 mg/L treatments, the reductions in total phytoplankton abundances led to a continuous decrease in pH. This study can directly prove that the plankton community changes significantly when TP concentrations are greater than 0.1 mg/L and can help managers to establish specific nutrient management strategies for surface water.

Rapid bacterioplankton transcription cascades regulate organic matter utilization during phytoplankton bloom progression in a coastal upwelling system

Coastal upwelling zones are hotspots of oceanic productivity, driven by phytoplankton photosynthesis. Bacteria, in turn, grow on and are the principal remineralizers of dissolved organic matter (DOM) produced in aquatic ecosystems. However, the molecular processes that key bacterial taxa employ to regulate the turnover of phytoplankton-derived DOM are not well understood. We therefore carried out comparative time-series metatranscriptome analyses of bacterioplankton in the Northwest Iberian upwelling system, using parallel sampling of seawater and mesocosms with in situ-like conditions. The mesocosm experiment uncovered a taxon-specific progression of transcriptional responses from bloom development (characterized by a diverse set of taxa in the orders Cellvibrionales, Rhodobacterales, and Pelagibacterales), over early decay (mainly taxa in the Alteromonadales and Flavobacteriales), to senescence phases (Flavobacteriales and Saprospirales taxa). Pronounced order-specific differences in the transcription of glycoside hydrolases, peptidases, and transporters were found, supporting that functional resource partitioning is dynamically structured by temporal changes in available DOM. In addition, comparative analysis of mesocosm and field samples revealed a high degree of metabolic plasticity in the degradation and uptake of carbohydrates and nitrogen-rich compounds, suggesting these gene systems critically contribute to modulating the stoichiometry of the labile DOM pool. Our findings suggest that cascades of transcriptional responses in gene systems for the utilization of organic matter and nutrients largely shape the fate of organic matter on the time scales typical of upwelling-driven phytoplankton blooms.

Characteristics and Dfferences of Dissolved Oxygen Stratification in Different Tributaries of Three Gorges Reservoir During Impoundment Period

Taking the Xiaojiang and Xiangxi Rivers, two typical tributaries of the Three Gorges Reservoir, as examples, this study analyzed and compared the hydrodynamic, thermal stratification, and temporal and spatial differences in dissolved oxygen (DO) and their responses to the water storage process in the two tributaries through field monitoring at different stages of the 2020 impoundment period. The results showed that:① at the initial stage of water storage, the DO in the surface layer of the Xiaojiang River was higher (7.00-13.00 mg·L-1) due to atmospheric reoxygenation and phytoplankton photosynthesis, and the oxycline appeared in the water depth of 3-5 m. A large area of anoxia (DO<2.00 mg·L-1) or even an anaerobic sublayer occurred in the water below 5 m. The DO in the Xiangxi River could be divided into three layers vertically:oxygen-rich surface water (8.00-12.00 mg·L-1), middle water (6.00-8.00 mg·L-1), and low-oxygen bottom water (4.00-6.00 mg·L-1). ② Thermal stratification provided a stable physical environment, whereas the upstream inflow and vegetation decomposition in the water-level fluctuation zone increased the content of organic matter, which likely increased the oxygen consumption which was conducive to the formation of an anaerobic bottom layer. In the Xiangxi River, the risk of hypoxia in the bottom water body was low because of the oxygen replenishment from the long-term downslope-bottom density current.③ Continuous monitoring also showed that the storage of the reservoir played a significant role in the replenishment of DO in tributaries, which effectively and rapidly improved the anaerobic phenomenon in the Xiaojiang River. In the Three Gorges Reservoir, it is feasible to ameliorate the water ecological problems such as anoxia and anaerobic conditions in the tributaries via reservoir operation. This study aids understanding of the characteristics and differences of DO stratification in different tributaries of the Three Gorges Reservoir, which can provide theoretical and technical support for reservoir ecological operation.

Understanding the Implications of Hydrographic Processes on the Dynamics of the Carbonate System in a Sub-Antarctic Marine-Terminating Glacier-Fjord (53°S)

The biogeochemical dynamics of fjords in the southeastern Pacific Ocean are strongly influenced by hydrological and oceanographic processes occurring at a seasonal scale. In this study, we describe the role of hydrographic forcing on the seasonal variability of the carbonate system of the Sub-Antarctic glacial fjord, Seno Ballena, in the Strait of Magellan (53°S). Biogeochemical variables were measured in 2018 during three seasonal hydrographic cruises (fall, winter and spring) and from a high-frequency pCO2-pH mooring for 10 months at 10 ± 1 m depth in the fjord. The hydrographic data showed that freshwater input from the glacier influenced the adjacent surface layer of the fjord and forced the development of undersaturated CO2 (&amp;lt; 400 μatm) and low aragonite saturation state (ΩAr &amp;lt; 1) water. During spring, the surface water had relatively low pCO2 (mean = 365, range: 167 - 471 μatm), high pH (mean = 8.1 on the total proton concentration scale, range: 8.0 - 8.3), and high ΩAr (mean = 1.6, range: 1.3 - 4.0). Concurrent measurements of phytoplankton biomass and nutrient conditions during spring indicated that the periods of lower pCO2 values corresponded to higher phytoplankton photosynthesis rates, resulting from autochthonous nutrient input and vertical mixing. In contrast, higher values of pCO2 (range: 365 – 433 μatm) and relatively lower values of pHT (range: 8.0 – 8.1) and ΩAr (range: 0.9 – 2.0) were recorded in cold surface waters during winter and fall. The naturally low freshwater carbonate ion concentrations diluted the carbonate ion concentrations in seawater and decreased the calcium carbonate saturation of the fjord. In spring, at 10 m depth, higher primary productivity caused a relative increase in ΩAr and pHT. Assuming global climate change will bring further glacier retreat and ocean acidification, this study represents important advances in our understanding of glacier meltwater processes on CO2 dynamics in glacier–fjord systems.

Effects of oyster aquaculture on carbon capture and removal in a tropical mangrove lagoon in southwestern Taiwan

Blue carbon ecosystems (BCEs) are a promising resource for the mitigation of global warming; however, climate spectrums and anthropogenic activities could influence the fragile balance of BCEs as carbon sinks or sources. We assess how oyster farming affects dissolved inorganic carbon (DIC) and total alkalinity (TA) on CO2 fluxes in a mangrove-dominated lagoon. Water physical, chemical and biological parameters were recorded by in-situ buoys within the lagoon and at its inflow. Structural equation modeling was adopted to clarify the factors/processes controlling the partial pressure of CO2 (pCO2). A three-dimensional environmental model followed by a conceptual DIC model was used to quantify the spatiotemporal patterns of capture and release of DIC and TA by oyster production. The results showed that 49% of TA and DIC released from mangroves was depleted by oyster shell formation. DIC was reduced by algal photosynthesis and algal was served as a food source supporting oyster production. Annual oyster production through phytoplankton photosynthesis accounted for 11% of the atmosphere carbon inflows, suggesting that oyster production served as a significant atmospheric/terrestrial carbon sink in the lagoon. The results indicate that mangroves benefit local oyster production by acting as an important source of DIC and TA, and that the oyster aquaculture contributed to carbon capture in a mangrove-dominated lagoon ecosystem.

Responses of Phytoplanktonic Chlorophyll-a Composition to Inorganic Turbidity Caused by Mine Tailings

Inorganic turbidity can limit light penetration in water and reduce phytoplankton photosynthesis. Anthropogenic activities such as mining can produce or augment the amount of suspended inorganic particles in water. Recent mining disasters in Brazil have released tons of mine tailings into aquatic ecosystems, with known and unknown negative consequences for aquatic life, biodiversity, and ecosystem services beyond the human and material losses. Here, we investigated the effects of inorganic turbidity on phytoplankton chlorophyll content and composition caused by sediments from two areas in Lake Batata, one natural and the other impacted by bauxite tailings. We experimentally compared the effects of different levels of turbidity (12, 50, and 300 NTU) caused by the addition of sediments from the two lake areas on a chlorophyll-a gradient (5, 15, and 25 μg/L). Inorganic turbidity did not consistently reduce chlorophyll-a concentrations. In treatments with high chlorophyll-a, high turbidity was associated with lower chlorophyll-a concentrations at the end of the experiment. On the other hand, in low-chlorophyll treatments, high turbidity was associated with higher chlorophyll-a concentrations. In treatments with sediments from the natural area, overall chlorophyll-a levels were higher than in treatments with sediments from the impacted area. Phagotrophic algae dominated both in treatments with sediments from the impacted area (Chrysophyceae 34%, Chlorophyceae 26%, and Cyanobacteria 22% of total density) and in treatments with sediment from the natural area (Euglenophyceae 26%, Chrysophyceae 23%, and Chlorophyceae 20%). We conclude that high turbidity does not lead to a reduction in chlorophyll-a concentrations and sediment from the natural area allowed higher chlorophyll-a levels, indicating that impacted area sediment affected more phytoplankton.

Observed denitrification in the northeast Arabian Sea during the winter-spring transition of 2009

The central and northeast Arabian Sea (AS) has an intense and thick oxygen minimum zone (OMZ) and denitrification zone. It is comparable with the strongest OMZ of the north-equatorial Pacific Ocean. Denitrification in the AS is revisited using a set of cruise observations collected during February–March of 2009 by the Centre for Marine Living Resources, India. The region possesses one of the most robust N* depleted water reaching as low as -20 μmol l −1 at depths (~600 m). In AS, the oxygen depletion is mainly due to sluggish circulation, weak lateral and vertical ventilation. The biological respiration in oxygen deficit condition depletes nitrate and further modifies the Redfield ratio at intermediate depths (200-600 m) from 16N:1P to 8N:1P. Further, analysis of phytoplankton groups present at the surface identifies the presence of Trichodesmium erythraeum , a nitrogen fixing species. The denitrification rate is estimated as 25.3 ± 7.0 Tg N yr −1 . It is consistent with past estimates, and no dramatic change in denitrification in the AS was noticed. The study also highlights the potential for further research on N 2 production from the Arabian Sea Oxygen Minimum Zones in a changing climate. Nitrate is an essential compound for phytoplankton photosynthesis. In most ocean waters, the ratio between N and P is a constant (16:1), called the Redfield ratio. Various processes can modify the Redfield ratio in the ocean, such as denitrification, nitrification, and anammox. Denitrification is a process through which the microbial processes remove the fixed nitrogen in the absence of enough dissolved oxygen in the water column (oxygen minimum zone; OMZ). In the Arabian Sea, a vast region of OMZ formed due to the combined effects of biological respiration, sluggish circulations in the intermediate depths, and strong thermocline, which prohibits the supply of oxygen from deep waters. Our study revisits the denitrification in the Arabian Sea OMZ region during the winter to spring transition season in 2009 using a set of onboard measurements. Due to this denitrification, an intense modification in the Redfield ratio in the northeast Arabian Sea region's intermediate depths is noted as 8N:1P. • Low N* in the intermediate depths in the Arabian Sea indicates denitrification. • Denitrification modifies the Redfield Ratio from 16 N:1P to 8 N:1P. • The study estimates a rate of denitrification as 25.3 ± 7.0 Tg N yr -1. • Study confirms no drastic change in denitrification for the Arabian Sea.

Drivers of phytoplankton biomass and diversity in a macrotidal bay of the Amazon Mangrove Coast, a Ramsar site

Biodiversity maintenance is a main goal in ecology. Hence, phytoplankton diversity and biomass were analyzed in a coastal bay (Cumã Bay) of the Amazon Macrotidal Mangrove Coast, which has been designated as an international hotspot for conservation (Ramsar site) with high biological productivity and diversity that provides crucial ecosystem services and elevated fish production. An ecohydrology-based approach was applied to identify the main factors that drive the patterns of phytoplankton diversity and biomass, considering spatio-temporal analyses of physical, chemical, and biological variables from May 2019 to June 2020. Phytoplankton dynamics were investigated using multivariate analyses, correlations, and generalized additive models. Seven indices were tested to select the most efficient biodiversity metric. The hydrological conditions of Cumã Bay were governed primarily by elevated precipitation and macrotidal dynamics, resulting in two different functional zones based on environmental variability: the freshwater influence zone and marine influence zone. Seasonally, the maximum freshwater discharge, low salinity and light availability promoted cell abundance and biomass increase, with blooms of Skeletonema costatum, which reduced the taxonomic diversity of the community in the rainy season. During the dry season, turbid waters resulting from macrotidal dynamics and wind speed limited light penetration and phytoplankton photosynthesis, leading to a higher uniformity in the species distribution. Shannon index was the most sensitive biodiversity metric to environmental changes. This study found that deterministic processes governed the community, which rainfall on the Amazon coast, along with wind speed, salinity, light availability and nutrients were the main controlling factors for phytoplankton diversity and richness.

Response of CO2 and CH4 transport to damming: A case study of Yulin River in the Three Gorges Reservoir, China

The growing number of dams in the Three Gorges Reservoir (TGR) make tributaries of TGR into spatially complex and temporally dynamic systems. To assess the influence of damming on the carbon emission in the tributary of TGR, we investigated the spatial heterogeneity of CO2, CH4, organic carbon, inorganic carbon, and evaluated the transport mechanisms of CO2 and CH4 within water column during different TGR operation periods. We found that mean CO2 and CH4 concentrations in water downstream (44.04 and 0.44 μmol L−1 for CO2 and CH4, respectively) were lower than upstream (48.36 and 1.63 μmol L−1 for CO2 and CH4, respectively) in the impoundment period of TGR, which was consistent with the spatial variations of organic carbon. In the drainage period of TGR, the mean CO2 concentration of upstream (58.71 μmol L−1) was significantly lower than that of downstream (88.92 μmol L−1). The higher CO2 concentration downstream was attributed to terrestrial input and higher microbial diversity of the water column, while the lower CO2 concentration upstream was due to the photosynthesis of phytoplankton. Furthermore, low CH4 concentrations (less than 0.1 μmol L−1) of both upstream and downstream were detected in the drainage period. Based on results of 16s rRNA sequencing, quantitative PCR, and functional prediction, it was indicated that aerobic CH4 oxidation predominantly in the bottom water layer reduced CH4 of the water column in drainage period. Our results expand the theory of CO2 and CH4 transport within the water column in complex river systems and provide theoretical references for the distribution of carbon in the dammed tributaries of TGR.

The Use of VGPM to Estimate Oceanic Primary Production: A “Tango” Difficult to Dance

One of the primary goals of launching an ocean color satellite is to obtain over the global ocean synoptic measurements of primary production (PP), a measure of phytoplankton photosynthesis. To reach this ultimate goal, in addition to precise measurements of radiance at the satellite altitude and robust data processing systems, a key requirement is to link primary production with satellite-derived products, where a model must be developed and applied. Although many models have been developed in the past decades, the vertically generalized production model (VGPM) developed by Behrenfeld and Falkowski, due to its simplicity and ease of use with satellite products, has been a de facto “standard” for the estimation of PP from ocean color measurements over the past 20+ years. Thus, it has significantly influenced the ocean color remote sensing and the biological oceanographic communities. In this article, we discuss the limitations of VGPM (and PP models based on chlorophyll concentration) in estimating primary production.

Mechanism and geological significance of anomalous negative δ13Ckerogen in the Lower Cambrian, NW Tarim Basin, China

The Lower Cambrian black strata with an anomalous negative excursion of carbon isotope in organic carbon are widely developed in many continents, contracting few attentions from scholars around the world. Based on the detailed investigations for the strata from the Xiaoerbulake and Shiairike outcrop sections located in the Aksu area, northwest Tarim Basin, multiple test and analysis methods including the total organic carbon (TOC), carbon isotope of kerogen (δ13Ckerogen), aryl isoprenoids and major/trace elements were systematically performed to reveal the mechanism and developmental model for the anomalous negative δ13Ckerogen. This anomalous negative excursion was caused by the coupling of paleoweathering and hydrothermal activities. Euxinic bottom water created by hydrothermal activities made the organic carbon (CO2 or HCO3-) from the decomposing organisms as the additional carbon source of phytoplankton photosynthesis, resulting in the development of 13C-depleted original organisms. Insufficient availability of essential nutrient (particularly Fe) caused by paleoweathering enhanced the low growth rate, resulting in the development of more 13C-depleted original organisms during the deposition of the organic-poor siliceous shales compared to that of the organic-rich shales. Besides, TOC was mainly affected by the dilution of high concentrations of hydrothermal SiO2, resulting in the organic-rich shales under weak hydrothermal conditions, while the organic-poor siliceous shales under strongly hydrothermal condition. Importantly, the production of anomalous negative δ13CKerogen triggered the occurrence of diagnostic biomarkers, aryl isoprenoids, indicating the photic zone euxinia. These contributes allow for potential application for deep petroleum exploration in the Lower Paleozoic in the Tarim Basin and insights for biological evolution.

Vertically stratified water source characteristics and associated driving mechanisms of particulate organic carbon in a large floodplain lake system

Particulate organic carbon (POC) is an important component of lake organic carbon (C) pools, of which different factors drive vertical distributions and sources. This study used the dual stable isotope (δ13C and δ15N) approach to investigate vertical POC sources and drivers in a large floodplain lake system. Findings showed that POC composition gradually changed from endogenous dominant to exogenous dominant sequentially from the surface layer to the bottom layer of Lake Poyang. Environmental factors associated with phytoplankton photosynthesis as well as nutrient levels primarily drove surface POC. Moreover, soil erosion, sediment deposition, and resuspension strongly affected POC distribution and composition in the middle and bottom layers of the lake. POC sources were also affected by factors associated with vertical mixing, such as wind speed and water depth. Litter from C3 plants significantly contributed to POC concentrations in the middle and bottom layers of the lake. Results from this study can benefit our overall understanding of the potential driving mechanisms of lake C cycling processes, aquatic ecosystem functions, and pollutant migration.

Irradiance and nutrient-dependent effects on photosynthetic electron transport in Arctic phytoplankton: A comparison of two chlorophyll fluorescence-based approaches to derive primary photochemistry.

We employed Fast Repetition Rate fluorometry for high-resolution mapping of marine phytoplankton photophysiology and primary photochemistry in the Lancaster Sound and Barrow Strait regions of the Canadian Arctic Archipelago in the summer of 2019. Continuous ship-board analysis of chlorophyll a variable fluorescence demonstrated relatively low photochemical efficiency over most of the cruise-track, with the exception of localized regions within Barrow Strait, where there was increased vertical mixing and proximity to land-based nutrient sources. Along the full transect, we observed strong non-photochemical quenching of chlorophyll fluorescence, with relaxation times longer than the 5-minute period used for dark acclimation. Such long-term quenching effects complicate continuous underway acquisition of fluorescence amplitude-based estimates of photosynthetic electron transport rates, which rely on dark acclimation of samples. As an alternative, we employed a new algorithm to derive electron transport rates based on analysis of fluorescence relaxation kinetics, which does not require dark acclimation. Direct comparison of kinetics- and amplitude-based electron transport rate measurements demonstrated that kinetic-based estimates were, on average, 2-fold higher than amplitude-based values. The magnitude of decoupling between the two electron transport rate estimates increased in association with photophysiological diagnostics of nutrient stress. Discrepancies between electron transport rate estimates likely resulted from the use of different photophysiological parameters to derive the kinetics- and amplitude-based algorithms, and choice of numerical model used to fit variable fluorescence curves and analyze fluorescence kinetics under actinic light. Our results highlight environmental and methodological influences on fluorescence-based photochemistry estimates, and prompt discussion of best-practices for future underway fluorescence-based efforts to monitor phytoplankton photosynthesis.