Photosynthetic Processes Research Articles

Sensitivity and responses of chloroplasts to salt stress in plants.

Chloroplast, the site for photosynthesis and various biochemical reactions, is subject to many environmental stresses including salt stress, which affects chloroplast structure, photosynthetic processes, osmotic balance, ROS homeostasis, and so on. The maintenance of normal chloroplast function is essential for the survival of plants. Plants have developed different mechanisms to cope with salt-induced toxicity on chloroplasts to ensure the normal function of chloroplasts. The salt tolerance mechanism is complex and varies with plant species, so many aspects of these mechanisms are not entirely clear yet. In this review, we explore the effect of salinity on chloroplast structure and function, and discuss the adaptive mechanisms by which chloroplasts respond to salt stress. Understanding the sensitivity and responses of chloroplasts to salt stress will help us understand the important role of chloroplasts in plant salt stress adaptation and lay the foundation for enhancing plant salt tolerance.

Photosynthetic process for removing H2S and CO2 from biogas using the microalgae Chlorella sorokiniana

Biogas is an alternative source of energy that contributes on reducing the emissions of polluting gas in comparison to fossil fuels as well as promoting the treatment of organic waste. However depending on the substrate used in its production, it may have a high concentration of carbon dioxide (CO2) and hydrogen sulfide (H2S); in these cases a treatment is necessary to make its use viable, for comply with current legislation and avoid damage to materials and health. Currently, the most widely used methods are physical-chemical, such as absorption, adsorption, membrane separation, and Pressure Swing Adsorption (PSA), among others. However, these methods are expensive and generate waste that needs to be treated. In this sense, biological methods have proved to be promising alternatives, especially photosynthetic processes using microalgae. This study aimed to evaluate the efficiency in removing CO2 and H2S from biogas through a bench-scale purifier prototype consisting of a photobioreactor and an absorption column, in a continuous biogas flow system. The experiment lasted 240 hours, during which 9 m³ of biogas were treated. In the first 24 hours, the flow rate was 1 L/min, resulting in an average removal of 60.8% of H2S and 20.2% of CO2. Between 24 hours and 240 hours of the study, the average biogas flow rate was 0.54 L/min, and an improvement in removal was observed, reaching 83.4% of H2S and 29.7% of CO2. The system showed efficiency in biogas treatment. However, possibilities for improvement were identified in terms of biogas flow and process, which could further enhance the results presented here.

Transcriptome and small RNA analysis unveils novel insights into the C4 gene regulation in sugarcane.

This study reveals miRNA indirect regulation of C4 genes in sugarcane through transcription factors, highlighting potential key regulators like SsHAM3a. C4 photosynthesis is crucial for the high productivity and biomass of sugarcane, however, the miRNA regulation of C4 genes in sugarcane remains elusive. We have identified 384 miRNAs along the leaf gradients, including 293 known miRNAs and 91 novel miRNAs. Among these, 86 unique miRNAs exhibited differential expression patterns, and we identified 3511 potential expressed targets of these differentially expressed miRNAs (DEmiRNAs). Analyses using Pearson correlation coefficient (PCC) and Gene Ontology (GO) enrichment revealed that targets of miRNAs with positive correlations are integral to chlorophyll-related photosynthetic processes. In contrast, negatively correlated pairs are primarily associated with metabolic functions. It is worth noting that no C4 genes were predicted as targets of DEmiRNAs. Our application of weighted gene co-expression network analysis (WGCNA) led to a gene regulatory network (GRN) suggesting miRNAs might indirectly regulate C4 genes via transcription factors (TFs). The GRAS TF SsHAM3a emerged as a potential regulator of C4 genes, targeted by miR171y and miR171am, and exhibiting a negative correlation with miRNA expression along the leaf gradient. This study sheds light on the complex involvement of miRNAs in regulating C4 genes, offering a foundation for future research into enhancing sugarcane's photosynthetic efficiency.

Seasonal and Species‐Level Water‐Use Strategies and Groundwater Dependence in Dryland Riparian Woodlands During Extreme Drought

AbstractDrought‐induced groundwater decline and warming associated with climate change are primary threats to dryland riparian woodlands. We used the extreme 2012–2019 drought in southern California as a natural experiment to assess how differences in water‐use strategies and groundwater dependence may influence the drought susceptibility of dryland riparian tree species with overlapping distributions. We analyzed tree‐ring stable carbon and oxygen isotopes collected from two cottonwood species (Populus trichocarpa and P. fremontii) along the semi‐arid Santa Clara River. We also modeled tree source water δ18O composition to compare with observed source water δ18O within the floodplain to infer patterns of groundwater reliance. Our results suggest that both species functioned as facultative phreatophytes that used shallow soil moisture when available but ultimately relied on groundwater to maintain physiological function during drought. We also observed apparent species differences in water‐use strategies and groundwater dependence related to their regional distributions. P. fremontii was constrained to more arid river segments and ostensibly used a greater proportion of groundwater to satisfy higher evaporative demand. P. fremontii maintained ∆13C at pre‐drought levels up until the peak of the drought, when trees experienced a precipitous decline in ∆13C. This response pattern suggests that trees prioritized maintaining photosynthetic processes over hydraulic safety, until a critical point. In contrast, P. trichocarpa showed a more gradual and sustained reduction in ∆13C, indicating that drought conditions induced stomatal closure and higher water use efficiency. This strategy may confer drought avoidance for P. trichocarpa while increasing its susceptibility to anticipated climate warming.

Carboxysomes: Green Solutions for Sustainable Agriculture and Renewable Energy

Carboxyomes are emerging as potential tools in the sustainable agriculture and biofuel production. They are proteinaceous organelles that are distributed in different species of photosynthetic bacteria and archaea and are significantly involved in carbon fixation. They enable the organisms to thrive in diverse environmental conditions and enhance the efficacy of photosynthesis. They have shown promising potential to address challenging regarding global food security, climate change and renewable energy. These nanocompartments encapsulate Ribulose-1,5-bisphosphate carboxylase/oxygenase (RuBisCO), an enzyme that catalyzes the first step of the Calvin-Benson-Bassham cycle that is a key pathway in carbon fixation. These specialized structures concentrate CO2 around RuBisCO ad shield it from the competing oxygen, thereby optimizing the efficiency of photosynthetic process and minimize wasteful photorespiration. The photosynthetic organisms having carboxysomes are therefore ideal candidates for sustainable agriculture as they are able to thrive in the harsh conditions such as low CO2 concentrations, water scarcity and high temperatures. They are recently being studied for enhancing the productivity and yield of crops. Efforts are being exerted to introduce carboxysome shell proteins and RuBisCO enzymes into crop genomes. Researchers are aiming to create plants with the ability to efficiently capture and utilize CO2 for photosynthesis. These genetically modified crops can potentially increase crop yields, improve water and nutrient efficiency significantly. Moreover, these carboxysomal transgenes are also able to enhance the resilience of GM plants to different environmental stressors such as drought and heat, and ultimately contribute to global food security and sustainable agriculture. In addition to their applications in agriculture, carboxysomes hold promise for biofuel production as well, as they are capable of carbon fixation. They have enabled researchers to engineer photosynthetic organisms to produce renewable fuels such as ethanol, biodiesel and hydrogen. Furthermore, nanobioreactors that are based on carboxysomes can contribute protectively against climate change as they have the potential to mitigate greenhouse gas emissions by capturing CO2 from industrial emissions and converting it into valuable bioproducts. This approach represents a promising avenue to address global challenges of food insecurity, climate crisis and rapidly declining non-renewable energy sources. If leveraged appropriately, these nanocompartments can significantly contribute in paving a way for more sustainable and resilient future.

Leaf Traits Explain the Growth Variation and Nitrogen Response of Eucalyptus urophylla × Eucalyptus grandis and Dalbergia odorifera in Mixed Culture.

Mixed cultivation with legumes may alleviate the nitrogen (N) limitation of monoculture Eucalyptus. However, how leaf functional traits respond to N in mixed cultivation with legumes and how they affect tree growth are unclear. Thus, this study investigated the response of leaf functional traits of Eucalyptus urophylla × Eucalyptus grandis (E. urophylla × E. grandis) and Dalbergia odorifera (D. odorifera) to mixed culture and N application, as well as the regulatory pathways of key traits on seedling growth. In this study, a pot-controlled experiment was set up, and seedling growth indicators, leaf physiology, morphological parameters, and N content were collected and analyzed after 180 days of N application treatment. The results indicated that mixed culture improved the N absorption and photosynthetic rate of E. urophylla × E. grandis, further promoting seedling growth but inhibiting the photosynthetic process of D. odorifera, reducing its growth and biomass. Redundancy analysis and path analysis revealed that leaf nitrogen content, pigment content, and photosynthesis-related physiological indicators were the traits most directly related to seedling growth and biomass accumulation, with the net photosynthetic rate explaining 50.9% and 55.8% of the variation in growth indicators for E. urophylla × E. grandis and D. odorifera, respectively. Additionally, leaf morphological traits are related to the trade-off strategy exhibited by E. urophylla × E. grandis and D. odorifera based on N competition. This study demonstrated that physiological traits related to photosynthesis are reliable predictors of N nutrition and tree growth in mixed stands, while leaf morphological traits reflect the resource trade-off strategies of different tree species.

Biogas Purification through the use of a Microalgae-Bacterial System in Semi-Industrial High Rate Algal Ponds.

In recent years, a number of technologies have emerged to purify biogas into biomethane. This purification entails a reduction in the concentration of polluting gases such as carbon dioxide and hydrogen sulfide to increase the content of methane. In this study, we used a microalgal cultivation technology to treat and purify biogas produced from organic waste from the swine industry to obtain ready-to-use biomethane. For cultivation and purification, two 22.2 m3 open-pond photobioreactors coupled with an absorption-desorption column system were set up in San Juan de los Lagos, Mexico. Several recirculation liquid/biogas ratios (L/G) were tested to obtain the highest removal efficiencies; other parameters, such as pH, dissolved oxygen (DO), temperature, and biomass growth, were measured. The most efficient L/Gs were 1.6 and 2.5, resulting in a treated biogas effluent with a composition of 6.8%vol and 6.6%vol in CO2, respectively, and removal efficiencies for H2S up to 98.9%, as well as maintaining O2 contamination values of less than 2%vol. We found that pH greatly determines CO2 removal, more so than L/G, during cultivation because of its participation in the photosynthetic process of microalgae and its ability to vary pH when solubilized due to its acidic nature. DO, and temperature oscillated as expected from the light-dark natural cycles of photosynthesis and the time of day, respectively. Biomass growth varied with CO2 and nutrient feeding as well as reactor harvesting; however, the trend remained primed for growth.

Combined miRNA and mRNA sequencing reveals the defensive strategies of resistant YHY15 rice against differentially virulent brown planthoppers.

The brown planthopper (BPH) poses a significant threat to rice production in Asia. The use of resistant rice varieties has been effective in managing this pest. However, the adaptability of BPH to resistant rice varieties has led to the emergence of virulent populations, such as biotype Y BPH. YHY15 rice, which carries the BPH resistance gene Bph15, exhibits notable resistance to biotype 1 BPH but is susceptible to biotype Y BPH. Limited information exists regarding how resistant rice plants defend against BPH populations with varying levels of virulence. In this study, we integrated miRNA and mRNA expression profiling analyses to study the differential responses of YHY15 rice to both avirulent (biotype 1) and virulent (biotype Y) BPH. YHY15 rice demonstrated a rapid response to biotype Y BPH infestation, with significant transcriptional changes occurring within 6 hours. The biotype Y-responsive genes were notably enriched in photosynthetic processes. Accordingly, biotype Y BPH infestation induced more intense transcriptional responses, affecting miRNA expression, defenserelated metabolic pathways, phytohormone signaling, and multiple transcription factors. Additionally, callose deposition was enhanced in biotype Y BPH-infested rice seedlings. These findings provide comprehensive insights into the defense mechanisms of resistant rice plants against virulent BPH, and may potentially guide the development of insect-resistant rice varieties.

Differential photosynthetic plasticity of Amazonian tree species in response to light environments.

To investigate how and to what extent there are differences in the photosynthetic plasticity of trees in response to different light environments, six species from three successional groups (late successional, mid-successional, and pioneers) were exposed to three different light environments [deep shade - DS (5% full sunlight - FS), moderate shade - MS (35% FS) and full sunlight - FS]. Maximum net photosynthesis (Amax), leaf N partitioning, stomatal, mesophile, and biochemical limitations (SL, ML, and BL, respectively), carboxylation velocity (Vcmax), and electron transport (Jmax) rates, and the state of photosynthetic induction (IS) were evaluated. Higher values of Amax, Vcmax, and Jmax in FS were observed for pioneer species, which invested the largest amount of leaf N in Rubisco. The lower IS for pioneer species reveals its reduced ability to take advantage of sunflecks. In general, the main photosynthetic limitations are diffusive, with SL and ML having equal importance under FS, and ML decreasing along with irradiance. The leaf traits, which are more determinant of the photosynthetic process, respond independently in relation to the successional group, especially with low light availability. An effective partitioning of leaf N between photosynthetic and structural components played a crucial role in the acclimation process and determined the increase or decrease of photosynthesis in response to the light conditions.

Dynamics and interplay of photosynthetic regulatory processes depend on the amplitudes of oscillating light.

Plants have evolved multiple regulatory mechanisms to cope with natural light fluctuations. The interplay between these mechanisms leads presumably to the resilience of plants in diverse light patterns. We investigated the energy-dependent nonphotochemical quenching (qE) and cyclic electron transports (CET) in light that oscillated with a 60-s period with three different amplitudes. The photosystem I(PSI) and photosystem II (PSII) function-related quantum yields and redox changes of plastocyanin and ferredoxin were measured in Arabidopsis thaliana wild types and mutants with partial defects in qE or CET. The decrease in quantum yield of qE due to the lack of either PsbS- or violaxanthin de-epoxidase was compensated by an increase in the quantum yield of the constitutive nonphotochemical quenching. The mutant lacking NAD(P)H dehydrogenase(NDH)-like-dependent CET had a transient significant PSI acceptor side limitation during the light rising phase under high amplitude of light oscillations. The mutant lacking PGR5/PGRL1-CET restricted electron flows and failed to induce effective photosynthesis control, regardless of oscillation amplitudes. This suggests that PGR5/PGRL1-CET is important for the regulation of PSI function in various amplitudes of light oscillation, while NDH-like-CET acts' as a safety valve under fluctuating light with high amplitude. The results also bespeak interplays among multiple photosynthetic regulatory mechanisms.

An efficient protocol for extracting thylakoid membranes and total leaf proteins from Posidonia oceanica and other polyphenol-rich plants

BackgroundThe extraction of thylakoids is an essential step in studying the structure of photosynthetic complexes and several other aspects of the photosynthetic process in plants. Conventional protocols have been developed for selected land plants grown in controlled conditions. Plants accumulate defensive chemical compounds such as polyphenols to cope with environmental stresses. When the polyphenol levels are high, their oxidation and cross-linking properties prevent thylakoid extraction.ResultsIn this study, we developed a method to counteract the hindering effects of polyphenols by modifying the grinding buffer with the addition of both vitamin C (VitC) and polyethylene glycol (PEG4000). This protocol was first applied to the marine plant Posidonia oceanica and then extended to other plants synthesizing substantial amounts of polyphenols, such as Quercus pubescens (oak) and Vitis vinifera (grapevine). Native gel analysis showed that photosynthetic complexes (PSII, PSI, and LHCII) can be extracted from purified membranes and fractionated comparably to those extracted from the model plant Arabidopsis thaliana. Moreover, total protein extraction from frozen P. oceanica leaves was also efficiently carried out using a denaturing buffer containing PEG and VitC.ConclusionsOur work shows that the use of PEG and VitC significantly improves the isolation of native thylakoids, native photosynthetic complexes, and total proteins from plants containing high amounts of polyphenols and thus enables studies on photosynthesis in various plant species grown in natural conditions.

Higher Plant-Derived Biostimulants: Mechanisms of Action and Their Role in Mitigating Plant Abiotic Stress.

Modern agriculture is being challenged by deteriorating edaphoclimatic conditions and increasing anthropogenic pressure. This necessitates the development of innovative crop production systems that can sustainably meet the demands of a growing world population while minimizing the environmental impact. The use of plant biostimulants is gaining ground as a safe and ecologically sound approach to improving crop yields. In this review, biostimulants obtained from different higher plant sources are presented under the term higher plant-derived biostimulants (hPDBs). Their mechanisms of action regulate physiological processes in plants from germination to fructification, conditioned by responses induced in plant mineral nutrition and primary metabolism, specialized metabolism, photosynthetic processes, oxidative metabolism, and signaling-related processes. The aim of this review is to collect and unify the abundant information dispersed in the literature on the effects of these biostimulants, focusing on crops subjected to abiotic stress conditions and the underlying mechanisms of action.

Proteinaceous Microsphere-Based Water-in-Oil Pickering Emulsions for Preservation of Chlorella Cells.

Microalgae are highly regarded as ideal materials for the creation of liquid biofuels and have substantial potential for growth and utilization. However, traditional storage and culture methods for microalgae are plagued by challenges such as uncontrolled growth, bacterial contamination, and self-shading among algae. These issues severely impede the photosynthetic process and the efficient extraction of biomass energy. This study tackles these problems by utilizing magnetic hydrophobic protein particles to stabilize water-in-oil Pickering emulsions. This allows for the micro-compartment storage and magnetic transfer of algae. Additionally, the successful encapsulation of Chlorella cells in high-internal-phase water-in-oil Pickering emulsions effectively mitigates the settling problem of Chlorella cells in the liquid phase, thereby enabling the potential use of Pickering emulsions for the confined cultivation of microalgae.

Electric Field Susceptibility of Chlorophyll c Leads to Unexpected Excitation Dynamics in the Major Light-Harvesting Complex of Diatoms.

Diatoms are one of the most abundant photosynthetic organisms on earth and contribute largely to atmospheric oxygen production. They contain fucoxanthin and chlorophyll-a/c binding proteins (FCPs) as light-harvesting complexes with a remarkable adaptation to the fluctuating light on ocean surfaces. To understand the basis of the photosynthetic process in diatoms, the excitation energy funneling within FCPs must be probed. A state-of-the-art multiscale analysis within a quantum mechanics/molecular mechanics framework has been employed. To this end, the chlorophyll (Chl) excitation energies within the FCP complex from the diatom Phaeodactylum tricornutum have been determined. The Chl-c excitation energies were found to be 5-fold more susceptible to electric fields than those of Chl-a pigments and thus are significantly lower in FCP than in organic solvents. This finding challenges the general belief that the excitation energy of Chl-c is always higher than that of Chl-a in FCP proteins and reveals that Chl-c molecules are much more sensitive to electric fields within protein scaffolds than in Chl-a pigments. The analysis of the linear absorption spectrum and the two-dimensional electronic spectra of the FCP complex strongly supports these findings and allows us to study the excitation transfer within the FCP complex.

A novel hybrid modelling framework for GPP estimation: Integrating a multispectral surface reflectance based [formula omitted] simulator into the process-based model

Terrestrial gross primary productivity (GPP) is the key element in the carbon cycle process. Accurate GPP estimation hinges on the maximum carboxylation rate (Vcmax,025). The high uncertainty in deriving ecosystem-level Vcmax,025 has long hampered efforts toward the performance of the GPP model. Recently studies suggest the strong relationship between spectral reflectance and Vcmax,025. We proposed the multispectral surface reflectance-driven Vcmax,025 simulator using the fully connected deep neural network and built the hybrid modelling framework for GPP estimation by integrating the data-driven Vcmax,025 simulator in the process-based model. The performance of hybrid GPP model was evaluated at 95 flux sites. The result shows that the multispectral surface reflectance-driven Vcmax,025 simulator acquires the satisfactory estimation, with correlation coefficient (R), root mean square error (RMSE) and median absolute percentage error (MdAPE) ranging from 0.34 to 0.80, 14 to 43 μmol m−2 s−1 and 21 % to 66 % across different land cover types, respectively. The hybrid framework generates good GPP estimates with R, RMSE and MdAPE varying from 0.76 to 0.89, 1.79 to 6.16 μmol m−2 s−1 and 27 % to 90 %, respectively. Compared with EVI-driven method, the multispectral surface reflectance significantly improves the Vcmax,025 and GPP estimates, with MdAPE declining by 0.6 %–18 % and 1 % to 21 %, respectively. The Shapley value analysis reveals that red (620–670 nm), near-infrared (841–876 nm) and shortwave infrared (1628–1652 nm and 2105–2155 nm) are the key bands for Vcmax,025 estimation. This study highlights the potential of multispectral surface reflectance for quantifying ecosystem-level Vcmax,025. The new hybrid framework fully extracts the information of all available spectral bands using deep learning to reduce parameter uncertainty while maintains the description of photosynthetic process to ensure its physical reasonability. It can serve as a powerful tool for accurate global GPP estimation.

Zeolite enhances leaf photosynthesis and fruit quality in tomato through greenhouse CO2 enrichment

Elevated CO2 concentration has been widely acknowledged as a leading factor to global climate change, while deficient CO2 serves as a crucial limiting factor in modern greenhouse production. Harnessing the existing excessive CO2 to promote agriculture production is significant but filled with challenges. To this end, we proposed a concentration gradient-regulated CO2 enrichment system for capturing CO2 into greenhouses, which requires suitable CO2 sorbents with sufficient CO2 desorption capacity and high hydrophobicity at ambient temperature and pressure. Zeolites with different framework types and cations were detected by CO2 desorption and cyclic stability test under simulated agricultural production conditions. The results indicate that larger pore volume cooperated with higher Si/Al ratio and weaker alkali cations may be critical determinants for balancing high CO2 adsorption-desorption capacities and hydrophobicity in crop-cultivated environments. H-SSZ-13 zeolite is identified as the potential sorbents and exhibits exceptional CO2 release abilities and cyclic stability in tomato-grown environment. Long-term application of H-SSZ-13 zeolite to tomato plants significantly stimulated photosynthetic processes, particularly the Calvin-Benson cycle, culminating in notable improvements in plant growth, fruit yield and quality. This investigation provides a promising solution to develop a carbon-neutral CO2 enrichment system for both sustainable and productive greenhouse production.

Corals nitrogen and carbon isotopic signatures alters under Artificial Light at Night (ALAN)

This study examines the impact of Artificial Light at Night (ALAN) on two coral species, Acropora eurystoma and Pocillopora damicornis, in the Gulf of Aqaba/Eilat Red Sea, assessing their natural isotopic responses to highlight changes in energy and nutrient sourcing due to sensory light pollution. Our findings indicate significant disturbances in photosynthetic processes in Acropora eurystoma, as evidenced by shifts in δ13C values under ALAN, pointing to alterations in carbon distribution or utilization. In Pocillopora damicornis, similar trends were observed, with changes in δ13C and δ15N values suggesting a disruption in its nitrogen cycle and feeding strategies.The study also uncovers species-specific variations in heterotrophic feeding, a crucial factor in coral resilience under environmental stress, contributing to the corals' fixed carbon budget. Light measurements across the Gulf demonstrated a gradient of light pollution which possess the potential of affecting marine biology in the region. ALAN was found to disrupt natural diurnal tentacle behaviors in both coral species, crucial for prey capture and nutrient acquisition, thereby impacting their isotopic composition and health.Echoing previous research, our study underscores the need to consider each species' ecological and physiological contexts when assessing the impacts of anthropogenic changes. The findings offer important insights into the complexities of marine ecosystems under environmental stress and highlight the urgency of developing effective mitigation strategies.

The impact of sea ice melt on the evolution of surface pCO2 in a polar ocean basin

The impact of sea ice melt on the evolution of surface pCO2 in a polar ocean basin

Effect of cryptochrome 1 deficiency and spectral composition of light on photosynthetic processes in A. thaliana under high-intensity light exposure

Effect of cryptochrome 1 deficiency and spectral composition of light on photosynthetic processes in A. thaliana under high-intensity light exposure

Characteristics of powdery mildew [Sawadaea bicornis (Wallr.) Miyabe] influence on the photosynthetic process in Norway maple (Acer platanoides L.) seedlings

Characteristics of powdery mildew [Sawadaea bicornis (Wallr.) Miyabe] influence on the photosynthetic process in Norway maple (Acer platanoides L.) seedlings