This study incorporated ZnO/ZnS nanoparticles with Rhodobacter capsulatus SB1003, forming a hybrid system to promote photo-fermentative hydrogen production. The results indicate that the material’s photocatalytic activity and concentration significantly affected hydrogen yield. The addition of ZnO/ZnS exhibited a more significant auxiliary effect than ZnO and achieved an approximately 30% increase in hydrogen production compared to the control group. ZnO/ZnS enhanced the production of extracellular polymers, thereby strengthening the synergy between the nanomaterials and the bacteria. The photogenerated electrons from ZnO/ZnS were utilized by the photosynthetic bacteria. Furthermore, the activity of nitrogenase was enhanced, resulting in improved hydrogen production performance. This study provides insights into hydrogen production by photosynthetic bacteria with the assistance of inorganic semiconductor nanomaterials.