Phospholipid Fatty Acid Research Articles

Biodegradation of aliphatic polyurethane foams in soil: Influence of amide linkages and supramolecular structure

Polyurethane (PU) foams are classified as physically nonrecyclable thermosets. The current effort of sustainable and eco-friendly production makes it essential to explore methods of better waste management, for instance by modifying the structure of these frequently used polymers to enhance their microbial degradability. The presence of ester links is known to be a crucial prerequisite for the biodegradability of PU foams. However, the impact of other hydrolysable groups (urethane, urea and amide) occurred in PU materials, as well as the supramolecular structure of the PU network and the cellular morphology of PU foams, is still relatively unexplored.In this work, fully aliphatic PU foams with and without hydrolyzable amide linkages were prepared and their aerobic biodegradation was investigated using a six-month soil burial test. Besides the variable chemical composition of the PU foams, the influence of their different supramolecular arrangement and cellular morphologies on the extent of biodegradation was also evaluated. Throughout the soil burial test, the release of carbon dioxide, and enzyme activities of proteases, esterases, and ureases were measured. At the same time, phospho-lipid fatty acids (PLFA) analysis was conducted together with an assessment of microbial community composition achieved by analysing the genetic information from the 16S rRNA gene and ITS2 region sequencing.The results revealed a mineralization rate of 30–50 % for the PU foams, indicating a significant level of degradation as well as indicating that PU foams can be utilized by soil microorganisms as a source of both energy and nutrients. Importantly, microbial biomass remained unaffected, suggesting that there was no toxicity associated with the degradation products of the PU foams. It was further confirmed that ester linkages in PU foam structure were easily enzymatically cleavable, while amide linkages were not prone to degradation by soil microorganisms. In addition, it was shown that the presence of amide linkages in PU foam leads to a change in the supramolecular network arrangement due to increased content of hard segments, which in turn reduces the biodegradability of PU foam. These findings show that it is important to consider both chemical composition and supramolecular/macroscopic structure when designing new PU materials in an effort to develop environmentally friendly alternatives.

Microbial regulation of aggregate stability and carbon sequestration under long-term conservation tillage and nitrogen application

The stability of aggregates plays a significant role in soil organic carbon (SOC) sequestration in conservation agriculture soils. However, the regulation of microorganisms within aggregates on aggregate stability and SOC sequestration remains elusive. By dividing the soil into three aggregate size classes [mega-aggregates (>2000 μm), macro-aggregates (250–2000 μm), and micro-aggregates (<250 μm)], we evaluated the response of aggregate stability, SOC and microbial communities within aggregates to long-term conservation tillage, which consisted of two tillage methods (conventional tillage and no-tillage) and three nitrogen application rates (105, 180, and 210 kg N ha−1). Under no-tillage treatment, high nitrogen application rate increased SOC by 2.1–3.7 g·kg−1 within mega- and macro-aggregates but reduced the total amount of phospholipid fatty acids (PLFAs) within all aggregates. Under conventional tillage, high N application rate increased mean weight diameter (MWD) and reduced total PLFAs within all aggregates only in 0–10 cm. With the same nitrogen application rate, no-tillage increased MWD by 8.7 %–42.7 %, SOC content within mega-aggregates by 7.3 %–27.8 % and within macro-aggregates by 13.2 %–28.3 % when compared with conventional tillage. Actinobacteria were recruited by straw under no-tillage and their biomass increased 1.5–7.8 times in all aggregates compared with conventional tillage, where they might participate in aggregate formation via degradation of straw and increasing SOC within mega- and macro-aggregates. Conversely, desulfovibrio biomass within all aggregates was diminished under no-tillage compared with conventional tillage, while desulfovibrio possibly directly inhibited soil aggregate formation and decreased SOC within mega- and macro-aggregates under conventional tillage. Moreover, under no-tillage, arbuscular mycorrhizal fungi biomass increased by 0.4–1.6 nmol g−1 within all aggregates compared with conventional tillage in 0–10 cm, potentially indirectly contributing to soil aggregate formation via co-metabolic processes and increasing SOC within mega- and macro-aggregates. Overall, high nitrogen application under long-term no-tillage protects SOC within mega-aggregates by altering aggregate formation through the microbial communities, providing information that may be useful in developing management strategies to enhance carbon sequestration in agricultural soils.

A pulse of simulated root exudation alters the composition and temporal dynamics of microbial metabolites in its immediate vicinity

Root exudation increases the concentration of readily available carbon (C) compounds in its immediate environment. This creates ‘hotspots’ of microbial activity characterized by accelerated soil organic matter turnover with direct implications for nutrient availability for plants. However, our knowledge of the microbial metabolic processes occurring in the immediate vicinity of roots during and after a root exudation event is still limited.Using reverse microdialysis, we simulated root exudation by releasing a13C-labelled mix of low-molecular-weight organic C compounds at mm-sized locations in undisturbed soil. Combined with stable isotope tracing, we investigated the fine-scale temporal and spatial response of microbial metabolism, soil chemistry, and traced microbial respiration and uptake of exuded compounds.Our results show that a 9-h simulated root exudation pulse leads to i) a large local respiration event and ii) alteration of the temporal dynamics of soil metabolites over the following 12 day at the exudation spot. Notably, we observed a threefold increase in ammonium concentrations at 12 h and increased nitrate concentrations five days after the pulse. Moreover, various short-chain fatty acids (acetate, propionate, formate) increased over the following days, indicating altered microbial metabolic pathways and activity. Phospholipid and neutral lipid fatty acids (PLFAs, NLFAs) of all major microbial groups were significantly 13C-enriched within a 5 mm radius around the microdialysis probes, but not beyond. The highest relative 13C enrichment was observed in fungal NLFAs, indicating that a significant proportion of the exuded compounds had been incorporated into fungal storage compounds.Our findings indicate that the punctual release of low-molecular-weight organic C compounds into intact soil significantly changes microbial metabolism and activity in its immediate surroundings, enhancing mineralization of native organic nitrogen. This highlights the versatility of microbial metabolic pathways in response to rapidly changing C availability and their effectiveness in increasing nutrient availability near plant roots.

Abstract A104: ADAR1-associated metabolic vulnerabilities in triple-negative breast cancer

Abstract Triple-negative breast cancer (TNBC), lacking expression of estrogen, progesterone, and HER2 receptors, is aggressive and lacks targeted treatment options. Therefore, the mission to identify actionable targets remains the top priority. We recently demonstrated that an RNA editing enzyme, adenosine deaminase acting on RNA 1 (ADAR1), plays important roles in TNBC’s ability to initiate and maintain tumorigenesis. We posit that ADAR1 functions as a homeostatic factor protecting TNBC from stresses when otherwise kept in check, contributing to tumorigenesis. By both targeted and unbiased approaches, we identified two metabolic vulnerabilities, 1) iron-dependent cell death pathway, ferroptosis, and 2) serine addiction, associated with ADAR1 in TNBC. By performing single-reaction monitoring-based liquid chromatography coupled to mass spectrometry (LC-MS) to measure intracellular lipid contents, we showed that ADAR1 loss in TNBC cells increased the abundance of polyunsaturated fatty acid phospholipids (PUFA-PL), of which peroxidation is the primary driver of ferroptosis. Transcriptomic analysis and phenotypic drug screen using a ferroptosis-focused library were performed to identify underlying mechanisms and drug candidates synergizing with ADAR1 loss through ferroptosis, respectively. Meanwhile, an unbiased screen using a FDA-approved compound library revealed that ADAR1 loss also sensitizes TNBC cell line MDA-MB231 to inhibition of the serine biosynthesis pathway. We showed that ADAR1 knockdown leads to altered serine transport, and a metabolic flux analysis using labeled (U-13C) glucose will be performed to determine if ADAR1 loss affects de novo serine biosynthesis and one-carbon metabolism. By testing the hypothesis that ADAR1 regulates the metabolic fitness of TNBC by desensitizing ferroptosis and serine addiction, we aim to leverage these metabolic vulnerabilities to inform basic, pre-clinical, and clinical studies to develop novel therapeutic strategies for TNBC. Citation Format: Che-Pei Kung, Leah P Shriver, Nick Terzich, Ma Xenia G Ilagen, Mike Prinsen, Sua Ryu, Raleigh D Kladney, Gary J Patti, Leonard B Maggi, Jason D Weber. ADAR1-associated metabolic vulnerabilities in triple-negative breast cancer [abstract]. In: Proceedings of the AACR-NCI-EORTC Virtual International Conference on Molecular Targets and Cancer Therapeutics; 2023 Oct 11-15; Boston, MA. Philadelphia (PA): AACR; Mol Cancer Ther 2023;22(12 Suppl):Abstract nr A104.

Comprehensive identification and functional characterization of GhpPLA gene family in reproductive organ development

BackgroundPhospholipases As (PLAs) are acyl hydrolases that catalyze the release of free fatty acids in phospholipids and play multiple functions in plant growth and development. The three families of PLAs are: PLA1, PLA2 (sPLA), and patatin-related PLA (pPLA). The diverse functions that pPLAs play in the growth and development of a broad range of plants have been demonstrated by prior studies.MethodsGenome-wide analysis of the pPLA gene family and screening of genes for expression verification and gene silencing verification were conducted. Additionally, pollen vitality testing, analysis of the pollen expression pattern, and the detection of POD, SOD, CAT, MDA, and H2O2 were performed.ResultIn this study, 294 pPLAs were identified from 13 plant species, including 46 GhpPLAs that were divided into three subfamilies (I-III). Expression patterns showed that the majority of GhpPLAs were preferentially expressed in the petal, pistil, anther, and ovule, among other reproductive organs. Particularly, GhpPLA23 and GhpPLA44, were found to be potentially important for the reproductive development of G. hirsutum. Functional validation was demonstrated by VIGS which showed that reduced expression levels of GhpPLA23 and GhpPLA44 in the silenced plants were associated with a decrease in pollen activity. Moreover, a substantial shift in ROS and ROS scavengers and a considerable increase in POD, CAT, SOD, and other physiological parameters was found out in these silenced plants. Our results provide plausibility to the hypothesis that GhpPLA23 and GhpPLA44 had a major developmental impact on cotton reproductive systems. These results also suggest that pPLAs are important for G. hirsutum’s reproductive development and suggest that they could be employed as potential genes for haploid induction.ConclusionsThe findings of the present research indicate that pPLA genes are essential for the development of floral organs and sperm cells in cotton. Consequently, this family might be important for the reproductive development of cotton and possibly for inducing the plant develop haploid progeny.

Dynamics of Docosahexaenoic Acid Utilization by Mouse Peritoneal Macrophages.

In this work, the incorporation of docosahexaenoic acid (DHA) in mouse resident peritoneal macrophages and its redistribution within the various phospholipid classes were investigated. Choline glycerophospholipids (PC) behaved as the major initial acceptors of DHA. Prolonged incubation with the fatty acid resulted in the transfer of DHA from PC to ethanolamine glycerophospholipids (PE), reflecting phospholipid remodeling. This process resulted in the cells containing similar amounts of DHA in PC and PE in the resting state. Mass spectrometry-based lipidomic analyses of phospholipid molecular species indicated a marked abundance of DHA in ether phospholipids. Stimulation of the macrophages with yeast-derived zymosan resulted in significant decreases in the levels of all DHA-containing PC and PI species; however, no PE or PS molecular species were found to decrease. In contrast, the levels of an unusual DHA-containing species, namely PI(20:4/22:6), which was barely present in resting cells, were found to markedly increase under zymosan stimulation. The levels of this phospholipid also significantly increased when the calcium-ionophore A23187 or platelet-activating factor were used instead of zymosan to stimulate the macrophages. The study of the route involved in the synthesis of PI(20:4/22:6) suggested that this species is produced through deacylation/reacylation reactions. These results define the increases in PI(20:4/22:6) as a novel lipid metabolic marker of mouse macrophage activation, and provide novel information to understand the regulation of phospholipid fatty acid turnover in activated macrophages.

Crystalline silica-induced proinflammatory eicosanoid storm in novel alveolar macrophage model quelled by docosahexaenoic acid supplementation.

Phagocytosis of inhaled crystalline silica (cSiO2) particles by tissue-resident alveolar macrophages (AMs) initiates generation of proinflammatory eicosanoids derived from the ω-6 polyunsaturated fatty acid (PUFA) arachidonic acid (ARA) that contribute to chronic inflammatory disease in the lung. While supplementation with the ω-3 PUFA docosahexaenoic acid (DHA) may influence injurious cSiO2-triggered oxylipin responses, in vitro investigation of this hypothesis in physiologically relevant AMs is challenging due to their short-lived nature and low recovery numbers from mouse lungs. To overcome these challenges, we employed fetal liver-derived alveolar-like macrophages (FLAMs), a self-renewing surrogate that is phenotypically representative of primary lung AMs, to discern how DHA influences cSiO2-induced eicosanoids. We first compared how delivery of 25 µM DHA as ethanolic suspensions or as bovine serum albumin (BSA) complexes to C57BL/6 FLAMs impacts phospholipid fatty acid content. We subsequently treated FLAMs with 25 µM ethanolic DHA or ethanol vehicle (VEH) for 24h, with or without LPS priming for 2h, and with or without cSiO2 for 1.5 or 4h and then measured oxylipin production by LC-MS lipidomics targeting for 156 oxylipins. Results were further related to concurrent proinflammatory cytokine production and cell death induction. DHA delivery as ethanolic suspensions or BSA complexes were similarly effective at increasing ω-3 PUFA content of phospholipids while decreasing the ω-6 PUFA arachidonic acid (ARA) and the ω-9 monounsaturated fatty acid oleic acid. cSiO2 time-dependently elicited myriad ARA-derived eicosanoids consisting of prostaglandins, leukotrienes, thromboxanes, and hydroxyeicosatetraenoic acids in unprimed and LPS-primed FLAMs. This cSiO2-induced eicosanoid storm was dramatically suppressed in DHA-supplemented FLAMs which instead produced potentially pro-resolving DHA-derived docosanoids. cSiO2 elicited marked IL-1α, IL-1β, and TNF-α release after 1.5 and 4h of cSiO2 exposure in LPS-primed FLAMs which was significantly inhibited by DHA. DHA did not affect cSiO2-triggered death induction in unprimed FLAMs but modestly enhanced it in LPS-primed FLAMs. FLAMs are amenable to lipidome modulation by DHA which suppresses cSiO2-triggered production of ARA-derived eicosanoids and proinflammatory cytokines. FLAMs are a potential in vitro alternative to primary AMs for investigating interventions against early toxicant-triggered inflammation in the lung.

Response of Organic Carbon Mineralization to Nitrogen Addition in Micro-aerobic and Anaerobic Layers of Paddy Soil

In field conditions, a micro-aerobic layer with 1 cm thickness exists on the surface layer of paddy soil owing to the diffusion of dissolved oxygen via flooding water. However, the particularity of carbon and nitrogen transformation in this specific soil layer is not clear. A typical subtropical paddy soil was collected and incubated with13C-labelled rice straw for 100 days. The responses of exogenous fresh organic carbon(13C-rice straw) and original soil organic carbon mineralization to nitrogen fertilizer addition[(NH4)2SO4]in the micro-aerobic layer(0-1 cm) and anaerobic layer(1-5 cm) of paddy soil and their microbial processes were analyzed based on the analysis of 13C incorporation into phospholipid fatty acid(13C-PLFAs). Nitrogen addition promoted the total CO2 and 13C-CO2 emission from paddy soil by 11.4% and 12.3%, respectively. At the end of incubation, with the addition of nitrogen, the total soil organic carbon (SOC) and13C-recovery rate from rice straw in the anaerobic layer were 2.4% and 9.2% lower than those in the corresponding micro-aerobic layer, respectively. At the early stage(5 days), nitrogen addition increased the total microbial PLFAs in the anaerobic layer with a consistent response of bacterial and fungal PLFAs. However, there was no significant effect from nitrogen on microbial abundance in the micro-aerobic layer. Nitrogen addition had no significant impact on the abundance of total 13C-PLFAs in the micro-aerobic and anaerobic layers, but the abundance of 13C-PLFAs for bacteria and fungi in the micro-aerobic layer was decreased dramatically. At the late stage(100 days), the effect of nitrogen addition on microbial PLFAs was consistent with that at the early stage. The abundances of total, bacterial, and fungal 13C-PLFAs were remarkably increased in the anaerobic layer. However, the abundance of 13C-PLFAs in the micro-aerobic layer showed no significant response to nitrogen addition. During the incubation, the content of NH4+-N in the anaerobic soil layer was higher than that in the micro-aerobic soil layer. This indicates that nitrogen addition increased microbial activity in the anaerobic soil layer caused by the higher NH4+-N concentration, as majority of microorganisms preferred to use NH4+-N. Consequently, the microbial utilization and decomposition of organic carbon in the anaerobic soil layer were accelerated. By contrast, richer available N existed in the form of NO3--N in the micro-aerobic soil layer owing to the ammoxidation process. Thus, the shortage of NO3--N preference microorganisms in the paddy soil environment prohibited the microbial metabolism of organic carbon in the micro-aerobic layer. As a whole, nitrogen fertilization enhanced organic carbon loss via microbial mineralization in paddy soil with a weaker effect in the micro-aerobic layer than that in the anaerobic layer, indicating the limited microbial metabolic activity in the surface micro-aerobic layer could protect the organic carbon stabilization in paddy soil. This study emphasizes the heterogeneity of paddy soil and its significant particularity of carbon and nitrogen transformation in micro-aerobic layers. Consequently, this study has implications for optimizing the forms and method for the application of nitrogen fertilizer in paddy cropping systems.

Effect of moss removal on soil multifunctionality during vegetation restoration in subtropical ecosystems

Mosses are multifunctional communities that are increasingly recognized as potential and sustainable resources to restore degraded ecosystems. However, available information is limited on the influence of mosses on soil multifunctionality during vegetation restoration in subtropical ecosystems. We investigated the effects of mosses on soil multifunctionality and four single functions in three vegetation restoration approaches (monoculture plantations, monoculture forage grasses and intercropping of trees and forage grasses) by conducting a moss removal and retention experiment. Moss removal decreased soil multifunctionality and the single functions of nutrient provisioning, water retention and plant–microbe symbiosis, particularly in monoculture plantations, in the 0–5 cm soil layer. Moss removal decreased the phospholipid fatty acid abundance of soil microbes (e.g., bacteria, Gram-negative bacteria and general fungi) in the 2–5 cm soil layer but had nonsignificant effects on the nematode community. Random forest analysis showed that moss properties were more important factors than the soil physicochemical, microbial and nematode properties linked to soil multifunctionality. Moss properties (diversity, thickness, biomass, carbon and nitrogen concentrations, carbon to nitrogen ratio, biological nitrogen fixation rate and saturated water absorption content) were positively associated with soil multifunctionality, nutrient provisioning, water retention and plant–microbe symbiosis. These findings highlight the importance of preserving mosses to maintain soil multifunctionality during vegetation restoration in degraded subtropical ecosystems, especially in monoculture plantations.

Long-term fertilization affects microbial necromass accumulation by regulating nutrient and enzymatic stoichiometry in a calcareous Fluvisol

Microbial necromass accumulation through rhizodeposition plays a critical role in increasing the stable soil organic carbon pool, which is greatly affected by fertilization. However, the legacy effects of long-term fertilization on microbial necromass accumulation remain unclear. Here, we selected a calcareous Fluvisol treated with no fertilizer (Ctrl), P and K fertilizers (PK), N and K fertilizers (NK), and N, P and K fertilizers (NPK) for 34 years and conducted a 12-week microcosm experiment with simulated daily rhizodeposition to disentangle the legacy effects of long-term fertilization on microbial necromass accumulation. We measured soil C, N and P contents and C-, N- and P-acquiring extracellular enzyme activities and analyzed phospholipid fatty acids (PLFAs) and amino sugars to indicate microbial biomass and necromass, respectively. We found that compared with the Ctrl and NK treatments, the PK and NPK treatments significantly decreased the C:N and C:P ratios and the net accumulation of microbial necromass but significantly increased the ratios of C- to N- and C- to P-acquiring enzyme activities and the fungal PLFAs abundance in soils. The net accumulation of microbial necromass was positively correlated with soil nutrient stoichiometry (mainly the C:N and C:P ratios) but negatively correlated with soil enzymatic stoichiometry (mainly the ratios of C- to N- and C- to P-acquiring enzyme activities) and the fungal to bacterial PLFA ratio. Taken together, these results suggest that long-term fertilization has legacy effects on microbial necromass accumulation and that fertilization-induced changes in nutrient and enzymatic stoichiometry regulate microbial necromass accumulation through rhizodeposition in the calcareous Fluvisol.

Effect of lysophospholipids on the growth performance, nutrient digestibility, lipid metabolism and meat quality of fattening rabbits

ABSTRACT The present study aimed to investigate the effect of emulsifier lysophospholipids (LP), enzymatically modified from soy phospholipids, on the growth performance, nutrient digestibility, lipid metabolism and meat quality of fattening rabbits. The LP was added in control (CON), LP1, LP2 and LP3 at 0, 200, 400 and 600 mg/kg, respectively. A total of 240 rabbits at approximately 52 d of age were divided into 4 groups with 6 replicates of 10 rabbits each. The feeding trial lasted for 42 d. Results showed that compared to CON, LP1, LP2 and LP3 increased (p < 0.05) body weight gain, feed efficiency, the apparent faecal digestibility of gross energy, crude protein and ether extract, the percentages of dissectible fat and ether extract in the longissimus and legs, the serum contents of apolipoprotein B, free fatty acid and total phospholipids in the longissimus, but decreased (p < 0.05) serum total triglyceride and total cholesterol. Meanwhile, LP1, LP2 and LP3 had higher (p < 0.05) carcass weight, longissimus weight and percentages of foreleg and hindleg than the CON; and the three LP diets also increased (p < 0.05) the tenderness, lightness and redness of longissimus. It is concluded that soy LP as an emulsifier can improve the growth, digestibility and meat quality of fattening rabbits.

Fertilization can accelerate the pace of soil microbial community response to rest-grazing duration in the three-river source region of China.

Overgrazing leads to grassland degradation and productivity decline. Rest-grazing during the regreen-up period can quickly restore grassland and fertilization is a common restoration strategy. However, the effects of rest-grazing time and fertilization on soil microorganisms are unclear in the alpine grasslands. Therefore, the experiment of rest-grazing time and fertilization was carried out to explore the response of soil microorganisms to rest-grazing time and fertilization measures. A field control experiment with rest-grazing time and fertilization as factors have been conducted from the time when grass returned to green till the livestock moved to the summer pasture in Dawu Town of Maqin County of China. The primary treatment we established was the five rest-grazing time, including rest-grazing time of 20 days, 30 days, 40 days, 50 days, and traditional grazing was used as a check group. At the same time, the secondary treatment was nitrogen addition of 300 kg·hm-2 in each primary treatment. The results showed that the total phospholipid fatty acid (total PLFA), actinomyces (Act), and arbuscular mycorrhizal fungi (AMF) showed an ever-increasing biomass with the increase of rest-grazing time and the highest was at 50 days of rest-grazing, and they were all significantly higher than CK. In addition, soil microbial biomass carbon-nitrogen ratio (MBC/MBN) had great influence on the change of microbial community. Applying nitrogen fertilizer can increase the maximum value of biomass of all PLFA groups and the biomass of all PLFA groups changed in an "inverted V" shape with the increase of rest-grazing time. Besides, instead of MBC/MBN, NO3 --N was positively correlated with the biomass of all PLFA groups, which actively regulated the trend of microbial functions. The longer rest-grazing time is more conducive to the biomass of all PLFA groups. However, applying nitrogen fertilizer could break this pattern, namely, the 30 days rest-grazing would be beneficial to the biomass of all PLFA groups. These findings provide key information that rest-grazing during the regreen-up period is benefiscial to the all PLFA groups and fertilization could change the response of microorganisms to rest-grazing, which provide reference measures for the restoration of degraded alpine meadows.

Adaptation of the metolachlor-degrading fungus Trichoderma harzianum to the simultaneous presence of low-density polyethylene (LDPE) microplastics

Although it is known that microplastics (MPs) in soils cause a threat to this complex environment, the actual effects of MPs on soil microorganisms and their catabolic activities, particularly with the biodegradation of herbicides, remain unclear. Hence, the objective of this study was to investigate the effects of a simultaneous presence of metolachlor and low-density polyethylene (LDPE) microplastics on growth inhibition and adaptive responses of Trichoderma harzianum in soil microcosms. Using ergosterol content as an indicator of fungal biomass, it was observed that MPs alone had a marginal inhibitory effect on the growth of the fungus, whereas MET exhibited a dose-dependent inhibitory effect on T. harzianum. However, the presence of MPs did not influence the fungal transforming activity toward the herbicide. Conversely, analysis of lipid profiles in the presence of MPs and herbicides revealed a reduction in the overall fluidity of phospholipid fatty acids, primarily attributed to an increase in lysophospholipids. The activities of six extracellular enzymes in the soil, measured using methylumbelliferone-linked substrates, were significantly enhanced in the presence of MET. These findings contribute to a broader understanding of the alterations in fungal activity in soil resulting from the influence of MPs and MET.

Divergent Responses of Temperature Sensitivity to Rising Incubation Temperature in Warmed and Un-Warmed Soil: A Mesocosm Experiment from a Subtropical Plantation

We conducted a short-term laboratory soil warming incubation experiment, sampling both warmed and un-warmed soils from a subtropical plantation in southeastern China, incubating them at 20 °C, 30 °C, and 40 °C. Our aim was to study the SOC mineralization response to increasing temperatures. Our findings revealed that the temperature sensitivity (Q10) of SOC mineralization to short-term experimental warming varied between the warmed soil and the un-warmed soil. The Q10 of the un-warmed soil escalated with the temperature treatment (20–30 °C: 1.31, 30–40 °C: 1.63). Conversely, the Q10 of the warmed soil decreased (20–30 °C: 1.57, 30–40 °C: 1.41). Increasing temperature treatments decreased soil substrate availability (dissolved organic C) in both un-warmed and warmed soil. The C-degrading enzyme in un-warmed soil and warmed soil had different trends at different temperatures. In addition, warming decreased soil microbial biomass, resulting in a decrease in the total amount of phospholipid fatty acids (PLFAs) and a decrease in the abundance of fungi and Gram-negative bacteria (GN) in both un-warmed and warmed soil. The ratio of fungal to bacterial biomass (F:B) in un-warming soil was significantly higher than that in warmed soil. A drop in the microbial quotient (qMBC) coupled with a rise in the metabolic quotient (qCO2) indicated that warming amplified microbial respiration over microbial growth. The differential Q10 of SOC mineralization in un-warmed and warmed soil, in response to temperature across varying soil, can primarily be attributed to shifts in soil dissolved organic C (DOC), alterations in C-degrading enzyme activities, and modifications in microbial communities (F:B).

Microbial activity, community composition and degraders in the glyphosate-spiked soil are driven by glycine formation

Widely-used glyphosate may produce aminomethylphosphonic acid (AMPA), glycine and sarcosine. To date, little is known about effects of these degradation products on soil microorganisms and their potential degraders. Here, we incubated a soil spiked either with 2-13C-glyphosate, 13C-AMPA, 13C3-sarcosine or 13C2-glycine for 75 days. Respiration (CO2 tot) and mineralization rates of the compound (13CO2) were estimated in addition to phospholipid fatty acids (PLFAstot and 13C-PLFAs) as biomarkers to identify four groups of microorganisms (Gram-negative & Gram-positive bacteria, actinobacteria, fungi). 16S/ITS rRNA amplicon sequencing was also conducted to identify the microbial community at the phylum and genus level. The CO2 tot and 13CO2 rates were highest on day 2 in all treatments, as follows: glycine (CO2 tot: 1.09 μmol g−1; 13CO2: 18 %) > sarcosine (CO2 tot: 0.89 μmol g−1; 13CO2: 8.5 %) > glyphosate (CO2 tot: 0.67 μmol g−1; 13CO2: 2.2 %) > AMPA (CO2 tot: 0.53 μmol g−1; 13CO2: 0.3 %). Both the PLFAstot and 13C-PLFAs were highest in glycine (PLFAstot: 0.054–0.047 μmol g−1; 13C-PLFAs: 0.2–0.4 %) and glyphosate (PLFAstot: 0.049–0.047 μmol g−1; 13C-PLFAs: 0.1–0.3 %) treatments compared to sarcosine and AMPA treatments. Gram negative bacteria were major microbial group of soil microbiome as well as primary degraders of all compounds. In contrast, Gram-positive bacteria, actinobacteria and fungi could have been consumers of primary degraders. Certain genera e.g. Gemmatimonas, Arenimonas and Massilia showed increased abundance in certain treatments indicating their potential involvement in biodegradation. Based on similar time-dependent microbial activity and shifts in abundances of (13C-)PLFAs and 16S rRNA genera, we deduced that glyphosate was mainly degraded to glycine, and presumably at elevated amounts. We reported for the first time that the glycine presumably altered microbial activity and community composition rather than glyphosate directly. Future studies should thus also consider the potential impacts of degradation products of the parent compound on soil microbiomes.

Effect of electrokinetic process on in situ stabilization and detoxification of arsenic-contaminated soil with high content of calcium

Owing to the high risk of human exposure to arsenic-contaminated soil, reducing its toxicity is essential. This study used the electrokinetic (EK) process with iron-rich electrodes to synchronously achieve the accumulate, stabilize and detoxify soil arsenic. Changes in arsenic valence, leaching toxicity, and microbial communities related to toxicity were comprehensively considered. The results demonstrated that arsenic was mainly transported toward the anode and accumulated by electromigration owing to the negatively charged arsenic anions under EK conditions. The cathode approaching effectively promote arsenic movement to the anode; the largest As(T) transportation rate of 30.61% was achieved near the cathode (S4). The transportation ratio of As(III) was 1.84 times more than that of As(V). The As(III) content and leaching toxicity of soil arsenic in all treatments decreased after applying the EK process. In particular, the anode approaching effectively elevated the average ratios of soil As(III) oxidation and stabilization to 37.88% and 61.73%, respectively. Correspondingly, the total phospholipid fatty acid content increased substantially after EK treatment and showed a pollution stress elimination effect. The electrokinetic effect can essentially cause highly active and easily migrated arsenic to accumulate near the anode and middle sections. The electric field mediated iron mineralization and stabilized arsenic by oxidizing As(III) and reacting with newly formed iron-rich phases (S). Meanwhile, the electric field regulated the form of soil calcium from CaCO3 to CaSO4 and caused calcium-bound arsenic to change to a more stable form. According to these results, in situ stabilization and detoxification of arsenic-contaminated soil can be realized by the EK process, avoiding stabilizer addition and excavation.

Simulated phytoremediation by root exudates of Sudan grass of soil organochlorine pesticides: impact on the rhizosphere microbial community.

The present work aims to study the efficiency of root exudates of Sudan grass on the degradation of organochlorine pesticides (OCPs) and the consequent impact on the microbial and ecological characteristics of the soil, including population composition, quantity dynamics, and community structure. Pot experiments were carried out to study the effect of root exudates on the degradation of OCPs at initial concentrations ranging from 66.67 to 343.61mg/kg. In addition, the influence of root exudates on the rhizosphere microbial growth and their community structure was studied by monitoring the microbial biomass carbon, microbial biomass nitrogen, and phospholipid fatty acids (PLFAs) in the soils. In the range of OCP content (66.67 ~ 343.61mg/kg), the soil-microbial system mediated by root exudates significantly promoted the removal of OCP pollutants. The removal rate of OCPs in the rhizosphere soil (TR2) was as high as 79.32%, 36.86% higher than that in the OCP-contaminated group (TR1) and 60.63% higher than that in the sterilized treatment group (CK). Under the same treatment conditions (pollution level and additive dose), the enhanced removal rate of HCHs, toxaphene, HCB, aldrin, and γ-chlordane by root exudates was much higher than the total amount of OCPs, while the extent of enhanced dissipation of DDTs, mirex, endosulfanI, dieldrin, and heptachlor epoxide was always lower than that in the corresponding soils. During the experiment, the phospholipid fatty acid content of bacteria was dominant, followed by that of fungi, and their variation trend was consistent with the degradation characteristics of OCPs in soil. Root exudates of Sudan grass might change the rhizosphere bacterial and fungal community structure during the process of phytoremediation, leading to enhanced OCP degradation.

Labile carbon-induced soil organic matter turnover in a subtropical forest under different redox conditions

Labile organic carbon (LOC) input strongly affects soil organic matter (SOM) dynamics, including gains and losses. However, it is unclear how redox fluctuations regulate these processes of SOM decomposition and formation induced by LOC input. The objective of this study was to explore the impacts of LOC input on SOM turnover under different redox conditions. Soil samples were collected in a subtropical forest. A single pulse of 13C-labeled glucose (i.e., LOC) was applied to the soil. Soil samples were incubated for 40 days under three redox treatments, including aerobic, anoxic, and 10-day aerobic followed by 10-day anoxic conditions. Results showed that LOC input affected soil priming and 13C-SOM accumulation differently under distinct redox conditions by altering the activities of various microorganisms. 13C-PLFAs (phospholipid fatty acids) were analyzed to determine the role of microbial groups in SOM turnover. Increased activities of fungi and gram-positive bacteria (i.e., the K-strategists) by LOC input could ingest metabolites or residues of the r-strategists (e.g., gram-negative bacteria) to result in positive priming. Fungi could use gram-negative bacteria to stimulate priming intensity via microbial turnover in aerobic conditions first. Reduced activities of K-strategists as a result of the aerobic to anoxic transition decreased priming intensity. The difference in LOC retention in SOM under different redox conditions was mainly attributable to 13C-particulate organic carbon (13C-POC) accumulation. Under aerobic conditions, fungi and gram-positive bacteria used derivatives from gram-negative bacteria to reduce newly formed POC. However, anoxic conditions were not conducive to the uptake of gram-negative bacteria by fungi and gram-positive bacteria, favoring SOM retention. This work indicated that redox-regulated microbial activities can control SOM decomposition and formation induced by LOC input. It is extremely valuable for understanding the contribution of soil affected by redox fluctuations to the carbon cycle.

Phosphorus addition accelerates soil organic carbon mineralization by desorbing organic carbon and increasing microbial activity in subtropical forest soils

The magnitude and direction of soil organic carbon (SOC) mineralization are closely regulated by exogenous nutrient addition – and, especially, by limited nutrients such as phosphorus (P) – in tropical and subtropical ecosystems. However, the response of SOC decomposition to P addition and the underlying mechanisms operating in subtropical P-limited forest soils remain unclear. In this study, four subtropical forest soils (sandstone and granite soils planted with the chinkapin Castanopsis carlesii and Cunninghamia lanceolata (Chinese fir)) in Sanming City, Fujian Province, China were selected, and an incubation experiment with three levels (0, 0.1, 0.6 mg P g−1 soil) of P addition was conducted to explore the impact of P addition on SOC mineralization in subtropical forest soils. SOC mineralization, phospholipid fatty acids (PLFAs), enzymatic activities, and soil properties were determined. Results showed that P addition significantly increased the cumulative mineralization of SOC (P < 0.001). Additionally, the microbial biomass (e.g., fungal, bacterial, and total PLFAs) and the activities of C-cycling enzymes significantly increased (by 11.95 %–570.25 %) after P addition (P < 0.001), which suggests that exogenous P input enhanced microbial activity and thus accelerating SOC mineralization. P addition also significantly increased the concentration of dissolved organic C (DOC) (P < 0.001), thereby making soil C more available to microorganisms and allowing it to become quickly decomposed. A variance partitioning analysis (VPA) showed that DOC and fungal biomass acted as the predominant abiotic and biotic factors accelerating SOC mineralization under P addition. Using the results of a partial least squares path analysis (PLM-PM), we conclude that P addition stimulated the decomposition of SOC in these subtropical P-limited forest soils. Two processes help explain these results: (i) the enhancement of microbial activity in response to the alleviation of microbial P limitation and (ii) the fact that P addition desorbed the microbial inaccessible organic C and converting it into DOC, which is easily accessible to microbes, thereby contributing to SOC mineralization. Our study reveals how P input influences organic C mineralization in subtropical forest soils where P is limited. It also provides novel insight into the uncertainty of the global soil C sink, which might be partially attributable to exogenous nutrient inputs, especially in the case of limiting nutrients.

Nitrogen fertilizer builds soil organic carbon under straw return mainly via microbial necromass formation

Carbon (C) and nitrogen (N) inputs strongly influence the formation, turnover and sequestration of soil organic carbon (SOC) in agricultural ecosystems. It is not clear, however, how N input regulates the contribution of plant- and microbial-derived C to SOC sequestration under straw return. To fill this gap, plant and microbial biomarkers, as well as enzyme activities were determined in a long-term (18 years) field experiment. Straw return and N fertilization increased SOC content by 20% and 10%, respectively. Specifically, straw return increased the proportion of total lignin (mainly vanillyl and syringyl) phenols in SOC by 16%, but decreased the proportion of cinnamyl in SOC by 7.5%. This implied that some plant residues were selectively preserved, while the compounds that were less stable than cinnamyl were easily decomposed. The increased phospholipid fatty acid (PLFA) content and enzyme activities with straw return indicated the acceleration of straw decomposition. Based on amino sugar content, straw return did not alter the proportion of microbial necromass to SOC. Together, lignin and amino sugars co-determined the stable contribution of plant- and microbial-derived C to SOC sequestration under straw return. N fertilization increased the portion of microbial necromass (especially bacterial necromass) C in SOC by 6% and thus decreased the plant residue contribution to SOC. Accordingly, N fertilization accelerated the microbial utilization of straw and consequently microbial necromass formation. In terms of PLFA composition, Ascomycota and Basidiomycota, Actinobacteria, and Gram-negative bacteria were the key groups forming microbial necromass and thus SOC. N fertilization increased N-acquiring enzyme activities and boosted the involvement of microbial necromass in nutrient cycling, which in turn may stimulate plant and microbial growth. Overall, straw return simultaneously increased plant- and microbial-derived C, while N fertilization stimulated microbial growth and enzyme activity and thus increased straw conversion to microbial necromass.