Aims Validation of PMR as a phenotypic marker of CYP2C9 in the Jewish Israeli population. Methods Seventy-nine Jewish Israeli subjects collected urine over 24 hours following a single dose of 300 mg phenytoin (PHT). A single blood sample was drawn after 12 hours. PMR, a putative index of CYP2C9 activity, was derived from the ratio of urinary 5-(4-hydroxyphenyl)-5-phenylhydantoin (p-HPPH) to mid-interval plasma PHT concentration. CYP2C9 genotype was identified by PCR followed by incubation with restriction enzymes. Results The ethnic composition of the study population was reflective of the Jewish groups residing in Israel. PMR values exhibited 18-fold inter-individual variability with a typical Gaussian frequency distribution, which was skewed to the right. Forty-one subjects were homozygous for the wild-type allele (CYP2C9*1), 32 were carriers of one mutated allele (16 CYP2C9*2 and 16 CYP2C9*3), and 6 were carriers of 2 mutated alleles. PMR exhibits gene-dose effect so that among CYP2C9*1 homozygous, PMR was 16.17±9.76 ml/min (95% CI, 13.10 to 19.26) and significantly greater than in CYP2C9*2 heterozygous (8.54±4.33 ml/min, 95% CI, 6.24 to 10.85, p<0.05) and CYP2C9*3 heterozygous (7.33±3.55 ml/min, 95% CI, 5.44 to 9.22, p<0.001) or carriers of 2 variant alleles (6.73±4.22 ml/min, 95% CI, 2.30 to 11.15, p<0.01). Conclusions PMR exhibits marked inter-individual variability and it correlates with CYP2C9 genotype. Its use as a reliable marker of CYP2C9 activity in-vivo should be further evaluated. Clinical Pharmacology & Therapeutics (2005) 77, P60–P60; doi: 10.1016/j.clpt.2004.12.121