Using the Doppler frequency obtained from tracking a GNSS pilot signal to aid in tracking another signal modulated with higher rate navigation messages in a different frequency band can improve tacking robustness and lower the message demodulation threshold. Based on an analysis of received signal frequency coherence, a linearized mathematical model of the cross-frequency Doppler-assisted carrier phase tracking loop is built, a thermal noise jitter calculation equation for the assisted tracking loop is derived, and its dynamic stress response characteristics are examined. The loop design requirements for eliminating the influence of inter-frequency frequency bias are clarified, as are the cross-frequency assist signal selection criteria. Monte Carlo simulations and preliminary field tests validate the theoretical results using the B1C pilot signal-aided tracking B2b signal of the MEO satellite in the BeiDou satellite navigation system (BDS). Experimental results show that the carrier phase tracking threshold of the B2b signal can be reduced by about 4 dB.