Phase Space Geometry Research Articles

Travelling pulses on three spatial scales in a Klausmeier-type vegetation-autotoxicity model

Reaction-diffusion models describing interactions between vegetation and water reveal the emergence of several types of patterns and travelling wave solutions corresponding to structures observed in real-life. Increasing their accuracy by also considering the ecological factor known as autotoxicity has lead to more involved models supporting the existence of complex dynamic patterns. In this work, we include an additional carrying capacity for the biomass in a Klausmeier-type vegetation-water-autotoxicity model, which induces the presence of two asymptotically small parameters: ɛ, representing the usual scale separation in vegetation-water models, and δ, directly linked to autotoxicity. We construct three separate types of homoclinic travelling pulse solutions based on two different scaling regimes involving ɛ and δ, with and without a so-called superslow plateau. The relative ordering of the small parameters significantly influences the phase space geometry underlying the construction of the pulse solutions. We complement the analysis by numerical continuation of the constructed pulse solutions, and demonstrate their existence (and stability) by direct numerical simulation of the full partial differential equation model.

Phase space geometry of general quantum energy transitions

The mixed density operator for coarsegrained eigenlevels of a static Hamiltonian is represented in phase space by the spectral Wigner function, which has its peak on the corresponding classical energy shell. The action of trajectory segments along the shell determine the phase of the Wigner oscillations in its interior. The classical transitions between any pair of energy shells, driven by a general external time dependent Hamiltonian, also have a smooth probability density. It is shown here that a further contribution to the transition between the corresponding pair of coarsegrained energy levels, which oscillates with either energy, or the driving time, is determined by four trajectory segments (two in the pair of energy shells and two generated by the driving Hamiltonian) that join exactly to form a closed compound orbit (CCO). In its turn, this sequence of segments belongs to the semiclassical expression of a compound unitary operator that combines four quantum evolutions: a pair generated by the static internal Hamiltonian and a pair generated by the driving Hamiltonian. The CCOs are shown to belong to continuous families, which are initially seeded at points where the classical flow generated by both Hamiltonians commute.

Schrödinger dynamics in length-scale hierarchy: from spatial rescaling to Huygens-like proliferation of Gaussian wavepackets

Studying possible laws, rules, and mechanisms of time-evolution of quantum wavefunctions leads to deeper understanding about the essential nature of the Schrödinger dynamics and interpretation on what the quantum wavefunctions are. As such, we attempt to clarify the mechanical and geometrical processes of deformation and bifurcation of a Gaussian wavepacket of the Maslov type from the viewpoint of length-scale hierarchy in the wavepacket size relative to the range of relevant potential functions. Following the well-known semiclassical view that (1) Newtonian mechanics gives a phase space geometry, which is to be projected onto configuration space to determine the basic amplitude of a wavefunction (the primitive semiclassical mechanics), our study proceeds as follows. (2) The quantum diffusion arising from the quantum kinematics makes the Gaussian exponent complex-valued, which consequently broadens the Gaussian amplitude and brings about a specific quantum phase. (3) The wavepacket is naturally led to bifurcation (branching), when the packet size gets comparable with or larger than the potential range. (4) Coupling between the bifurcation and quantum diffusion induces the Huygens-principle like wave dynamics. (5) All these four processes are collectively put into a path integral form. We discuss some theoretical consequences from the above analyses, such as (i) a contrast between the δ-function-like divergence of a wavefunctions at focal points and the mesoscopic finite-speed shrink of a Gaussian packet without instantaneous collapse, (ii) the mechanism of release of the zero-point energy to external dynamics and that of tunneling, (iii) relation between the resultant stochastic quantum paths and wave dynamics, and so on.

Phase-Space Geometry and Optimal State Preparation in Quantum Metrology with Collective Spins

We revisit well-known protocols in quantum metrology using collective spins and propose a unifying picture for optimal state preparation based on a semiclassical description in phase space. We show how this framework allows for quantitative predictions of the timescales required to prepare various metrologically useful states, and that these predictions remain accurate even for moderate system sizes, surprisingly far from the classical limit. Furthermore, this framework allows us to build a geometric picture that relates optimal (exponentially fast) entangled probe preparation to the existence of separatrices connecting saddle points in phase space. We illustrate our results with the paradigmatic examples of the two-axis countertwisting and twisting-and-turning Hamiltonians, where we provide analytical expressions for all the relevant optimal timescales. Finally, we propose a generalization of these models to include p-body collective interaction (or p-order twisting), beyond the usual case of p=2. Using our geometric framework, we prove a no-go theorem for the local optimality of these models for p>2.Received 8 November 2022Revised 1 February 2023Accepted 28 March 2023DOI:https://doi.org/10.1103/PRXQuantum.4.020314Published by the American Physical Society under the terms of the Creative Commons Attribution 4.0 International license. Further distribution of this work must maintain attribution to the author(s) and the published article's title, journal citation, and DOI.Published by the American Physical SocietyPhysics Subject Headings (PhySH)Research AreasQuantum metrologyQuantum sensingTechniquesPhase space dynamicsQuantum InformationNonlinear DynamicsAtomic, Molecular & Optical

Tethered hard spheres: A bridge between the fluid and solid phases.

The thermodynamics of hard spheres tethered to a Face-Centered Cubic (FCC) lattice is investigated using event-driven molecular-dynamics. The particle-particle and the particle-tether collision rates are related to the phase space geometry and are used to study the FCC and fluid states. In tethered systems, the entropy can be determined by at least two routes: (i) through integration of the tether collision rates with the tether length rT or (ii) through integration of the particle-particle collision rates with the hard-sphere diameter σ (or, equivalently, the density). If the entropy were an entirely analytic function of rT and σ, these two methods for calculating the entropy should lead to the same results; however, a non-analytic region exists as an extension of the solid-fluid phase transition of the untethered hard-sphere system, and integration paths that cross this region will lead to values for the entropy that depend on the particular path chosen. The difference between the calculated entropies appears to be related to the communal entropy, and the location of the non-analytic region appears to be related to conditions where the regions of phase space associated with the FCC configuration become separated from those associated with the disordered fluid. The non-analytic region is finite in extent, vanishing below rT/a ≈ 0.55, where a is the lattice spacing, and there are many continuous paths that connect the fluid and solid phases that can be used to determine the crystal free energy with respect to the fluid.

Estimation of Parameters for an Archetypal Model of Cardiomyocyte Membrane Potentials

Contemporary realistic mathematical models of single-cell cardiac electrical excitation are immensely detailed. Model complexity leads to parameter uncertainty, high computational cost and barriers to mechanistic understanding. There is a need for reduced models that are conceptually and mathematically simple but physiologically accurate. To this end, we consider an archetypal model of single-cell cardiac excitation that replicates the phase-space geometry of detailed cardiac models, but at the same time has a simple piecewise-linear form and a relatively low-dimensional configuration space. In order to make this archetypal model practically applicable, we develop and report a robust method for estimation of its parameter values from the morphology of single-stimulus action potentials derived from detailed ionic current models and from experimental myocyte measurements. The procedure is applied to five significant test cases and an excellent agreement with target biomarkers is achieved. Action potential duration restitution curves are also computed and compared to those of the target test models and data, demonstrating conservation of dynamical pacing behaviour by the fine-tuned archetypal model. An archetypal model that accurately reproduces a variety of wet-lab and synthetic electrophysiology data offers a number of specific advantages such as computational efficiency, as also demonstrated in the study. Open-source numerical code of the models and methods used is provided.

Quantization of the zigzag model

The zigzag model is a relativistic integrable N-body system describing the leading high-energy semiclassical dynamics on the worldsheet of long confining strings in massive adjoint two-dimensional QCD. We discuss quantization of this model. We demonstrate that to achieve a consistent quantization of the model it is necessary to account for the non-trivial geometry of phase space. The resulting Poincaré invariant integrable quantum theory is a close cousin of Toverline{T} deformed models.

Geometry of transit orbits in the periodically-perturbed restricted three-body problem

In the circular restricted three-body problem, low energy transit orbits are revealed by linearizing the governing differential equations about the collinear Lagrange points. This procedure fails when time-periodic perturbations are considered, such as perturbation due to the sun (i.e., the bicircular problem) or orbital eccentricity of the primaries. For the case of a time-periodic perturbation, the Lagrange point is replaced by a periodic orbit, equivalently viewed as a hyperbolic-elliptic fixed point of a symplectic map (the stroboscopic Poincaré map). Transit and non-transit orbits can be identified in the discrete map about the fixed point, in analogy with the geometric construction of Conley and McGehee about the index-1 saddle equilibrium point in the continuous dynamical system. Furthermore, though the continuous time system does not conserve the Hamiltonian energy (which is time-varying), the linearized map locally conserves a time-independent effective Hamiltonian function. We demonstrate that the phase space geometry of transit and non-transit orbits is preserved in going from the unperturbed to a periodically-perturbed situation, which carries over to the full nonlinear equations.

Slow manifold reduction as a systematic tool for revealing the geometry of phase space

Many non-dissipative reduced plasma models can be derived from more fundamental non-dissipative models by restricting to an approximate invariant manifold. I present a general systematic procedure for finding the Hamiltonian formulation of a plasma model that can be derived in this manner. Several illustrative examples are considered in detail.

Phase space geometry of isolated to condensed chemical reactions.

The complexity of gas and condensed phase chemical reactions has generally been uncovered either approximately through transition state theories or exactly through (analytic or computational) integration of trajectories. These approaches can be improved by recognizing that the dynamics and associated geometric structures exist in phase space, ensuring that the propagator is symplectic as in velocity-Verlet integrators and by extending the space of dividing surfaces to optimize the rate variationally, respectively. The dividing surface can be analytically or variationally optimized in phase space, not just over configuration space, to obtain more accurate rates. Thus, a phase space perspective is of primary importance in creating a deeper understanding of the geometric structure of chemical reactions. A key contribution from dynamical systems theory is the generalization of the transition state (TS) in terms of the normally hyperbolic invariant manifold (NHIM) whose geometric phase-space structure persists under perturbation. The NHIM can be regarded as an anchor of a dividing surface in phase space and it gives rise to an exact non-recrossing TS theory rate in reactions that are dominated by a single bottleneck. Here, we review recent advances of phase space geometrical structures of particular relevance to chemical reactions in the condensed phase. We also provide conjectures on the promise of these techniques toward the designand control of chemical reactions.

Special Relativity and Its Newtonian Limit from a Group Theoretical Perspective

In this pedagogical article, we explore a powerful language for describing the notion of spacetime and particle dynamics intrinsic to a given fundamental physical theory, focusing on special relativity and its Newtonian limit. The starting point of the formulation is the representations of the relativity symmetries. Moreover, that seriously furnishes—via the notion of symmetry contractions—a natural way in which one can understand how the Newtonian theory arises as an approximation to Einstein’s theory. We begin with the Poincaré symmetry underlying special relativity and the nature of Minkowski spacetime as a coset representation space of the algebra and the group. Then, we proceed to the parallel for the phase space of a spin zero particle, in relation to which we present the full scheme for its dynamics under the Hamiltonian formulation, illustrating that as essentially the symmetry feature of the phase space geometry. Lastly, the reduction of all that to the Newtonian theory as an approximation with its space-time, phase space, and dynamics under the appropriate relativity symmetry contraction is presented. While all notions involved are well established, the systematic presentation of that story as one coherent picture fills a gap in the literature on the subject matter.

Transition criteria and phase space structures in a three degree of freedom system with dissipation

Escape from a potential well through an index-1 saddle can be widely found in some important physical systems. Knowing the criteria and phase space geometry that govern escape events plays an important role in making use of such phenomenon, particularly when realistic frictional or dissipative forces are present. We aim to extend the study of the escape dynamics around the saddle from two degrees of freedom to three degrees of freedom, presenting both a methodology and phase space structures. Both the ideal conservative system and a perturbed, dissipative system are considered. We define the five-dimensional transition region, , as the set of initial conditions of a given initial energy h for which the trajectories will escape from one side of the saddle to another. Invariant manifold arguments demonstrate that in the six-dimensional phase space, the boundary of the transition region, , is topologically a four-dimensional hyper-cylinder in the conservative system, and a four-dimensional hyper-sphere in the dissipative system. The transition region in the dissipative (conservative) system can be constructed by a solid three-dimensional ellipsoid (solid three-dimensional cylinder) in the three-dimensional configuration space, where at each point, there is a cone of velocity—the velocity directions leading to transition are given by cones, with velocity magnitude given by the initial energy and the direction by two spherical angles with given limits. To illustrate our analysis, we consider an example system which has two potential minima connected by an index 1 saddle.

Nonassociative Geometry of Nonholonomic Phase Spaces with Star R‐flux String Deformations and (non) Symmetric Metrics

AbstractWe elaborate on nonassociative differential geometry of phase spaces endowed with nonholonomic (non‐integrable) distributions and frames, nonlinear and linear connections, symmetric and nonsymmetric metrics, and correspondingly adapted quasi‐Hopf algebra structures. The approach is based on the concept of nonassociative star product introduced for describing closed strings moving in a constant R‐flux background. Generalized Moyal‐Weyl deformations are considered when, for nonassociative and noncommutative terms of star deformations, there are used nonholonomic frames (bases) instead of local partial derivatives. In such modified nonassociative and nonholonomic spacetimes and associated complex/real phase spaces, the coefficients of geometric and physical objects depend both on base spacetime coordinates and conventional (co) fiber velocity/momentum variables like in (non) commutative Finsler‐Lagrange‐Hamilton geometry. For nonassociative and (non) commutative phase spaces modelled as total spaces of (co) tangent bundles on Lorentz manifolds enabled with star products and nonholonomic frames, we consider associated nonlinear connection, N‐connection, structures determining conventional horizontal and (co) vertical (for instance, 4+4) splitting of dimensions and N‐adapted decompositions of fundamental geometric objects. There are defined and computed in abstract geometric and N‐adapted coefficient forms the torsion, curvature and Ricci tensors. We extend certain methods of nonholonomic geometry in order to construct R‐flux deformations of vacuum Einstein equations for the case of N‐adapted linear connections and symmetric and nonsymmetric metric structures.

On the Geometry of Slow-Fast Phase Spaces and the Semiclassical Quantization

In the context of the averaging method for Poisson and symplectic structures and the theory of Hannay–Berry connections, we discuss some aspects of the semiclassical quantization for a class of slow-fast Hamiltonian systems with two degrees of freedom. For a pseudodifferential Weyl operator with two small parameters corresponding to the semiclassical and adiabatic limits, we show how to construct some series of quasimodes associated to a family of Lagrangian 2-tori which are almost invariant with respect to the classical dynamics.

Отражение развития инженерной геометрии в журнале «Геометрия и графика»

In the paper "On the Increasing Role of Geometry", published in the electronic "Journal of Natural Science Research" in 2017, it was outspoken a hypothesis that now, at the time of innovative technologies, the importance of geometry is constantly increasing. The significance of geometry is also demonstrated by numerous Ph.D. and doctoral dissertations in the specialty No 05.01.01 - “Engineering Geometry and Computer Graphics”. It can be affirmed that all and everyone dissertations of technical and technological profile contain a geometric component to one degree or another. The "Geometry and Graphics" journal turned 8 (it was founded in June 2012). During this time, on its pages have been published numerous scientific papers, developing namely geometry and its branches: from simplest geometric constructions based on new properties of both lines and surfaces, to imaginary elements. Investigations were conducted in the following areas: “New Directions in Geometry”, “Fractal Geometry”, “Multidimensional Geometry”, “Geometric Constructions”, “Construction and Research of Surfaces”, “Imaginary Geometry”, “Practical Application of Geometry”, “Computer Graphics”, “Descriptive Geometry as Basis of other Branches of Geometry” ,”Geometry of Phase Spaces”. The journal publishes both recognized scientists and candidate for Ph.D. and doctor degrees. The considered array of papers clearly confirms the statement of the majority of authors, published in the journal, about geometry continuous development, which knocks out the ground for skeptics who decided that geometry is the science of the past centuries. As long as objects with shapes and surfaces surround us, geometry will be in demand. This, as they say, is unequivocal.

Trapping of swimmers in a vortex lattice.

We examine the motion of rigid, ellipsoidal swimmers subjected to a steady vortex flow in two dimensions. Numerical simulations of swimmers in a spatially periodic array of vortices reveal a range of possible behaviors, including trapping inside a single vortex and motility-induced diffusion across many vortices. While the trapping probability vanishes at a sufficiently high swimming speed, we find that it exhibits surprisingly large oscillations as this critical swimming speed is approached. Strikingly, at even higher swimming speeds, we find swimmers that swim perpendicular to their elongation direction can again become trapped. To explain this complex behavior, we investigate the underlying swimmer phase-space geometry. We identify the fixed points and periodic orbits of the swimmer equations of motion that regulate swimmer trapping inside a single vortex cell. For low to intermediate swimming speeds, we find that a stable periodic orbit surrounded by invariant tori forms a transport barrier to swimmers and can trap them inside individual vortices. For swimming speeds approaching the maximum fluid speed, we find instead that perpendicular swimmers can be trapped by asymptotically stable fixed points. A bifurcation analysis of the stable periodic orbit and the fixed points explains the complex and non-monotonic breakdown and re-emergence of swimmer trapping as the swimmer speed and shape are varied.

Tilting and Squeezing: Phase Space Geometry of Hamiltonian Saddle-Node Bifurcation and its Influence on Chemical Reaction Dynamics

In this article, we present the influence of a Hamiltonian saddle-node bifurcation on the high-dimensional phase space structures that mediate reaction dynamics. To achieve this goal, we identify the phase space invariant manifolds using Lagrangian descriptors, which is a trajectory-based diagnostic suitable for the construction of a complete “phase space tomography” by means of analyzing dynamics on low-dimensional slices. First, we build a Hamiltonian system with one degree-of-freedom (DoF) that models reaction, and study the effect of adding a parameter to the potential energy function that controls the depth of the well. Then, we extend this framework to a saddle-node bifurcation for a two DoF Hamiltonian, constructed by coupling a harmonic oscillator, i.e. a bath mode, to the other reactive DoF in the system. For this problem, we describe the phase space structures associated with the rank-1 saddle equilibrium point in the bottleneck region, which is a Normally Hyperbolic Invariant Manifold (NHIM) and its stable and unstable manifolds. Finally, we address the qualitative changes in the reaction dynamics of the Hamiltonian system due to changes in the well depth of the potential energy surface that gives rise to the saddle-node bifurcation.

Elastic avalanches reveal marginal behavior in amorphous solids

Mechanical deformation of amorphous solids can be described as consisting of an elastic part in which the stress increases linearly with strain, up to a yield point at which the solid either fractures or starts deforming plastically. It is well established, however, that the apparent linearity of stress with strain is actually a proxy for a much more complex behavior, with a microscopic plasticity that is reflected in diverging nonlinear elastic coefficients. Very generally, the complex structure of the energy landscape is expected to induce a singular response to small perturbations. In the athermal quasistatic regime, this response manifests itself in the form of a scale-free plastic activity. The distribution of the corresponding avalanches should reflect, according to theoretical mean-field calculations [S. Franz and S. Spigler, Phys. Rev. E 95, 022139 (2017)], the geometry of phase space in the vicinity of a typical local minimum. In this work, we characterize this distribution for simple models of glass-forming systems, and we find that its scaling is compatible with the mean-field predictions for systems above the jamming transition. These systems exhibit marginal stability, and scaling relations that hold in the stationary state are examined and confirmed in the elastic regime. By studying the respective influence of system size and age, we suggest that marginal stability is systematic in the thermodynamic limit.

The potential of photoplethysmogram and galvanic skin response in emotion recognition using nonlinear features.

Recently, developing an accurate automatic emotion recognition system using a minimum number of bio-signals has become a challenging issue in "affective computing." This study aimed to propose a reliable system by examining nonlinear dynamics of photoplethysmogram (PPG) and galvanic skin response (GSR). To address this goal, two strategies were adopted. First, the efficiency of each signal in valence/arousal based emotion categorization was examined. Then, the proficiency of a hybrid feature, by combining both GSR and PPG features was studied. Lyapunov exponents, lagged Poincare's measures, and approximate entropy were extracted to characterize the irregularity and chaotic behavior of the phase space. To discriminate two levels of arousal and two levels of the valence, a probabilistic neural network (PNN) with different sigma adjustment parameter was examined. The results showed that the phase space geometry and consequently, the signal dynamics are influenced by the emotional music video. Additionally, distinctive patterns of the phase space behavior were observed under the influence of different lags. For both signals, the most irregularity was observed during the high valence, and the least irregularity was seen during the low valence. Consequently, signals' irregularity is affected by the valence dimension. The results showed that the fusion has more potential for emotion recognition than that of using each signal separately. For sigma = 0.1, the highest recognition rate was 100% in a subject-dependent mode. In a subject-independent mode, the maximum accuracies of 88.57 and 86.8% were obtained for arousal and valence dimensions, respectively.

The Hamilton-Jacobi analysis and canonical covariant description for three-dimensional Palatini theory plus a Chern-Simons term

By using the Hamilton-Jacobi (HJ) framework the three-dimensional Palatini theory plus a Chern-Simons term (PCS) is analyzed. We report the complete set of HJ Hamiltonians and a generalized HJ differential from which all symmetries of the theory are identified. Moreover, we show that despite PCS Lagrangian produces Einstein’s equations, the generalized HJ brackets depend on a Barbero-Immirzi-like parameter. In addition we complete our study by performing a canonical covariant analysis, and we construct a closed and gauge invariant two-form that encodes the symplectic geometry of the covariant phase space.