Phase Contrast Effects Research Articles

Condenser-free contrast methods for transmitted-light microscopy.

Phase contrast microscopy allows the study of highly transparent yet detail-rich specimens by producing intensity contrast from phase objects within the sample. Presented here is a generalized phase contrast illumination schema in which condenser optics are entirely abrogated, yielding a condenser-free yet highly effective method of obtaining phase contrast in transmitted-light microscopy. A ring of light emitting diodes (LEDs) is positioned within the light-path such that observation of the objective back focal plane places the illuminating ring in appropriate conjunction with the phase ring. It is demonstrated that true Zernike phase contrast is obtained, whose geometry can be flexibly manipulated to provide an arbitrary working distance between illuminator and sample. Condenser-free phase contrast is demonstrated across a range of magnifications (4–100×), numerical apertures (0.13–1.65NA) and conventional phase positions. Also demonstrated is condenser-free darkfield microscopy as well as combinatorial contrast including Rheinberg illumination and simultaneous, colour-contrasted, brightfield, darkfield and Zernike phase contrast. By providing enhanced and arbitrary working space above the preparation, a range of concurrent imaging and electrophysiological techniques will be technically facilitated. Condenser-free phase contrast is demonstrated in conjunction with scanning ion conductance microscopy (SICM), using a notched ring to admit the scanned probe. The compact, versatile LED illumination schema will further lend itself to novel next-generation transmitted-light microscopy designs. The condenser-free illumination method, using rings of independent or radially-scanned emitters, may be exploited in future in other electromagnetic wavebands, including X-rays or the infrared.

Phase-contrast and magnification radiography at diagnostic X-ray energies using a pseudo-microfocus X-ray source.

To investigate the use of conventional diagnostic X-ray tubes for applications in which specialist microfocus sources are normally required. A conventional diagnostic X-ray tube was used in conjunction with a range of apertures to investigate improvements in spatial resolution using a line-pairs test object. Phase-contrast effects were investigated by varying source-to-object and object-to-receptor distances using a 2-French catheter as a clinically realistic test object. For magnification radiography using a computed radiography receptor and conventional X-ray tube with a 1-mm nominal focus size, the limiting spatial resolution was improved from 3.55 line-pairs per millimetre, for a conventional contact image, to 5.6 line-pairs per millimetre, for a ×2 magnified view with a 250-µm aperture. For inline phase-contrast radiography, phase contrast enhancement of a 2-French catheter was demonstrated, and the expected trends with variations in source-to-object and object-to-receptor distances were found. Images of a neonatal phantom demonstrated a subtle improvement in visibility of a superimposed 1-French catheter simulating a percutaneously inserted central catheter for no increase in patient radiation dose. Spatial resolution improvement and visible phase contrast can be produced in clinically relevant objects using a pseudo-microfocus geometry at X-ray energies in the normal diagnostic range, using conventional diagnostic X-ray tubes and image receptors. The disadvantages of the proposal are the large distances required to produce phase contrast and limitations imposed by the resulting tube loading. It is possible to use conventional diagnostic X-ray equipment in applications that normally require microfocus X-ray sources. This presents some possibilities for clinical applications.

Clinical study in phase- contrast mammography: image-quality analysis

The first clinical study of phase-contrast mammography (PCM) with synchrotron radiation was carried out at the Synchrotron Radiation for Medical Physics beamline of the Elettra synchrotron radiation facility in Trieste (Italy) in 2006-2009. The study involved 71 patients with unresolved breast abnormalities after conventional digital mammography and ultrasonography exams carried out at the Radiology Department of Trieste University Hospital. These cases were referred for mammography at the synchrotron radiation facility, with images acquired using a propagation-based phase-contrast imaging technique. To investigate the contribution of phase-contrast effects to the image quality, two experienced radiologists specialized in mammography assessed the visibility of breast abnormalities and of breast glandular structures. The images acquired at the hospital and at the synchrotron radiation facility were compared and graded according to a relative seven-grade visual scoring system. The statistical analysis highlighted that PCM with synchrotron radiation depicts normal structures and abnormal findings with higher image quality with respect to conventional digital mammography.

Influence of phase contrast and detector resolution on the segmentation of tomographic images containing voids

An experimental and numerical tomographic study on the influence of lateral beam coherence and limited detector resolution on the size of voids in copper is presented. Several scans of the same sample were performed at ID15A of ESRF under pink beam conditions and different sample-detector distances. The tomographic images were segmented using a gradient based method and then the same voids appearing in subsequent volumes were identified through image-correlation. It was found that the segmented void size is smaller at short detector distances, but it saturates at values of about 160–200 mm. Simulations show that the phase contrast available at larger distances enhances the intensity gradient at void-matrix interfaces leading to a proper segmentation if gradient based algorithms are used. For distances involved in the present experiment the true size of voids with diameters in the 4.7–12 μm range is not altered by phase contrast effects. The smaller apparent void size (by about 15–20%) obtained at short distances (20–50 mm) is a result of low signal to noise ratio of the corresponding reconstructions.

Effects of Tube Voltage on Phase-Contrast Imaging for Different Microfocus X-Ray Tubes

In the past decade, phase-contrast imaging (PCI) has become a hot research with an increased improvement of the image contrast with respect to conventional absorption radiography. In this paper, effects of tube voltage (kVp) on propagation-based phase-contrast imaging have been investigated with two types of microfocus x-ray tubes, a conventional sealed x-ray tube with the focal spot size of 13 - 20 μm and an open x-ray tube with minimum focal spot size less than 2 μm. A cooled x-ray CCD detector with the pixel size of 24 μm was used to acquire digital images. Two thin plastic sheets with different thickness were used as radiography phantoms. Two different phenomena were observed for the two x-ray tubes. For the open tube, phase-contrast effect has a slight drop with the increasing of tube voltage, however, it is opposite for the sealed tube. A further investigation indicates that the variation of focal spot size causes the abnormal result for the sealed tube. It also shows that phase-contrast effect is more sensitive to focal spot size than tube voltage.

Analysis and interpretation of the first monochromatic X-ray tomography data collected at the Australian Synchrotron Imaging and Medical beamline

The first monochromatic X-ray tomography experiments conducted at the Imaging and Medical beamline of the Australian Synchrotron are reported. The sample was a phantom comprising nylon line, Al wire and finer Cu wire twisted together. Data sets were collected at four different X-ray energies. In order to quantitatively account for the experimental values obtained for the Hounsfield (or CT) number, it was necessary to consider various issues including the point-spread function for the X-ray imaging system and harmonic contamination of the X-ray beam. The analysis and interpretation of the data includes detailed considerations of the resolution and efficiency of the CCD detector, calculations of the X-ray spectrum prior to monochromatization, allowance for the response of the double-crystal Si monochromator used (via X-ray dynamical theory), as well as a thorough assessment of the role of X-ray phase-contrast effects. Computer simulations relating to the tomography experiments also provide valuable insights into these important issues. It was found that a significant discrepancy between theory and experiment for the Cu wire could be largely resolved in terms of the effect of the point-spread function. The findings of this study are important in respect of any attempts to extract quantitative information from X-ray tomography data, across a wide range of disciplines, including materials and life sciences.

Non-destructive characterisation of polymers and Al-alloys by polychromatic cone-beam phase contrast tomography

X-ray computed tomography (XCT) has become a very important tool for the non-destructive characterisation of materials. Continuous improvements in the quality and performance of X-ray tubes and detectors have led to cone-beam XCT systems that can now achieve spatial resolutions down to 1 {mu}m and even below. Since not only the amplitude but also the phase of an X-ray beam is altered while passing through an object, phase contrast effects can occur even for polychromatic sources when the spatial coherence due to a small focal spot size is high enough. This can lead to significant improvements over conventional attenuation-based X-ray computed tomography. Phase contrast can increase by edge enhancement the visibility of small structures and of features which are only slightly different in attenuation. We report on the possibilities of polychromatic cone-beam phase contrast tomography for non-destructive characterisation of materials. A carbon fibre-reinforced polymer and the Al-alloys AlMg5Si7 and AlSi18 were investigated with high resolution cone-beam X-ray computed tomography with a polychromatic tube source. Under certain conditions strong phase contrast resulting in an upward and downward overshooting of the grey values across edges was observed. The phase effects are much stronger for the polymer than for the Al-alloys. The influencemore » on the phase contrast of the parameters, including source-detector distance, focal spot size and tube acceleration voltage is presented. Maximum phase contrast was observed for a maximum distance between the source and the detector, for a low voltage and a minimum focal spot size at the X-ray source. The detectability of the different phases is improved by the edge enhancement and the resulting improvement of sharpness. Thus, a better segmentation of the carbon fibres in the fibre-reinforced polymer and of the Mg{sub 2}Si-phase in the AlMg5Si7-alloy is achieved. Primary and eutectic Si cannot be detected by attenuation-based X-ray computed tomography due to the small difference in X-ray attenuation between the Si and the Al-matrix in AlSi18. However, phase contrast effects lead to a significant detectability and the large primary Si particles become clearly visible in the tomograms of AlSi18. - Highlights: Black-Right-Pointing-Pointer Phase contrast increases with increasing distance object-detector and with decreasing U, X-ray spot. Black-Right-Pointing-Pointer The detectability of details is improved by the phase contrast. Black-Right-Pointing-Pointer For the carbon fibre-reinforced polymer the visibility of the carbon fibres is improved. Black-Right-Pointing-Pointer For AlMg5Si7 the detectability of the phases Fe-aluminides and Mg{sub 2}Si particles is improved. Black-Right-Pointing-Pointer For AlSi18 primary Si particles with a size > 50 {mu}m become detectable because of the phase contrast.« less

Investigation of the effect of tube voltage and imaging geometry on phase contrast imaging for a micro-CT system

Based upon a bench-top micro-CT system, propagation-based phase-contrast imaging has been investigated using insects and a thin plastic sheet. The system mainly includes a micro-focus source with focal spot size of 13–20 μm and a cooled X-ray CCD detector with pixel size of 24 μm. The edge-enhancement effect can be found clearly in the acquired images. With a 0.5 mm thickness plastic edge phantom, the effects of X-ray tube voltage and imaging geometry on the phase-contrast imaging were investigated, and quantitative index, edge-enhancement index (EEI), were also calculated. In our study, an interesting phenomenon was observed that the phase-contrast effect becomes more pronounced as the tube voltage increases from 20 kVp to 90 kVp. Further investigation indicates that smaller focal spot size resulting from the reduction of tube current at higher tube voltage, has caused the unexpected phenomenon. Inferred from our results, phase-contrast effect is insensitive to the tube voltage in the range of 20–90 kVp (widely used in medical diagnosis); however, it is sensitive to the focal spot size. In addition, for the investigation of the effect of imaging geometry, an optimal geometric magnification range of 2.5–4.5 is suggested to get a good phase-contrast imaging for a micro-CT system with source-to-detector distance of 720 mm.

Segmentation of Synchrotron Radiation micro-Computed Tomography Images using Energy Minimization via Graph Cuts

The research on applications of segmentation algorithms to Synchrotron Radiation X-Ray micro-Computed Tomography (SR-μCT) is an open problem, due to the interesting and well-known characteristics of SR images, such as the phase contrast effect. The Energy Minimization via Graph Cuts (EMvGC) algorithm represents state-of-art segmentation algorithm, presenting an enormous potential of application in SR-μCT imaging. We describe the application of the algorithm EMvGC with swap move for the segmentation of bone images acquired at the ELETTRA Laboratory (Trieste, Italy).

Characterization of an x‐ray phase contrast imaging system based on the miniature synchrotron MIRRORCLE‐6X

The implementation of in-line x-ray phase contrast imaging (PCI) for soft-tissue patient imaging is hampered by the lack of a bright and spatially coherent x-ray source that fits into the hospital environment. This article provides a quantitative characterization of the phase-contrast enhancement of a PCI system based on the miniature synchrotron technology MIRRORCLE-6X. The phase-contrast effect was measured using an edge response of a plexiglass plate as a function of the incident angle of radiation. We have developed a comprehensive x-ray propagation model based on the system's components, properties, and geometry in order to interpret the measurement data. Monte-Carlo simulations are used to estimate the system's spectral properties and resolution. The measured ratio of the detected phase-contrast to the absorption contrast is currently in the range 100% to 200%. Experiments show that with the current implementation of the MIRRORCLE-6X, a target smaller than 30-40 μm does not lead to a larger phase-contrast. The reason for this is that the fraction of x-rays produced by the material (carbon filament and glue) that is used for mounting the target in the electron beam is more than 25% of the total amount of x-rays produced. This increases the apparent source size. The measured phase-contrast is at maximum two times larger than the absorption contrast with the current set-up. Calculations based on our model of the present imaging system predict that the phase-contrast can be up to an order of magnitude larger than the absorption contrast in case the materials used for mounting the target in the electron beam do not (or hardly) produce x-rays. The methods described in this paper provide vital feedback for guiding future modifications to the design of the x-ray target of MIRRORCLE-type system and configuration of the in-line PCI systems in general.

Automated segmentation of synchrotron radiation micro-computed tomography biomedical images using Graph Cuts and neural networks

Synchrotron Radiation (SR) X-ray micro-Computed Tomography (μCT) enables magnified images to be used as a non-invasive and non-destructive technique with a high space resolution for the qualitative and quantitative analyses of biomedical samples. The research on applications of segmentation algorithms to SR-μCT is an open problem, due to the interesting and well-known characteristics of SR images for visualization, such as the high resolution and the phase contrast effect. In this article, we describe and assess the application of the Energy Minimization via Graph Cuts (EMvGC) algorithm for the segmentation of SR-μCT biomedical images acquired at the Synchrotron Radiation for MEdical Physics (SYRMEP) beam line at the Elettra Laboratory (Trieste, Italy). We also propose a method using EMvGC with Artificial Neural Networks (EMANNs) for correcting misclassifications due to intensity variation of phase contrast, which are important effects and sometimes indispensable in certain biomedical applications, although they impair the segmentation provided by conventional techniques. Results demonstrate considerable success in the segmentation of SR-μCT biomedical images, with average Dice Similarity Coefficient 99.88% for bony tissue in Wistar Rats rib samples (EMvGC), as well as 98.95% and 98.02% for scans of Rhodnius prolixus insect samples (Chagas's disease vector) with EMANNs, in relation to manual segmentation. The techniques EMvGC and EMANNs cope with the task of performing segmentation in images with the intensity variation due to phase contrast effects, presenting a superior performance in comparison to conventional segmentation techniques based on thresholding and linear/nonlinear image filtering, which is also discussed in the present article.

Aluminum and tungsten X-pinch experiments on 100 kA, 100 ns linear transformer driver stage

X-pinch experiments have been carried out on a 100 kA, 100 ns linear transformer driver stage recently built up. The X-pinches exhibited a source size of about 10 μm, a pulse duration of 3 ns, 3–5 keV radiation energy of 3.9 mJ, and a burst time jitter of tens of nanosecond with the 2-wire 8 μm W X-pinch load. The generator output current and the X-pinch characteristics depended on the X-pinch wire materials in the tests. X-ray backlighting images from the insects showed the significant phase-contrast effect.

Phase contrast neutron imaging at the PULSTAR reactor

Abstract Non-interferometric phase contrast effects have been shown to enhance material edges in neutron images. The achieved contrast enhancement in the image depends upon the neutron coherent scattering lengths of the materials present in the object and the degree of spatial coherence of the neutron beam. Spatial coherence of the beam is achieved using design-based spatial filters, a large L / d ratio (∼10,000) and low average neutron energy. Physically, a large L / d ratio is realized by a pinhole neutron source thereby significantly reducing the neutron beam intensity at the image plane. Thus, performance of such imaging exercises at low/medium intensity neutron sources is associated with additional design considerations that are not needed at high intensity neutron sources, where it has been demonstrated. In the present work, phase contrast neutron imaging was conducted using a suitably designed collimator at the 1-MWth PULSTAR reactor located at North Carolina State University (NCSU). Results of the imaging exercises that depict phase contrast edge enhancement are being presented along with the collimator design. Digital image plate detectors were used to capture images with a range of exposure times between 45 and 120 min.

Quantitative evaluation of single-shot inline phase contrast imaging using an inverse compton x-ray source

Inverse compton scattering (ICS) x-ray sources are of current interest in biomedical imaging. We present an experimental demonstration of inline phase contrast imaging using a single picosecond pulse of the ICS source located at the BNL Accelerator Test Facility. The phase contrast effect is clearly observed. Its qualities are shown to be in agreement with the predictions of theoretical models through comparison of experimental and simulated images of a set of plastic wires of differing composition and size. Finally, we display an application of the technique to a biological sample, confirming the possibility of time-resolved imaging on the picosecond scale.

Breast computed tomography with the PICASSO detector: A feasibility study

The SYRMEP (Synchrotron Radiation for Medical Physics) collaboration has performed, for the first time in the world, a clinical program of mammography with synchrotron radiation. This program provided excellent results, although utilizing a commercial screen-film system as a detector. The PICASSO (Phase Imaging for Clinical Application with Silicon detector and Synchrotron radiation) project has developed a detector prototype capable of fully exploiting the peculiar characteristics of the synchrotron source, utilizing silicon microstrip sensors illuminated in the edge-on geometry and operated in single-photon counting. In this paper the potential of the PICASSO detector in breast computed tomography was evaluated by means of custom phantoms. Very encouraging results have been obtained with severe dose constrains as far as both spatial and contrast resolution are concerned. Moreover, the capability of detecting phase contrast effects was demonstrated, albeit with a higher delivered dose.

Innovative radiographic system to improve the sharpness of radiographs: could a phase-shift effect contribute to improved image-quality for plain computed radiographs for general use?

The aim of this study was to determine whether a high-resolution digital radiography system that was originally developed for mammography could be used for general radiographic purposes by means of a phantom test. This system includes an X-ray tube with a smaller focal point than is generally used for general radiography, and a computed radiography (CR) system to provide the highest spatial resolution. The imaging object and CR plate are intentionally separated to capture an edge-enhancing effect that is the result of a phase-shift (phase contrast) of the X-rays. This system showed greater sharpness and spatial resolution, as well as an equal level of contrast resolution compared to a conventional X-ray system. The image sharpness in this system appears to be at least partially attributable to an edge-enhancing effect produced by the phase-contrast effect, which occurs when X-rays pass the surfaces of objects. This technique may be suitable for clinical use and may contribute to improved image-quality in general radiography.

Towards the clinical application of X-ray phase contrast imaging

Synchrotron-based propagation-based imaging, a type of phase contrast imaging, produces better soft tissue image contrast than conventional radiography. To determine whether the technique is directly transferable to the clinical environment for routine diagnostic or screening imaging, a micro-focus (100 μm spot-size) Molybdenum X-ray source with 0.03 mm molybdenum filtration was installed at a local hospital. Breast tissue samples, excised masses and mastectomies, were obtained directly from surgery and imaged at three geometries. The first geometry was optimised for visualizing phase contrast effects using a ray-line argument, the second was the same as that employed by Konica-Minolta in their commercial phase contrast system, and the third was the conventional contact arrangement. The three images taken of each tissue sample were comparatively scored in a pair-wise fashion. Scoring was performed by radiologist expert in mammography, general radiologists, associated clinicians and radiographers on high-resolution mammography rated monitors at two separate locations. Scoring indicated that the optimised and Konica geometries both outperformed the conventional mammographic geometry. An unexpected complication within the trial was the effect that the scoring platform and the associated display tools had on some of the scorer's responses. Additionally, the trial revealed that none of the conventional descriptors for image quality were adequate in the presence of phase contrast enhancements.

Investigation of physical image characteristics and phenomenon of edge enhancement by phase contrast using equipment typical for mammography

A technique called phase contrast mammography (PCM) has only recently been applied in clinical examination. In this application, PCM images are acquired at a 1.75 x magnification using an x-ray tube for clinical use, and then reduced to the real size of the object by image processing. The images showed enhanced object edges; reportedly, this enhancement occurred because of the refraction of x rays through a cylindrical object. The authors measured the physical image characteristics of PCM to compare the image characteristics of PCM with those of conventional mammography. More specifically, they measured the object-edge-response characteristics and the noise characteristics in the spatial frequency domain. The results revealed that the edge-response characteristics of PCM outperformed those of conventional mammography. In addition, the characteristics changed with the object-placement conditions and the object shapes. The noise characteristics of PCM were better than those of conventional mammography. Subsequently, to verify why object edges were enhanced in PCM images, the authors simulated image profiles that would be obtained if the x rays were refracted and totally reflected by using not only a cylindrical substance but also a planar substance as the object. So, they confirmed that the object edges in PCM images were enhanced because x rays were refracted irrespective of the object shapes. Further, they found that the edge enhancements depended on the object shapes and positions. It was also proposed that the larger magnification than 1.75 in the commercialized system might be more suitable for PCM. Finally, the authors investigated phase-contrast effects to breast tissues by the simulation and demonstrated that PCM would be helpful in the diagnoses of mammography.

Phase contrast Talbot array illuminators

We propose a method for designing an improved phase-only Talbot array illuminator, called a phase contrast Talbot array illuminator (PCTAI), which could be used to generate an array of spots with a special intensity structure and high efficiency. As examples, we designed two types of PCTAIs for generating an array of line and hollow spots, respectively. Some experimental results revealing the phase contrast effect and demonstrating the feasibility of the PCTAIs are also given.

Experimental and clinical studies on the relevance of proton spin tomography in patients with coxarthrosis

We examined 2 in formalin fixed hip specimens from a corpse, 27 patients with coxarthrosis and 3 healthy young volunteers with MRT concerning the illustration of the hip joint and pathological changes by coxarthrosis. Specimen of the femoral head after endoprosthetic operation could be achieved in 18 cases for comparison with MRT. All pathological alterations as cartilage alterations, sclerosis, cysts, effusion, edema, fibrosis were figured with high sensitivity. Cartilage was figured much better by gradient echo sequence with short echo time than by spin echo sequence. Gradient echo sequence made it possible to figure and quantify thinning of cartilage with high sensitivity. Both sequences showed artefacts because of the chemical shift in the area of the cartilage-bone boundary, which impaired especially the judgement of cartilage by spin echo sequence. Gradient echo sequence allowed because of the phase-contrast effect the distinction of hematopoietic and fatty bone marrow and possibly the delineation of bone marrow edema.