In vivo pH is closely related to complicated physiological and pathological processes. Quantitatively probing pH and visualizing pH variation via fluorescence (FL) imaging technique in living cells and organisms is crucial but difficult to accomplish. Herein, green fluorescent carbon dots (CDs) were synthesized, and their distinct advantages of extraordinarily high fluorescence quantum yield (FQY, 71.4%), unique photostability, high selectivity, sterling biocompatibility, appropriate pKa for biosensing, enable CDs to serve as pH-activatable probes for real time quantitative detection of continuous pH fluctuation in living cells, zebrafish, mice and tumors. We believe CDs are presently among the best-of-breed pH probes for comprehensive biomedical applications.