Peri Positions Research Articles

Rh‐Catalyzed Transannulation of Pyridotriazoles with Alkynes and Nitriles.

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A relationship between amide hydrogen bond strength and quinone reduction potential: Implications for photosystem I and bacterial reaction center quinone function

A series of 11 simple phylloquinone derivatives, each lacking the extended phytyl side chain but featuring H-bond donor amides at one or both peri positions, were prepared and some salient physical properties were measured. A correlation between both IR frequency and NMR peak position, as indicators of internal H-bond strength, and the quinone half-wave reduction potential, was observed. These data are consistent with the prevailing hypothesis that quinone carbonyl H-bonding in general, and stronger H-bonds in particular, favorably bias the endogenous quinone’s electrochemical potential toward easier reduction.

Rh-catalyzed transannulation of pyridotriazoles with alkynes and nitriles.

Rh-catalyzed transannulation of pyridotriazoles with alkynes and nitriles.

Peripherally B and N substituted cyclacenes

AM1 (RHF) type semiempirical quantum chemical calculations have been applied to cyclacenes whose fusion points and peri positions of one of their peripheral circuits are substituted with nitrogen and boron, respectively. The structures have been found to be stable but endothermic (except for R=8 and 9) in nature. The nitrogen and boron (the fusion points peri positions, respectively,) substitution have been found to have stabilizing effect on the parent unsubstituted cyclacenes. Some geometrical and physicochemical data are also reported.

Novel Synthesis of a New Skeletal Compound Benzonaphthazepine by Regioselective C—H Activation Utilizing the Intramolecular Coordination of an Amine to Pd.

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Cyclacenes having mono boron or nitrogen atom in the backbone—a theoretical study

Semi-empirical molecular orbital treatment at the level of AM1 unrestricted Hartree–Fock type calculations was performed on the Hückel type boron and nitrogen substituted cyclacenes. Substitution is done either in a peri position or a fusion points. Boron substitution is found to be destabilizing, whereas nitrogen substitution has stabilizing effect on parent cyclacenes.

Novel Synthesis of a New Skeletal Compound Benzonaphthazepine by Regioselective C-H Activation Utilizing the Intramolecular Coordination of an Amine to Pd

The novel synthesis of a new skeletal compound, benzonaphthazepine, from N-bromobenzylnaphthylamine using a Pd reagent is described. In the biaryl coupling reaction of N-bromobenzylnaphthylamine using a Pd reagent, the intramolecular coordination of the benzylamino group to Pd causes regioselective C-H activation at the peri position relative to the amine group on the naphthalene ring, producing benzonaphthazepine in good to excellent yield. The bulkiness of the substituent at C7 on the naphthalene ring affects the regioselectivity of the biaryl coupling reaction.

Role of Metal Ions and Hydrogen Bond Acceptors in the Tautomeric Equilibrium of Nitro-9[(Alkylamino)Amino]-Acridine Drugs

3-nitro-9-[2-(dialkylamino)ethyl)]aminoacridines (alkyl = methyl or ethyl) have been used as ligands towards platinum(If). The end product is a complex in which the acridine acts as a tridentate ligand contributing the two exocyclic nitrogen atoms and one of the two peri carbons. The metallation takes place predominantly at the peri position of the unsubstituted ring. The coordinated acridine is in the imino tautomeric form although, in the free state, it occurs exclusively in the amino form (both in the solid state and in solution). The imino tautomer is considered to be the biologically active form. In the platinated species the N(10)H of the acridine can be involved in strong hydrogen bonding with a chloride ion leading to formation of an association complex, the formation constant has been found to be 1.4±103 M−1. The N(10)H┄CI interaction can influence the tautomeric equilibrium of the acridine dye also in the uncoordinated species, however, the shift in favor of the imino tautomer is not complete.

The Directed Lithiation of Benzenoid Aromatic Systems

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Synthesis and convenient functionalisation of pyridazinofurocoumarins: nitrogenated isosters of potent DNA inhibitors

Pyridazino[3,4- h]psoralens and pyridazino[3,4- j]angelicins are prepared in good yield from resorcinols through a direct, easy and generally applicable synthetic route. The key step in this route is the inverse electron-demand Diels–Alder reaction between linear or angular furocoumarins and 3,6-bis(methoxycarbonyl)-1,2,4,5-tetrazine to give the dicarboxymethylated tetracycles. The ester group in the peri position with respect to the oxygen in the furan ring can be regioselectively transformed to give primary or secondary amides. Similarly, the two ester groups in the tetracycle can be transformed in a high-efficiency process to give bis-amides that can be either symmetrical (from the same amine) or unsymmetrical (from two different amines).

The Directed Lithiation of Benzenoid Aromatic Systems

AbstractDirected metallation using organolithium bases is one of the best ways of regiospecifically elaborating aromatic systems and their substituents. For benzenoid arenes, deprotonation occurs at the ortho, lateral or peri positions. The reasons for each type of reaction will be considered in the context of the propensities of different directing groups for complex formation with the incoming organolithium base, acidification of the reactive site(s) and post‐reaction stabilisation of the metal ion(s). Discussion will concentrate on structural investigations, for the most part by single‐crystal X‐ray diffraction and/or by multinuclear NMR spectroscopy. Theoretical studies will also be incorporated. (© Wiley‐VCH Verlag GmbH & Co. KGaA, 69451 Weinheim, Germany, 2003)

Structural activity relationship between Salmonella-mutagenicity and nitro-orientation of nitroazaphenanthrenes

Nitroazaphenanthrenes (NAphs) and their N-oxides (NAphOs) were synthesized as derivatives with nitrogen atoms in the 1, 4, and 9 positions of phenanthrene rings, and as nitrated derivatives substituted at the 1, 2, 3, 4, 5, 6, 7, and 8 positions of phenanthrene rings. To determine the structure activity relationship of these derivatives, all 19 isomers were bioassayed with Salmonella tester strains. NAphs substituted at the 4, 6, 7 and 8 positions were mutagenic for TA98, and 1-, 2-, and 3-N-9-AphOs, 6-N-1-AphO and 6-N-4-AphO were mutagenic for TA98 and TA100 without the S9 mix, while 5-N-1-AphO and 5-N-9-AphO were non- or weakly mutagenic. Nitrated derivatives, 6-N-4-Aph, 6-N-9-Aph, 6-N-1-AphO, and 6-N-4-AphO, were powerful mutagens for TA98 and TA100. Mutagenicity was enhanced by mutant strains producing nitroreductase, such as YG1021 and 1026, and by those producing O-acetyltransferase, such as YG1024 and 1029. Nitro derivatives substituted at positions 4 and 5 in the phenanthrene rings were perpendicular, while those at positions 2, 3, 6 and 7 were coplanar to the phenanthrene rings. NAphs substituted at the 1 and 8 positions were noncoplanar due to steric hindrance of the aromatic proton at the peri position. On the other hand, 1,5- and 1,8-dinitro-4-azaphenanthrenes showed high mutagenicity for strains TA98 and TA100 in the absence of the S9 mix, and were strongly enhanced by nitroreductase and O-acetyltransferase, over-producing mutants. Therefore, it was found that the mutagenic potency of NAphs and NAphOs was closely associated with the chemical properties and orientation of nitro substitution of aromatic rings.

Synthesis of B/Ga and B/In heteronuclear bidentate Lewis acids: formation of intramolecular pi-arene-gallium(III) and -indium(III) complexes.

Reaction of 1,8-dilithionaphthalene x TMEDA (TMEDA=tetramethylethylenediamine) with dimesitylboron fluoride in diethyl ether followed by treatment with THF affords the Li(THF)(4) salt of dimesityl-1,8-naphthalenediylborate (1). Compound 1-Li(THF)(4) undergoes a ring-opening reaction with trimethyltin chloride to afford high yields of 1-(dimesitylboron)-8-(trimethyltin)naphthalenediyl (2), a compound in which a boryl and a stannyl moiety coexist at the peri positions of a naphthalene core. Compound 2 has been characterized by multinuclear NMR spectroscopy, elemental analysis, and X-ray single-crystal analysis which reveal the existence of a sterically crowded structure. Compound 2 is a useful starting material for the synthesis of other heteronuclear naphthalene derivatives. Thus, the transmetalation reaction of 2 with GaCl(3) or InCl(3) in THF results in high yields of 1-(dichlorogallium)-8-(dimesitylboron)naphthalenediyl (3) and 1-(dichloroindium)-8-(dimesitylboron)naphthalenediyl (4), respectively. These unprecedented boron/gallium and boron/indium heteronuclear bidentate Lewis acids have been characterized by multinuclear NMR spectroscopy, elemental analysis, and X-ray single-crystal analysis. Owing to the presence of a short contact between the ipso-carbon atom of a mesityl group and the heavy Group 13 element (C(ipso)bondGa 2.279(4) A for 3, C(ipso)bondIn 2.442(6) A for 4), compounds 3 and 4 are best described as intramolecular pi-arene complexes and are the first examples of such complexes. As shown by (1)H and (13)C NMR spectroscopy, this pi interaction subsists in solution.

Correlation of polychlorinated naphthalenes with polychlorinated dibenzofurans formed from waste incineration

Isomer composition of polychlorinated naphthalenes (PCNs) was measured for municipal waste incinerator fly ash samples and for emission samples produced from soot and copper-deposit experiments conducted at the United States Environmental Protection Agency (US-EPA). Two types of PCN isomer patterns were identified. One pattern contained specific PCN isomers in which chlorine atoms are substituted as if the peri(α-) position were dechlorinated from the higher chlorinated PCNs one by one. In another pattern, the isomers had a tendency for the chlorine atoms to assume successive positions on the naphthalene ring, which may be caused by specifically oriented chlorination. Some of these isomers increased, together with several polychlorinated dibenzofuran (PCDF) and a few polychlorinated dibenzo- p-dioxin (PCDD) isomers. The ratios between some specific PCN, PCDF, and PCDD isomers measured for the fly ash samples agree with those obtained from the soot and copper-deposit experiments. The observations suggest that these isomers were formed possibly from de novo synthesis utilizing the carbon structure contained in soot under the catalytic effect of a copper compound. Typical isomers for PCNs and PCDFs produced from incineration emissions were identified.

Synthesis of a Remarkably Stable Dehydro[14]annulene.

The substituents at the peri positions of dehydro[14]annulenes 1 have a dramatic effect on the stability of these macrocycles, and lead to derivatives that are stable even at elevated temperatures (up to 190°C).

Structure/energy correlation of bowl depth and inversion barrier in corannulene derivatives: combined experimental and quantum mechanical analysis.

Synthesis of a series of corannulene derivatives with varying bowl depths has allowed for a study correlating the structure (bowl depth) and the energy of bowl inversion. Substituents placed in the peri positions are repulsive and flatten the bowl, thus causing a decrease in the bowl inversion barrier. Conversely, annelation across the peri positions causes a deepening of the bowl, thus an increase in the bowl inversion barrier. Barriers between 8.7 and 17.3 kcal/mol have been measured, and their structures have been calculated using a variety of ab initio methods. The energy profile of an individual corannulene derivative is assumed to fit a mixed quartic/quadratic function from which an empirical correlation of bowl depth and inversion barrier that follows a quartic function is derived. Structure/energy correlations of this type speak broadly of the nature of enzymatic and catalytic activation of substrates.

Resolution and rotational barriers of quinolinone and acridone sulfenamide derivatives: demonstration of the S-N chiral axis.

Achiral (8a) and chiral (8b) N-(2,4-dinitrobenzenesulfenyl)acridone derivatives were synthesized. Addition of the chiral solvating agent (S)- 2,2,2-trifluro-1-(anthryl)ethanol to 8a rendered the enantiotopic groups on the acridone ring diastereotopic and anisochronous, thus allowing the estimation of a lower limit for the rotational barrier about the S-N bond (18.7 kcal mol(-)(1)) by NMR spectroscopy. 8b and the previously reported chiral sulfenamide 5 (Raban, M.; Martin, V. A.; Craine, L. J. Org. Chem. 1990, 55, 4311) were resolved on a Chiracel OD HPLC column. This constitutes the first resolution of stereostable enantiomers of a compound in which the chirality is due only to the presence of the S-N chiral axis. The rotational barriers of both compounds are nearly equal (22.7-22. 8 kcal mol(-)(1) at 303.7 K) and are the largest determined to date for the rotation about the S-N bond in sulfenamides. The relatively high enantiomerization barrier for 8b is remarkable since the peri positions are unsubstituted.

Preparation and conformation of octaethylbiphenylene.

Dimerization of tetraethylbenzyne (generated by reaction of 1, 2-dibromo-3,4,5,6-tetraethylbenzene (8) with 1 equiv of BuLi) afforded in low yield octaethylbiphenylene (3), together with a major product which was characterized as 2,3,4,5,3',4', 5'-heptaethyl-2'-vinylbiphenyl (9). X-ray diffraction indicates that biphenylene 3 adopts in the crystal a conformation of approximate C(2)(h )()symmetry with the ethyl groups within each phenylene ring arranged in an alternated up-down fashion. Notably, pairs of vicinal ethyl groups located at peri positions are oriented in a syn arrangement in the crystal. Low temperature NMR spectroscopy is consistent with the presence in solution of either the crystal conformation or a fully alternated conformation lacking any syn interaction. Molecular mechanics (MM3), semiempirical (AM1, PM3), and ab initio calculations indicate that the crystal conformation is a high energy form, and that the lowest energy conformation is the fully alternated form. The topomerization barrier of the methylene protons of the ethyl groups of 3 is 9.4 +/- 0.1 kcal mol(-)(1), which is between the rotational barriers of 8 and 1,2,3, 4-tetraethylbenzene 7 (9.9 +/- 0.1 and 8.2 +/- 0.1 kcal mol(-)(1), respectively). The similarity in rotational barriers suggests that a given tetraethylphenylene subunit does not markedly affect the rotational barrier of the ethyl groups of the other subunit.

Synthesis of Substituted Indeno[1,2- b]quinoline-6-carboxamides, [1]benzothieno[3,2- b]quinoline-4-carboxamides and 10 H-quindoline-4-carboxamides: Evaluation of Structure–Activity Relationships for Cytotoxicity

New substituted indeno[1,2- b]quinoline-6-carboxamides, [1]benzothieno[3,2- b]quinoline-4-carboxamides and 10 H-quindoline-4-carboxamides were prepared from methyl 2-amino-3-formylbenzoate by a new Friedlander synthesis. Evaluation of these carboxamides for cytotoxicity in a panel of cell lines showed that small lipophilic substituents in the non-carboxamide ring, in a pseudo- peri position to the side chain, significantly increased cytotoxic potency while retaining a pattern of cytotoxicity consistent with a non-topo II mode of action. The methyl-substituted indeno[1,2- b]quinoline-6-carboxamide demonstrated substantial effectiveness (20-day growth delays) in a sub-cutaneous colon 38 in vivo tumor model. This is comparable to that reported for the dual topo I/II inhibitor DACA that is in clinical trial.

The case of the missing acetylene. The mechanism of an intramolecular SN(V) reaction and a new route to 1-methylbenzo[de]quinolines

1-Halogeno-2-(1-naphthyl)alkenes with a dimethylamino group in the peri position are smoothly converted to 1-methylbenzo[de]quinoline under mild conditions, in a process involving the loss of MeBr rather than HBr. The Z-bromide is 45 times more reactive than its E-isomer, and 7 times more reactive than the Z-chloride. These systems were designed to show efficient elimination of HBr, but acetylene is not a likely intermediate. There is good evidence to support both of two alternative addition–elimination mechanisms: a 6-endo-dig route which would involve a “normal” addition–elimination process in an unusual setting; and a tandem 5-exo-dig Michael addition–carbene rearrangement. The evidence so far does not permit a final choice between the two.