The ability to directly deposit materials in ultraminiaturized domains with nanoscale accuracycould play a central role in the realization of some forms of nanotechnology. In this reportwe demonstrate the direct deposition of quantum dots in patterns with ultramicroscale(1–15 µm) andnanoscale (<1 µm) features. Unlike bottom up approaches that require preconfigured patterning steps,this top down ‘direct write’ method should be amenable to the construction ofa large variety of patterns and features essentially ‘on the fly’. To accomplishthe direct writing/deposition of quantum dots we used a system that integrateshigh resolution motion control with microfabricated fluid delivery cartridges.This process is termed FEMTO (fluidics enhanced molecular transfer operation).The methodology demonstrated here may be extended to surface patterning anddeposition of a broad spectrum of other nanoscale materials and thereby createopportunities in a variety of fields ranging from microelectronics to bio/nanotechnology.