The present study aimed to investigate into the feeding ecology of the dominant copepods along a salinity gradient in Chikugo estuary. Copepod composition was studied from samples collected from stations positioned along the salinity gradient of the estuary. Copepod gut pigment concentrations were measured by fluorescence technique and hydrographical parameters such as temperature, salinity, transparency, suspended particulate matter (SPM); pigments such as chlorophyll- a (Chl- a), phaeopigment; and particulate nutrients such as particulate organic carbon (POC) and particulate organic nitrogen (PON) were measured. Two distinct zones in terms of nutrient and pigment concentrations as well as copepod distribution and feeding were identified along the estuary. We identified a zone of turbidity maximum (TM) in the low saline upper estuary which was characterized by having higher SPM, higher POC and PON but lower POC:PON ratios, higher pigment concentrations but lower Chl- a/SPM ratios and higher copepod dry biomass. Sinocalanus sinensis was the single dominant copepod in low saline upper estuary where significantly higher concentrations of nutrients and pigments were recorded and a multispecies copepod assemblage dominated by common coastal copepods such as Acartia omorii, Oithona davisae and Paracalanus parvus was observed in the lower estuary where nutrient and pigment concentrations were lower. Copepods in the estuary are predominantly herbivorous, feeding primarily on pigment bearing plants. However, completely contrasting trophic environments were found in the upper and the lower estuary. It was speculated from the Chl- a and phaeopigment values that copepods in the upper estuary receive energy from a detritus-based food web while in the lower estuary an algal-based food web supports copepod growth. Overall, the upper estuary was identified to provide a better trophic environment for copepod and is associated with higher SPM concentrations and elevated turbidity. The study demonstrates the role of estuarine turbidity maximum (ETM) in habitat trophic richness for copepod feeding. The study points out the role of detritus-based food web as energy source for the endemic copepod S. sinensis in the upper estuary, which supports as nursery for many fish species.
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