BackgroundMood and anxiety are widely associated with physical conditions, but research and treatment are complicated by their overlap, clinical heterogeneity, and manifestation on a spectrum rather than as discrete disorders. In contrast to previous work relying on threshold-level disorders, we examined the association between empirically-derived profiles of mood and anxiety syndromes with physical conditions in a nationally-representative sample of US adolescents. MethodsParticipants were 2,911 adolescents (aged 13-18) from the National Comorbidity Survey-Adolescent Supplement who provided information on physical conditions and reported at least one lifetime mood-anxiety ‘syndrome’ based on direct interviews with the Composite International Diagnostic Interview Version 3.0. Mood-anxiety syndromes reflected 3-level ratings from subthreshold to severe distress/impairment, and subtyped mood episodes. Stepwise latent profile analysis identified mood-anxiety profiles and tested associations with physical conditions. ResultsThree mood-anxiety profiles were identified: “Mood-GAD” (25.6%)—non-atypical depression, mania, generalized anxiety; “Atypical-Panic” (11.3%)—atypical depression, panic; and “Reference” (63.1%)—lower mood and anxiety except specific phobia. Headaches were more prevalent in Mood-GAD and Atypical-Panic than Reference (47.9%, 50.1%, and 37.7%, respectively; p=0.011). Heart problems were more common in Mood-GAD than Atypical-Panic (7.4% v 2.2%, p=0.004) and Reference, with back/neck pain more prevalent in Mood-GAD than Reference (22.5% v 15.3%, p=0.016). LimitationsBroad categories of physical conditions without information on specific diagnoses; replication regarding specificity is recommended. ConclusionsHeart problems and pain-related conditions were differentially associated with specific mood-anxiety profiles. Subtyping depression and anxiety—inclusive of subthreshold syndromes—and their patterns of clustering may facilitate etiologic and intervention work in multimorbidity.