Pacific Coast Research Articles

Interpreting life-history traits, seasonal cycles, and coastal climate from an intertidal mussel species: Insights from 9000 years of synthesized stable isotope data.

Understanding past coastal variability is valuable for contextualizing modern changes in coastal settings, yet existing Holocene paleoceanographic records for the North American Pacific Coast commonly originate from offshore marine sediments and may not represent the dynamic coastal environment. A potential archive of eastern Pacific Coast environmental variability is the intertidal mussel species Mytilus californianus. Archaeologists have collected copious stable isotopic (δ18O and δ13C) data from M. californianus shells to study human history at California's Channel Islands. When analyzed together, these isotopic data provide windows into 9000 years of Holocene isotopic variability and M. californianus life history. Here we synthesize over 6000 δ18O and δ13C data points from 13 published studies to investigate M. californianus shell isotopic variability across ontogenetic, geographic, seasonal, and millennial scales. Our analyses show that M. californianus may grow and record environmental information more irregularly than expected due to the competing influences of calcification, ontogeny, metabolism, and habitat. Stable isotope profiles with five or more subsamples per shell recorded environmental information ranging from seasonal to millennial scales, depending on the number of shells analyzed and the resolution of isotopic subsampling. Individual shell profiles contained seasonal cycles and an accurate inferred annual temperature range of ~ 5°C, although ontogenetic growth reduction obscured seasonal signals as organisms aged. Collectively, the mussel shell record reflected millennial-scale climate variability and an overall 0.52‰ depletion in δ18Oshell from 8800 BP to the present. The archive also revealed local-scale oceanographic variability in the form of a warmer coastal mainland δ18Oshell signal (-0.32‰) compared to a cooler offshore islands δ18Oshell signal (0.33‰). While M. californianus is a promising coastal archive, we emphasize the need for high-resolution subsampling from multiple individuals to disentangle impacts of calcification, metabolism, ontogeny, and habitat and more accurately infer environmental and biological patterns recorded by an intertidal species.

Growth Rings in Nine Tree Species on a Neotropical Island with High Precipitation: Coco Island, Costa Rica

Coco Island, located 530 km off the Pacific coast of Costa Rica, experiences rainfall of over 7000 mm/year. This study aims to explore the distinctiveness of the growth ring boundaries and the dendrochronological potential (DP) of nine tree species found on Coco Island. The distinctiveness was classified into type 1: density variation; type 2: marginal parenchyma; type 3: fiber/parenchyma pattern; type 4: vessel distribution, and type 5: fiber band. Cecropia pittieri and Henriettella fascicularis lacked growth ring boundaries and, therefore, did not present any DP. Growth ring type 1 occurred in Ardisia compressa, Henriettea succosa, Henriettella odorata, and Psychotria cocosensis. Ocotea insularis and Sacoglottis holdridgei exhibited type 5 growth rings, with sufficient distinctiveness. Finally, Eugenia pacifica possessed growth rings of type 3 and type 4, but with limited distinctiveness in the growth ring boundary. In relation to DP, A. compressa, E. pacifica, and P. cocosensis presented low DP; meanwhile, H. succosa, H. odorata, O. insularis, and S. holdridgei demonstrated medium DP. If these species are found in abundance with a diameter exceeding 60 cm, a cross-dating technique like bomb-spike dating is established to confirm the annual growth of the ‘bands’. As these species exhibit some DP, they can be used to establish a chronology spanning 50–130 years, which could be utilized to create climate proxies or derive ecologically and climatically meaningful information. Additionally, the information presented could pave the way for future studies of sites that also have very high rainfall, where trees are presumed to lack annual growth rings.

Information-theoretic applications to Hupa verbal morphology

Hupa (Na:tinixwe Mixine:whe’) is a Pacific Coast Dene language spoken in Hoopa Valley in Northern California. Like its Dene sisters, Hupa exhibits complex verbal morphology which has attracted decades of theoretical research. One approach that has yet to have been applied to these languages is information theory. Previous information-theoretic research into verbal morphology has uncovered a cross-linguistic trend of grouping predictive information closer together and finding morphemes that are more mutually-informative to the root closer to the root, which in turn reduces overall surprisal and is easier on memory constraints. However, these studies analyzed prominently suffixing languages of Afro-Eurasia. This project is the first application of these information-theoretic concepts to a Dene language to investigate if these approaches also apply to explain morpheme order in a low-resource, Indigenous American language with intricate, prominently-prefixing morphology. The results indicate similar findings to previous research. Hupa demonstrates a word-level linear morpheme order that, on average, orders most mutually-informative morphemes closest to the verb root compared to a randomized baseline. This morpheme order also resulted in an average surprisal that was more comparable to optimized morpheme orders than a randomized baseline. Morpheme-type mutual information, however, demonstrates the discrepancies between word- and templatic-level information content in Hupa, which exemplifies the word-level efficiency that Hupa shares with other languages despite the typological uniqueness of its morphological grammar.

Assessing selection potential for Pacific oyster (Crassostrea gigas) to a North American OsHV-1 μvar: Comparing two experimental assay methods

Ostreid Herpesvirus - 1 is a global threat to Pacific oyster aquaculture as catastrophic farm losses have occurred where OsHV-1 microvariants (μvars) become endemic. Genetic selection has proven effective for increasing survival to OsHV-1 exposure in multiple Pacific oyster breeding programs, but a novel μvar detected in San Diego Bay California has the potential to severely impact commercial aquaculture along the North American Pacific coast as no OsHV-1 μvar selected population is available commercially. Using a Molluscan Broodstock Program population descending from imports originating in the Miyagi prefecture (Japan), we evaluated the potential for genetic selection to improve survival against the San Diego Bay OsHV-1 μvar using a laboratory trial. Two experimental methods were evaluated, a common garden method where all 15 full-sibling families were pooled, and a petri dish method, where each family was confounded within replicate. No striking differences were found between experimental methods, and both experiments displayed high heritability (0.69 and 0.64) of the tested trait, a broad range of estimated breeding values, and a moderate prediction accuracy for the survival trait. A significant genotype-by-environment interaction occurred, highlighting variability in laboratory-based disease challenges, but the two experiments yielded similar results with minor to moderate re-ranking of mean family survival. Overall, the Miyagi population of Pacific oysters curated by the Molluscan Broodstock Program is a promising population to use for artificial selection to increase survival against San Diego Bay OsHV-1 μvar in attempts to obviate farm losses if the virus expands its currently isolated range.

Two new American species of Aberrapex (Eucestoda: Lecanicephalidea: Aberrapecidae) from myliobatid stingrays (Batoidea: Myliobatidae)

Here I describe Aberrapex panamensis sp. nov., a parasite of the rough eagle ray Aetomylaeus asperrimus from the eastern Pacific coast of Panama, and Aberrapex catarinensis sp. nov., found in Myliobatis goodei off southern coast of Santa Catarina, Brazil. Aberrapex panamensis sp. nov. is the second record of Aberrapex Jensen, 2001 for the eastern Pacific Ocean and A. catarinensis sp. nov. is the fifth species of the genus registered in southwestern Atlantic Ocean. The two new species are morphologically distinct from all their congeners. Aberrapex panamensis sp. nov. and A. catarinensis sp. nov. can be distinguished from the majority of their congeners by the microthrix pattern on the scolex surface, number of proglottids and testes, length and width of the scolex, uterus extension, and presence and extension of an external seminal vesicle. The description of these two new species of lecanicephalideans expands the knowledge of this cestode order, with A. panamensis sp. nov. being the third species of the genus reported from Aetomylaeus Garman, and A. catarinensis sp. nov. being the sixth species of Aberrapex reported from Myliobatis Cuvier.

First Report of Seropositivity to Trypanosoma cruzi in Mexican Afro-Descendants from Guerrero and Oaxaca States.

Mexican Afro-descendant is a population poorly studied in many aspects, between them the infectious diseases that they suffer. This population is mainly found in the country's Pacific (Oaxaca and Guerrero states) and Atlantic (Veracruz) coast. In these regions, a diversity of triatomine vectors of the Chagas disease is found. Also, all the genotypes of Trypanosoma cruzi DTUs have been reported. That is why the present study aimed to study the presence of antibodies against T. cruzi and cardiac pathology associated with the Chagas disease in the Mexican Afro-descendant population of Guerrero and Oaxaca. ELISA, Western blot, and recombinant antigen's ELISA were used to evaluate the seropositivity of these communities. Furthermore, an electrocardiographic study and evaluation of risk factors associated with T. cruzi infection in the Oaxaca and Guerrero populations were conducted. 26.77% of the analyzed population was positive for two serological tests. These percentages are higher than the previously reported for the mestizo population in similar studies. Electrocardiographic results showed cardiac disorder associated with the Chagas disease in the population. Also, risk factors were identified associated with the men's activities in the outdoor working areas.

Climatic and disturbance impacts on temperate rainforest development since ∼18 ka in central-west Isla Grande de Chiloé (42.7°S)

Understanding the role of disturbance regimes on terrestrial ecosystems is often compounded by the paucity of time series sufficiently long and detailed to capture triggering events and the sequence of changes in species composition, community structure and dynamics along a time continuum until the present. Adding complexity to this problem, disturbance regimes and the distribution/competitive interactions of participating species may vary in time with shifts in mean climatic conditions and variability. Here we present results from sediment cores we collected from small closed-basin lakes near the Pacific coast of central Isla Grande de Chiloé, a sector with the lowest seasonality and recurrence of explosive volcanic events in Northwestern Patagonia (NWP). Our aim is examining vegetation development since the last glaciation and exploring potential climatic and disturbance impacts. We found rapid establishment of closed-canopy rainforests, which have persisted with little variation in terms of physiognomy until the present. Significant changes in species composition, structure, dynamics, and rates of change are evident over the last ∼18,000 years, along with fire maxima at ∼16.7 ka, ∼12.7 ka, between ∼11.7-9 ka, from ∼2 ka to the present, and minima in the interim. Fires precede major increases in disturbance favored taxa, which correspond in timing with fire activity maxima at NWP scale. The most recent ∼2000 years coincide with the highest number and ubiquity of human occupations at central-west and NWP scale, raising the possibility that fires were driven by human activities near our study sites. We detect a conspicuous increase in disturbance-favored trees ∼150 years after deposition of the Puma Verde Tephra (∼8.3 ka) and interpret their subsequent maintenance by frequent blowdown events after ∼7.5 ka in exposed sectors of the Coastal Range. We posit that enhanced storminess driven by stronger Southern Westerly Winds since ∼7.5 ka has favored early successional opportunistic trees in detriment of old-growth forests dominated by shade-tolerant species, generating a spatial mosaic of forest patches or gaps in different stages of recovery.

Non-indigenous species and their realized niche in tidepools along the South-East Pacific coast

Non-indigenous species (NIS) have the potential to colonize and become established in a wide range of coastal habitats. Species with broad environmental tolerances can quickly adapt to local conditions and expand their niches along environmental gradients, and even colonize habitats with extreme abiotic conditions. Here we report and document the distribution of eight marine NIS (four seaweed and four invertebrate species) found in tidepools along a 3000 km latitudinal gradient along the Pacific coast of Chile (18.4°S to 41.9°S). The seaweed NIS Codium fragile, Capreolia implexa, Schottera nicaeensis and Mastocarpus latissimus were mostly distributed towards high latitudes (i.e., more southerly locations), where temperatures in tidepools were low. The invertebrate NIS Anemonia alicemartinae, Ciona robusta, Bugula neritina and Bugulina flabellata were more common towards low latitudes, where high temperatures were registered in the tidepools. Across the intertidal gradient, seaweed NIS were mostly found in pools in the mid and low intertidal zone, while invertebrate NIS occurred mostly in pools from the mid and upper intertidal zones. The realized niche spaces of NIS (based on the Outlying Mean Index, OMI) in the study area were mainly influenced by environmental conditions of temperature and salinity (along the latitudinal and intertidal gradients), while other tidepool characteristics (depth, surface area, exposition, and complexity) only had minor effects. Five of the eight NIS exhibited a realized niche space coinciding with the average tidepool environmental conditions, while marginal niches were occupied by species with affinities for specific temperatures and salinities along the latitudinal and intertidal gradients. Our results indicate that physiological tolerances to environmental factors play a fundamental role in the distribution of seaweed and invertebrate NIS in tidepools along the Chilean coast. This study confirms that tidepools offer suitable conditions for some seaweed and invertebrate NIS, potentially facilitating their invasion into new natural habitats.

Recent trends in agriculturally relevant climate in Central America

AbstractThis study examines the climatology and trends in climate in Guatemala, Honduras, and El Salvador over the past four decades, against the background of potential impacts on rainfed agriculture, livelihoods, and migration. The results show that there has been a significant warming of surface temperatures, an earlier start to the monsoon, a drier and longer mid‐summer drought, and a delay in the second peak of precipitation from September to October. These changes have led to an increase in vapour pressure deficit (VPD) in northern Guatemala and along the Pacific coast in winter. High VPD can stress plants and lead to reduced yields. The study also finds that the thresholds that cause a decline in coffee yield have already been reached in El Salvador, but the average VPD has also risen in Guatemala and Honduras over the past 42 years. Maize yields have also been negatively affected with an inverse relationship with daily maximum temperatures during the summer flowering season. Observed changes and trends in these climate factors are believed to have direct implications for crop yields and livelihoods, potentially driving shifts in migration patterns.

Experimental Study on Erosion Process of Expressway Embankment Subjected to Tsunami After Earthquake

On March 11, 2011, the Great East Japan Earthquake triggered tsunamis that reached extensive areas along Japan’s Pacific coast. There have been instances where embankments built on plains for expressways mitigated the impact of tsunami damage. In the vicinity of the Sendai-tobu highway, the presence of an embankment approximately 10 m high altered the course of the advancing tsunami, thereby preventing flooding. Establishing a multiplied defense system using road embankments necessitates understanding the deformation and collapse mechanisms of road embankments impacted by tsunamis following seismic motion. In this study, overtopping experiments were conducted by first applying seismic motion to model embankments, followed by introducing the first wave of breaking bores, and then simulating prolonged overtopping by the tsunami. The experimental findings indicated that within the embankments impacted by the tsunami, there was an immediate increase in what is presumed to be pore air pressure following the arrival of the breaking bores, followed by a rise in pore water pressure during subsequent overtopping. Moreover, embankments subjected to seismic motion exhibited accelerated erosion following the overtopping. These results imply that when embankments settle due to an earthquake, leading to relatively higher anticipated inundation depths and the potential for overtopping, it is crucial to implement measures to prevent the settlement of the crest for embankments expected to serve as part of a multiplied defense system.

A Case for Trans-Regional Intertidal Research in Unstudied Areas in the Northeast and Southeast Pacific: Filling the Gaps

Large areas of the Pacific coast of the Americas remain unstudied regarding their intertidal ecosystems. Given the increasing disturbance related to human impacts on intertidal ecosystems, it is essential to gather census data on the biological composition of poorly studied regions so that a framework for future monitoring and management can be developed. Here, we synthesize the available research on intertidal communities along the Pacific rim to support the goal to fill bioregional gaps in knowledge in three less-studied areas in Southeast Alaska and Peru. A census of taxonomic and functional group hierarchies in these communities should include the use of various measures of alpha and beta diversity to provide a metric of temporal and spatial comparisons. A narrower-scale approach focusing on foundation species that harbor algal and invertebrate communities and serve as buffers against environmental stresses should also be conducted. Conducting a comprehensive census in poorly studied or unstudied areas will contribute to a better understanding of the response to disturbances caused by oil spills, El Niño and marine heatwaves and provide a latitudinal continuum of scientific knowledge about the biodiversity and ecosystem functioning in rocky intertidal systems on a trans-regional scale.

Social structure and site fidelity of an oceanic delphinid: the rough‐toothed dolphin (Steno bredanensis) off the southwest Pacific coast of Mexico

AbstractRough‐toothed dolphins (Steno bredanensis) typically inhabit deep oceanic waters from tropical to temperate waters worldwide. However, their ecology and behavior remain poorly understood. We investigated site fidelity and social structure of rough‐toothed dolphins using photo‐identification data collected between 2014 and 2022 in the continental shelf waters of the southwestern coast of Mexico. A total of 133 groups of rough‐toothed dolphins were recorded. Mean group size was 4.9 individuals (SD = 4.5), and dolphins were encountered in waters of a mean depth of 110 m (SD = 188). Of 228 individuals identified, 55% were observed once, 39% were seen between two and four times, and 6% were seen five times or more. Site fidelity analysis suggests three levels of site fidelity: transients, occasional visitors, and regular visitors, which are likely to affect the social structure. Through network analysis, nonrandom social patterns were identified (S = 1.25 ± 0.26) and dolphins exhibited both preferences and avoidances of social partners. Cluster analysis suggested significant divisions within the population (Q = 0.43 ± 0.05). Despite limitations related to sample size and design, this preliminary study suggests that rough‐toothed dolphins are best characterized by a fission‐fusion society, which is similar to most coastal delphinid populations.

First Eocene record of a bangialean rhodophyte (the endolithic microboring Conchocelichnus seilacheri) and coralline red algae from the Pacific Coast of North America

First Eocene record of a bangialean rhodophyte (the endolithic microboring Conchocelichnus seilacheri) and coralline red algae from the Pacific Coast of North America

Congenital Syphilis Prevention Challenges, Pacific Coast of Colombia, 2018-2022.

High incidences of congenital syphilis have been reported in areas along the Pacific coast of Colombia. In this retrospective study, conducted during 2018-2022 at a public hospital in Buenaventura, Colombia, we analyzed data from 3,378 pregnant women. The opportunity to prevent congenital syphilis was missed in 53.1% of mothers because of the lack of syphilis screening. Characteristics of higher maternal social vulnerability and late access to prenatal care decreased the probability of having >1 syphilis screening test, thereby increasing the probability of having newborns with congenital syphilis. In addition, the opportunity to prevent congenital syphilis was missed in 41.5% of patients with syphilis because of the lack of treatment, which also increased the probability of having newborns with congenital syphilis. We demonstrate the urgent need to improve screening and treatment capabilities for maternal syphilis, particularly among pregnant women who are more socially vulnerable.

Performance of high-resolution MUR satellite sea surface temperature data as a proxy for near-surface in situ temperatures on neotropical reefs

As ocean temperatures increase, so does the need for accurate, regular, and widespread temperature data. This is especially important for researchers studying corals, which can be pushed over their bleaching thresholds by small, sustained changes in water temperature. Satellite data products offer longitudinal estimates of sea surface temperature (SST) taken at regular intervals without the ongoing costs and geospatial limits associated with underwater temperature loggers. However, previous work indicates satellite data are sometimes characterized by significant temperature biases, particularly in stratified coastal waters. Here, we compared the foundation sea surface temperature (fSST) estimated from a highly processed, gridded satellite data set (GHRSST MUR L4 Global SST) to in situ temperature (IST) data collected from coral reef habitats in the top 20 m of the water column at 19 sites in Panama. Comparisons between Pacific and Caribbean coasts and between upwelling and non-upwelling seasons provide a robust test of the utility of this product to estimate subsurface temperatures. The mean differences between fSST and IST show that MUR fSST accurately reflects temperatures at shallow (<9 m) depths on the Caribbean coast (mean bias ≤0.55°C ± standard error (SE) 0.01°C) and during the non-upwelling season on the Pacific coast (mean bias ≤0.26°C ± SE 0.03°C). MUR fSST poorly reflects IST during the Pacific upwelling season, especially at sites 12 m and deeper. In such cases, 66% of satellite estimates deviated from ISTs by >1°C. Our findings underscore how highly processed SST data products should be ground-truthed before being used as a substitute for IST, especially in upwelling areas.

Run Up Reflection And Stability Coefficients For Ordered Cube Slopes With Energy Dissipation

The results of an experimental investigation, aimed at analyzing the water flow, stability of the components, and the reflection coefficient of a slope consisting of concrete cubes arranged in an organized manner, similar to a paving stone style, alongside larger blocks to enhance overall roughness, are presented. The experiment took place in the wave flume and basin at the University of Costa Rica, testing wave ranges typical of the Pacific coasts of Central America, characterized by long swell periods.

Spectral Wave Characterization Of The Pacific Coast Of Costa Rica

The results of the analysis of the wave measurement campaigns on the Pacific coast of Costa Rica are presented. After analyzing more than 14000 spectral shapes from sea states, it has been determined that many of them present 2 or more swell peaks, so it was proposed to perform a wave characterization in which 8 different types of spectra were defined to include all the data collected. Also, verifications were carried out in these sea states to check the reliability of many of the approximations usually used in coastal engineering that assume narrow-band spectra, such as the JONSWAP type.

CHARACTERIZATION OF MICROPLASTICS IN MARINE SEDIMENTS FROM THE GULF OF TEHUANTEPEC, MEXICAN PACIFIC

Microplastics (MPs), a universal pollutant is widely distributed in sediments, which attracted the environmental researchers worldwide. MPs are harmful may adsorb toxic compounds present in the environment, which can be ingested by benthic organisms and easily transfer to humans. We investigated the distribution of MPs and its types in beach sediments from the Tehuantepec River mouth, Gulf of Tehuantepec, Mexican Pacific coast. MPs are categorized by their size, shape, color, and polymer types. 73 % of MPs detected are < 5 mm in size. Fiber and colorless are mostly dominated in all samples. The fibers are weathered and degraded with adhered particles on their surfaces. The polymer types detected are polyacrylamide (PAM) and poly(methyl acrylate) (PMA), which are rarely reported in Mexico beach sediments. The prevalence of colorless MPs at the Gulf of Tehuantepec beach needs further attention.

The 2022 Tonga Tsunami on the Pacific and Atlantic Coasts of the Americas

AbstractThe Hunga‐Tonga volcano eruption on 15 January 2022 generated tsunami waves that impacted both the Pacific and Atlantic coasts of the Americas. A unique feature of this event was the dual tsunami generation mechanism, which led to motions with long (several days) ringing and slow energy decay. The first ocean waves to reach the coast were “atmospheric tsunamis” generated by atmospheric Lamb waves that propagated with the speed of sound (∼314 m/s) and circled the globe in both directions several times before being fully attenuated. The second type of ocean waves were classical “oceanic tsunami” waves forced directly by the volcanic eruption and which propagated across the Pacific at roughly 2/3 the speed of the atmospheric waves. This study focuses on time series of the Hunga‐Tonga event recorded by tide gauges, microbarographs and Deep‐ocean Assessment and Reporting of Tsunamis on and off the Pacific coasts of North and Central America and in the Gulf of Mexico. Atmospheric tsunami waves only were recorded in the Gulf of Mexico, where the sea level response to the second, westward (shoreward) propagating atmospheric wave was stronger than to the first, eastward (seaward) propagating wave. Along the Pacific coast, the atmospheric tsunami waves were approximately 3–4 times smaller than the oceanic tsunami waves, which at several Mexican stations exceeded 2 m in height. The broad frequency range of 0.2–0.25 to 30 cph spanned by the oceanic tsunami in the Pacific indicates that the “effective” source area for the oceanic waves was more extensive than initially proposed.

XWaveNet: Enabling uncertainty quantification in short-term ocean wave height forecasts and extreme event prediction

To aid accurate short-term forecast of wave heights and extreme events prediction from buoy data, a deep learning approach is proposed. Wave heights are forecasted up to 72 h in advance from multivariate meteorological and oceanographic data, followed by quantification of uncertainty in the forecasted values, and estimation of exceedance probabilities for extreme event conditions. Using Monte Carlo dropout technique, network regularization and forecast uncertainty assessment were performed. To forecast wave heights, a stacked long short-term memory (LSTM) model was trained on historical buoy data augmented with positionally encoded features. Per comparative evaluation of different models, across the 72 h forecast horizon, positionally encoded temporal attributes resulted in a mean prediction error and forecast uncertainty of only 3 % and 13.5 %, respectively. Contrarily, without temporal feature augmentation mean error was 5 % and uncertainty, 15 %. Therefore, the former model was ensembled with a Random Forest model for exceedance probability estimation. The hybrid model yielded a 21.4 % better separability between the extreme and normal observations in the test data from a nearby buoy in the northern Gulf of Mexico than individual models. All the four extreme events in the test set were correctly predicted with 97 % mean accuracy. Further evaluation of the deep ensemble model on 5 other spatially diverse buoy datasets from the Gulf of Mexico, Atlantic and Pacific coasts, suggested excellent generalizability for short-term wave forecasts and extreme event prediction, with an average maximum error of just 5.2 % across all the 6 buoy test datasets and the entire forecast horizon.