Oxygen Minimum Zone Research Articles

Role of physical processes in regulating the biological responses in the Eastern Arabian Sea during the late southwest monsoon

Understanding physical properties and associated biological responses in the marine ecosystem is critical for fisheries and assessing the ocean’s role in determining the fate of anthropogenic carbon dioxide emissions. This study reports the different roles of southwest monsoon (SWM) upwelling, oceanic fronts, and mesoscale eddies in supplying nutrients and fueling phytoplankton production in the eastern Arabian Sea (EAS). In-situ measurements of physical parameters along with the distribution of biogeochemical parameters in the 100 m water column over a wide latitudinal transect from 8°N to 21°N (Station II-1 to II-14 at 1° interval) along the 68°E were carried out during the late SWM (September 11–19) of 2017. We found distinct features in the study area from the in-situ measurements and satellite data. Primarily, oceanic fronts along with higher instabilities caused vertical mixing at stations II-6, and II-10 (13°N and 17°N). Secondly, eddy-induced lateral advection of high productive water from the Western Arabian Sea (WAS) resulted in high phytoplankton biomass at stations II-7, and II-8 (14°N and 15°N), which led to high concentrations of pigments (chlorophyll-a (Chl-a) and fucoxanthin). SWM upwelling induced higher phytoplankton biomass at northern stations II-13 and II-14 and is evident from the higher total organic carbon (TOC), high total bacterial count (TBC) and Chl-a concentration (up to 0.371μg/L at II-14). The difference in time lag for vertical mixing at II-6 and II-10 are responsible for the contrasting biological responses in these stations. The present study showed that along with SWM upwelling, eddy-induced lateral advection from WAS and oceanic fronts are also increasing phytoplankton biomass in the EAS. The present study suggests that the high phytoplankton biomass prompted by upwelling, oceanic fronts, and mesoscale eddies can influence CO2 sequestration and the prevailing subsurface oxygen minimum zone in the EAS.

Stagewise collapse of biotic communities and its relations to oxygen depletion along the north margin of Nanpanjiang Basin during the Permian–Triassic transition

The process of marine ecosystem collapse during the Permian–Triassic mass extinction may have varied in different paleogeographic settings and the intensity of oxygen depletion changed with different water depths. It remains largely unknown about the detailed biotic community collapse and its relation to paleo-redox condition in the deep-water basin. At the Kejiao section in the Nanpanjiang Basin of South China, the continuous sedimentation sequences and complete fossil records from the Changhsingian of Permian to the lowest Triassic provide a unique opportunity to study the progressive biotic crisis associated with oxygen deficiency in a deep-water setting. Here, we document high-resolution records of both the biodiversity dataset of different taxa and the redox data from the Kejiao section to achieve a new understanding of ecosystem deterioration associated with changes of redox conditions. The redox evolution revealed by changes in pyrite framboid size and morphology shows a change trend from lower dysoxic to oxygenated, and then to dysoxic interrupted by oxygenated and anoxic conditions in the late Changhsingian, and ending with euxinic conditions in the earliest Triassic. 60 species in 41 genera from radiolarians, bivalves, brachiopods and cephalopods were identified in the section and their occurrences show two pulses of extinction. The first pulse corresponds to the reduction in species richness of planktonic radiolarians and nektonic cephalopods, and the second pulse is documented by the wipe out of benthic brachiopods and remnant nektonic cephalopods and the decline in the species richness of benthic bivalves. This indicates the collapse of plankton and most nekton communities is ahead of the counterpart of benthos in the deepwater setting, supporting what observed in other sections in South China. The plankton and nekton communities inhabited water columns and the benthic community dwelled in the bottom water. Thus, the stagewise collapse of communities might be contributed by the expansion/migration, in particular, the downward expansion of Oxygen Minimum Zone (OMZ) documented by the information from pyrite framboids and the sedimentation.

Using machine learning and Biogeochemical-Argo (BGC-Argo) floats to assess biogeochemical models and optimize observing system design

Abstract. Numerical models of ocean biogeochemistry are becoming the major tools used to detect and predict the impact of climate change on marine resources and to monitor ocean health. However, with the continuous improvement of model structure and spatial resolution, incorporation of these additional degrees of freedom into fidelity assessment has become increasingly challenging. Here, we propose a new method to provide information on the model predictive skill in a concise way. The method is based on the conjoint use of a k-means clustering technique, assessment metrics, and Biogeochemical-Argo (BGC-Argo) observations. The k-means algorithm and the assessment metrics reduce the number of model data points to be evaluated. The metrics evaluate either the model state accuracy or the skill of the model with respect to capturing emergent properties, such as the deep chlorophyll maximums and oxygen minimum zones. The use of BGC-Argo observations as the sole evaluation data set ensures the accuracy of the data, as it is a homogenous data set with strict sampling methodologies and data quality control procedures. The method is applied to the Global Ocean Biogeochemistry Analysis and Forecast system of the Copernicus Marine Service. The model performance is evaluated using the model efficiency statistical score, which compares the model–observation misfit with the variability in the observations and, thus, objectively quantifies whether the model outperforms the BGC-Argo climatology. We show that, overall, the model surpasses the BGC-Argo climatology in predicting pH, dissolved inorganic carbon, alkalinity, oxygen, nitrate, and phosphate in the mesopelagic and the mixed layers as well as silicate in the mesopelagic layer. However, there are still areas for improvement with respect to reducing the model–data misfit for certain variables such as silicate, pH, and the partial pressure of CO2 in the mixed layer as well as chlorophyll-a-related, oxygen-minimum-zone-related, and particulate-organic-carbon-related metrics. The method proposed here can also aid in refining the design of the BGC-Argo network, in particular regarding the regions in which BGC-Argo observations should be enhanced to improve the model accuracy via the assimilation of BGC-Argo data or process-oriented assessment studies. We strongly recommend increasing the number of observations in the Arctic region while maintaining the existing high-density of observations in the Southern Oceans. The model error in these regions is only slightly less than the variability observed in BGC-Argo measurements. Our study illustrates how the synergic use of modeling and BGC-Argo data can both provide information about the performance of models and improve the design of observing systems.

How does the phytoplankton–light feedback affect the marine N2O inventory?

Abstract. The phytoplankton–light feedback (PLF) describes the interaction between phytoplankton biomass and the downwelling shortwave radiation entering the ocean. The PLF allows the simulation of differential heating across the ocean water column as a function of phytoplankton concentration. Only one third of the Earth system models contributing to the 6th phase of the Coupled Model Intercomparison Project (CMIP6) include a complete representation of the PLF. In other models, the PLF is either approximated by a prescribed climatology of chlorophyll or not represented at all. Consequences of an incomplete representation of the PLF on the modelled biogeochemical state have not yet been fully assessed and remain a source of multi-model uncertainty in future projection. Here, we evaluate within a coherent modelling framework how representations of the PLF of varying complexity impact ocean physics and ultimately marine production of nitrous oxide (N2O), a major greenhouse gas. We exploit global sensitivity simulations at 1∘ horizontal resolution over the last 2 decades (1999–2018), coupling ocean, sea ice and marine biogeochemistry. The representation of the PLF impacts ocean heat uptake and temperature of the first 300 m of the tropical ocean. Temperature anomalies due to an incomplete PLF representation drive perturbations of ocean stratification, dynamics and oxygen concentration. These perturbations translate into different projection pathways for N2O production depending on the choice of the PLF representation. The oxygen concentration in the North Pacific oxygen-minimum zone is overestimated in model runs with an incomplete representation of the PLF, which results in an underestimation of local N2O production. This leads to important regional differences of sea-to-air N2O fluxes: fluxes are enhanced by up to 24 % in the South Pacific and South Atlantic subtropical gyres but reduced by up to 12 % in oxygen-minimum zones of the Northern Hemisphere. Our results, based on a global ocean–biogeochemical model at CMIP6 state-of-the-art level, shed light on current uncertainties in modelled marine nitrous oxide budgets in climate models.

Pacific Decadal Oscillation Influences Tropical Oxygen Minimum Zone Extent and Obscures Anthropogenic Changes

AbstractObservations suggest that the tropical Pacific Ocean has lost oxygen since the 1960s leading to the expansion of its oxygen minimum zone (OMZ). Attribution to anthropogenic forcing is, however, difficult because of limited data availability and the large natural variability introduced by the Pacific Decadal Oscillation (PDO). Here, we evaluate the PDO influence on oxygen dynamics and OMZ extent using observations and hindcast simulations from two global ocean circulation models (NEMO‐PISCES, MOM6‐COBALT). In both models, the tropical Pacific oxygen content decreases by about 30 Tmol.decade−1 and the OMZ volume expands by 1.3 × 105 km3.decade−1 during PDO positive phases, while variations of similar magnitude but opposite sign are simulated during negative phases. Changes in equatorial advective oxygen supply, partially offset by biological demand, control the oxygen response to PDO. Observations which cover 39% of the tropical Pacific volume only partially capture spatio‐temporal variability, hindering the separation of anthropogenic trend from natural variations.

Nitrite Oxidation Across the Full Oxygen Spectrum in the Ocean

AbstractFixed nitrogen limits primary productivity in most areas of the surface ocean. Nitrite oxidation is the main source of nitrate, the most abundant form of inorganic fixed nitrogen. Even though known as an aerobic process, nitrite oxidation is not always stimulated by increased oxygen concentration, and nitrite oxidation occurs in layers of oxygen minimum zones (OMZs) where oxygen is not detectable. Nitrite‐oxidizing bacteria, known since their original isolation as aerobes, were also detected in these layers. Whether and how nitrite oxidation is occurring in the anoxic seawater is debated. Here, we reassess recent advances in marine nitrite oxidation in OMZ regions using previous work and new data sets we collected in two Pacific OMZs. We analyze the complex relationship between nitrite oxidation and oxygen. We discuss potential mechanisms explaining nitrite oxidation in different layers of OMZs based on recent findings and propose future directions to resolve the controversial question of apparently anaerobic nitrite oxidation in anoxic layers.

Trace element composition of modern planktic foraminifera from an oxygen minimum zone: Potential proxies for an enigmatic environment

Oxygen limited marine environments, such as oxygen minimum zones, are of profound importance for global nutrient cycling and vertical habitat availability. While it is understood that the extent and intensity of oxygen minimum zones are responsive to climate, the limited suite of viable proxies for low oxygen pelagic environments continues to pose a real barrier for paleoclimate interpretations. Here we investigate the proxy potential of an array of trace element (Mg, Mn, Zn, and Sr) to Ca ratios from the shells of Globorotaloides hexagonus, a planktic foraminifer endemic to tropical through temperate oxygen minimum zones. A species-specific relationship between Mg/Ca and temperature is proposed for quantitative reconstruction of oxygen minimum zone paleotemperatures. Both Mn/Ca and Zn/Ca ratios vary with oxygen concentration and could be useful for reconstructing G. hexagonus habitat where the primary signal can be d\istinguished from diagenetic overprinting. Finally, a robust correlation between Sr/Ca ratios and dissolved oxygen demonstrates a role for Sr as an indicator of oxygen minimum zone intensity, potentially via foraminiferal growth rate. The analysis of these relatively conventional trace element ratios in the shells of an oxygen minimum zone species has tremendous potential to facilitate multiproxy reconstructions from this enigmatic environment.

Astrochronology of the Aptian stage and evidence for the chaotic orbital motion of Mercury

The Aptian stage, between ∼113 and ∼121 million years ago (Ma), was punctuated by a succession of Oceanic Anoxic Events (OAEs), recording extreme global warmings, dramatic expansions of the ocean's oxygen minimum zones, along with perturbations to the biotic and carbon cycles. However, the chronology of the Aptian stage is poorly constrained, impacting the duration and timing of OAEs. Using a greatly expanded sedimentary composite record (380 m) of key outcropping sections in the Vocontian Basin (SE France) combined with available radiometric dates and correlations to a set of astronomical solutions, we provide a constrained absolute astrochronology of the Aptian stage. The 405 kyr (gVenus–gJupiter) eccentricity astronomical timescale indicates a minimal duration of ∼9.4 Myr for the Aptian stage and an age of 122.6 ± 0.3 Ma for the base of the Aptian, consistent with radioisotope dating. We find a deviation in the periodicity of gMercury–gJupiter eccentricity term in the mid-Aptian stage, at ca. 117.19 ± 0.3 Ma, that we ascribe as an expression of the resonance transition σ = (gMercury – gJupiter) – (sMercury – sVenus), in relation with a strong chaotic orbital motion of Mercury. Such a geological observation is supported by a concomitant resonant transition in the La2004 astronomical model.

Potential effects of shoaling of oxygen minimum zone on the population of Acartia (Acanthacartia) tonsa in the Humboldt Current Upwelling System (23°S)

Expansion and shoaling of the Oxygen Minimum Zone (OMZ) in coastal upwelling systems due to climate change can have dire consequences on the ecosystem structure and productivity. The OMZ restricts the habitat range of most zooplankton, and species with low tolerance to hypoxia may suffer physiological stress and mortality as a result. During 2013 and 2014, the copepod Acartia tonsa collected off northern Chile was used to evaluate how hypoxia may affect its survival and vital rates. Exposure of gravid females to severe hypoxia (∼0.2 mL L−1 dissolved oxygen) resulted in total mortality. Hypoxia at ∼0.5 mL L−1 decreased female survival to ∼20% and egg production to nil. Hypoxia at ∼0.8 mL L−1 decreased survival to ∼50% but no change in egg production rate compared to the normoxia treatment. Egg hatching success was ∼68% and naupliar development time was ∼36% lower in hypoxia than normoxia. The critical and lethal oxygen levels for the species were estimated to be 1.78 and 0.73 mL L−1, respectively. Based on modeled historical data, the 1.5 mL L−1 isopleth has been moving upward at a rate of 1.3–2.0 m per year in northern Chile, barring interruptions during El Niño events. The long-term, gradual shoaling of the OMZ is expected to have significant impacts on the zooplankton community and productivity in the region.

Microbial and Viral Genome and Proteome Nitrogen Demand Varies across Multiple Spatial Scales within a Marine Oxygen Minimum Zone.

Nutrient availability can significantly influence microbial genomic and proteomic streamlining, for example, by selecting for lower nitrogen to carbon ratios. Oligotrophic open ocean microbes have streamlined genomic nitrogen requirements relative to those of their counterparts in nutrient-rich coastal waters. However, steep gradients in nutrient availability occur at meter-level, and even micron-level, spatial scales. It is unclear whether such gradients also structure genomic and proteomic stoichiometry. Focusing on the eastern tropical North Pacific oxygen minimum zone (OMZ), we use comparative metagenomics to examine how nitrogen availability shapes microbial and viral genome properties along the vertical gradient across the OMZ and between two size fractions, distinguishing free-living microbes versus particle-associated microbes. We find a substantial increase in the nitrogen content of encoded proteins in particle-associated over free-living bacteria and archaea across nitrogen availability regimes over depth. Within each size fraction, we find that bacterial and viral genomic nitrogen tends to increase with increasing nitrate concentrations with depth. In contrast to cellular genes, the nitrogen content of virus proteins does not differ between size fractions. We identified arginine as a key amino acid in the modulation of the C:N ratios of core genes for bacteria, archaea, and viruses. Functional analysis reveals that particle-associated bacterial metagenomes are enriched for genes that are involved in arginine metabolism and organic nitrogen compound catabolism. Our results are consistent with nitrogen streamlining in both cellular and viral genomes on spatial scales of meters to microns. These effects are similar in magnitude to those previously reported across scales of thousands of kilometers. IMPORTANCE The genomes of marine microbes can be shaped by nutrient cycles, with ocean-scale gradients in nitrogen availability being known to influence microbial amino acid usage. It is unclear, however, how genomic properties are shaped by nutrient changes over much smaller spatial scales, for example, along the vertical transition into oxygen minimum zones (OMZs) or from the exterior to the interior of detrital particles. Here, we measure protein nitrogen usage by marine bacteria, archaea, and viruses by using metagenomes from the nitracline of the eastern tropical North Pacific OMZ, including both particle-associated and nonassociated biomass. Our results show higher genomic and proteomic nitrogen content in particle-associated microbes and at depths with higher nitrogen availability for cellular and viral genomes. This discovery suggests that stoichiometry influences microbial and viral evolution across multiple scales, including the micrometer to millimeter scale associated with particle-associated versus free-living lifestyles.

Palaeobiogeography, palaeoecology, and sequence stratigraphy of the Upper Jurassic carbonate succession of the Lar Formation, central Alborz Zone, Iran

Foraminifera, ammonites, and calcareous dinoflagellates were used for stratigraphy and, together with microfacies, for the assessment of the palaeoenvironmental conditions of the Upper Jurassic deposits in the central Alborz Zone of northern Iran. The Lar Formation (Lar Fm.) in the Polur section is of latest Oxfordian to early Kimmeridgian age. The ammonite Subnebrodites planula and the calcareous dinoflagellate Colomisphaera nagyi have been introduced as new biomarkers of the lower Kimmeridgian in the central Neo-Tethys. The distribution of calcareous dinoflagellates reflects possible dispersal routes along a narrow seaway between the western Neo-Tethys and the Alborz Zone in the central Neo-Tethys. The Terebella-Crescentiella associations of the Lar Fm. represent a low-energy setting under dysoxic conditions in the Central Neo-Tethys Ocean. The benthic foraminiferal assemblages in this formation show a high dominance of infaunal taxa and r-selected strategists. This assemblage is reminiscent of eutrophic conditions and low oxygen levels in the lower part of the Lar Fm. Good preservation of the hexactinellid sponges in the upper part of the Lar Fm. also indicates an oxygen-minimum zone. Three third-order depositional sequences can be distinguished in the study area based on six microfacies. Depositional sequence 1 (DS1) is composed mainly of argillaceous limestone and medium- to thick-bedded limestone, corresponding to an outer ramp-to-middle ramp environment. Depositional sequence 2 (DS2) comprises breccia limestone and thick-bedded limestone facies in its lower part and thin-bedded limestone to massive limestone in its upper part. The breccia limestone facies may be associated with subaerial exposure and reworking of previously deposited sediment during a relative sea level fall. The thin-bedded limestone to massive limestone of DS2 consists mainly of bioclastic mudstone to wackestone (outer ramp). These represent an deep-water outer homoclinal ramp facies. Depositional sequence 3 (DS3) consists mainly of massive limestone to thick-bedded limestone with a bioclastic peloidal microbial Crescentiella packstone (middle ramp). The relative stratigraphic positions of DSs1–3 and sequence boundaries in the uppermost Oxfordian to lower Kimmeridgian of the Polur area show a fair match to the upper Oxfordian to lower Kimmeridgian sequences (JOx7, JOx8, JKi1 and JKi2) on the global sea level curve.

Prokaryotic community dynamics and nitrogen-cycling genes in an oxygen-deficient upwelling system during La Niña and El Niño conditions.

Dissolved oxygen regulates microbial distribution and nitrogen cycling and, therefore, ocean productivity and Earth's climate. To date, the assembly of microbial communities in relation to oceanographic changes due to El Niño Southern Oscillation (ENSO) remains poorly understood in oxygen minimum zones (OMZ). The Mexican Pacific upwelling system supports high productivity and a permanent OMZ. Here, the spatiotemporal distribution of the prokaryotic community and nitrogen-cycling genes was investigated along a repeated transect subjected to varying oceanographic conditions associated with La Niña in 2018 and El Niño in 2019. The community was more diverse during La Niña and in the aphotic OMZ, dominated by the Subtropical Subsurface water mass, where the highest abundances of nitrogen-cycling genes were found. The largest proportion of the Gulf of California water mass during El Niño provided warmer, more oxygenated, and nutrient-poor waters towards the coast, leading to a significant increase of Synechococcus in the euphotic layer compared with the opposite conditions during La Niña. These findings suggest that prokaryotic assemblages and nitrogen genes are linked to local physicochemical conditions (e.g. light, oxygen, nutrients), but also to oceanographic fluctuations associated with ENSO phases, indicating the crucial role of climate variability in microbial community dynamics in this OMZ.

Zooplankton community succession and trophic links during a mesocosm experiment in the coastal upwelling off Callao Bay (Peru)

Abstract. The Humboldt Current Upwelling System (HCS) is the most productive eastern boundary upwelling system (EBUS) in terms of fishery yield on the planet. EBUSs are considered hotspots of climate change with predicted expansion of mesopelagic oxygen minimum zones (OMZs) and related changes in the frequency and intensity of upwelling of nutrient-rich, low-oxygen deep water. To increase our mechanistic understanding of how upwelling impacts plankton communities and trophic links, we investigated mesozooplankton community succession and gut fluorescence, fatty acid and elemental compositions (C, N, O, P), and stable isotope (δ13C, δ15N) ratios of dominant mesozooplankton and microzooplankton representatives in a mesocosm setup off Callao (Peru) after simulated upwelling with OMZ water from two different locations and different N:P signatures (moderate and extreme treatments). An oxycline between 5 and 15 m with hypoxic conditions (<50 µmol L−1) below ∼10 m persisted in the mesocosms throughout the experiment. No treatment effects were determined for the measured parameters, but differences in nutrient concentrations established through OMZ water additions were only minor. Copepods and polychaete larvae dominated in terms of abundance and biomass. Development and reproduction of the dominant copepod genera Paracalanus sp., Hemicyclops sp., Acartia sp., and Oncaea sp. were hindered as evident from accumulation of adult copepodids but largely missing nauplii. Failed hatching of nauplii in the hypoxic bottom layer of the mesocosms and poor nutritional condition of copepods suggested from very low gut fluorescence and fatty acid compositions most likely explain the retarded copepod development. Correlation analysis revealed no particular trophic relations between dominant copepods and phytoplankton groups. Possibly, particulate organic matter with a relatively high C:N ratio was a major diet of copepods. C:N ratios of copepods and polychaetes ranged 4.8–5.8 and 4.2–4.3, respectively. δ15N was comparatively high (∼13 ‰–17 ‰), potentially because the injected OMZ source water was enriched in δ15N as a result of anoxic conditions. Elemental ratios of dinoflagellates deviated strongly from the Redfield ratio. We conclude that opportunistic feeding of copepods may have played an important role in the pelagic food web. Overall, projected changes in the frequency and intensity of upwelling hypoxic waters may make a huge difference for copepod reproduction and may be further enhanced by varying N:P ratios of upwelled OMZ water masses.

Redox conditions and ecological resilience during Oceanic Anoxic Event 2 in the Western Interior Seaway

Oceanic Anoxic Events (OAEs) are important geological events that may be analogues to future climate-driven deoxygenation of our oceans. Much of the global ocean experienced anoxic conditions during the Cenomanian–Turonian OAE (OAE2; ∼94 Ma), whereas the Western Interior Seaway (WIS) experienced oxygenation at this time. Here, organic geochemical and palynological data generated from Cenomanian–Turonian age sediments from five sites in the WIS are used to investigate changing redox and ecological conditions across differing palaeoenvironments and palaeolatitudes. Heterogeneity across the sites is apparent, but important relationships and trends among oceanographic variables are recognised: 1) Increasing total organic carbon (TOC) and CaCO3 percentages indicate the onset of a sea-level maximum towards the end of OAE2; 2) C28 sterane is shown to be a useful marker for prasinophyte abundance, and concurrent increases in this marker and overall sterane abundance indicate prasinophyte-driven increase in algal productivity in a stratified water column; and 3) sterane ratios can be a more reliable geochemical proxy than redox proxies for assessing the Benthic Oxic Zone. Our redox data do not always follow established trends for the WIS overall, particularly for proximal settings. We therefore surmise that local effects, such as nutrient-driven expansion of the oxygen minimum zone and/or sedimentation-driven anoxia just below the sediment-water interface, have overprinted regional trends.

Revealing the Paleo-ocean Environment of OSM-XX in the Western Pacific Magellan Seamount with Mineralogical and Geochemical Properties of Ferromanganese Crust

AbstractVariations in geochemical and mineralogical properties of the ferromanganese(Fe-Mn) crust reflect environmental changes. In the present study, geochemical and mineralogical analyses, including micro X-ray fluorescence and X-ray diffraction, were utilized to reconstruct the paleo-ocean environment of western Pacific Magellan seamount cluster. Samples of the Fe-Mn crust were collected using an epibenthic sledge from the open seamount XX (151° 51.12′ 7.2″ E and 16° 8.16′ 9.6″ N, 1557 meters below sea level) in the Western Pacific Magellan Seamount. According to the structure and phosphating status, the Fe-Mn crust of the OSM-XX can be divided into the following: phosphatizated (L4-L5), massive non-phosphatizated (L3), and porous non-phosphatizated (L1-L2) portions. All ferromanganese layers contain vernadite, and owing to the presence of carbonate fluorapatite (CFA), the phosphatizated portion (L4-L5) is rich in Ca and P. The massive non-phosphatizated section (L3) contains high Mn, Ni, and Co, whereas the porous non-phosphatizated portion (L1-L2), which comprises detrital quartz and feldspar, is rich in Fe. Variations in properties of the Fe-Mn crust from the OSM-XX reflect changes in the nearby marine environment. The formation of this crust started at approximately 51.87 Ma, and precipitation of the CFA during the global phosphatization event that occurred at approximately 36–32 Ma highlights an elevated sea level and low temperature during the associated period. The high Mn, Ni, and Co concentrations and elevated Mn/Fe ratios of samples from the massive phosphatizated portion indicate that the oxygen minimum zone (OMZ) was enhanced, and reducing conditions prevailed during the crust formation. The high Fe and low Mn/Fe ratios in the porous portion indicate a weak OMZ and dominantly oxidizing conditions. These data reflect environmental changes following the end of the Mi-1 glacial period in the Miocene-Oligocene boundary. Subsequently, Mn/Fe and Co/Mn ratios increased slightly in the outermost part of Fe-Mn crust because of the enhanced bottom current and OMZ associated with the continued cooling from approximately 9 Ma. However, the reduced carbonate dissolution rate in the Pacific Ocean from approximately 6 Ma decreased the growth rate of the Fe-Mn crust.망간각의 지화학적, 광물학적 특성의 변화는 인근 환경 변화를 반영한다. 따라서 서태평양 마젤란해산군 OSM-XX의 망간각에 대한 특성 파악과 고해양 복원 연구를 위하여 지화학적, 광물학적 분석을 각각 micro X-ray fluorescence (μ-XRF) 과 X-ray diffraction (XRD)를 이용하여 실시하였다. OSM-XX의 망간각은 인산염화 여부 및 구조에 의해 인산염화 작용을 받은 부분(L4-L5), 인산염화 작용을 받지 않은 치밀한 부분(L3), 인산염화 작용을 받지 않은 다공성 부분(L1-L2)의 세 부분으로 구분되었다. 철망간 산화광물 층에서는 모두 버나다이트 피크가 확인되었으며, 인산염화 작용을 받은 부분은 carbonate fluorapatite(CFA)의 존재와 높은 Ca, P의 특성을 나타내었다. 인산염화 작용을 받지 않은 치밀한 부분은 높은 Mn, Ni, Co를 나타내었고, 인산염화작용을 받지 않은 다공성 부분은 높은 Fe값과 detritus quartz, feldspar가 확인되었다. OSM-XX의 망간각이 성장하는동안 나타난 특성의 변화는 인근 해양환경의 변화를 반영하였다. 약 51.87 Ma의 연대를 나타내는 망간각의 인산염 퇴적체는 약 36-32 Ma의 전지구적 인산염화 작용에 의해 형성된 것으로 보이며, 이는 당시의 상승된 해수면 높이와 낮은 해수온을 지시한다. 또한, 치밀한 구조에서의 높은 Mn, Ni, Co, Mn/Fe 비는 강화된 산소최소층과 환원환경을 지시하며, 다공성 구조에서의 높은 Fe와 낮은 Mn/Fe 비는 약화된 산소최소층과 산화환경을 지시한다. 이는 마이오세-올리고세 경계의 Mi-1 빙하기가 끝난 후 환경변화를 반영하였다. 9 Ma부터 이어진 한랭화의 결과로 인한 저층류와 산소최소층의 강화에 의해 망간각 최외각의 Mn/Fe 비와 Co/Mn 비가 미세하게 증가하였지만, 6 Ma부터 태평양에 발생한 탄산염 용해율의 감소로 성장속도의 감소를 야기하였다.Keywords : ferromanganese crust, paleo-oceanography, redox condition, paleo productivity, western Pacific Magellan seamount

Three stages in the variation of the depth of hypoxia in the California Current System 2003–2020 by satellite estimation

The depth of hypoxia (DOH) is the shallowest depth at which the waters become hypoxic (oxygen concentration < 60 μmol kg−1), is a crucial indicator of the formation and expansion of oxygen minimum zones (OMZs). In this study, a nonlinear polynomial regression inversion model was developed to estimate the DOH in the California Current System (CCS), based on the dissolved oxygen profile detected by the Biogeochemical-Argo (BGC-Argo) float and remote sensing data. Satellite-derived net community production was used in the algorithm development, to denote the combined effect of phytoplankton photosynthesis and O2 consumption. Our model performs well, with a coefficient of determination of 0.82 and a root mean square error of 37.69 m (n = 80) from November 2012 to August 2016. Then, it was used to reconstruct the variation in satellite-derived DOH in the CCS from 2003 to 2020, and three stages of the DOH variation trend were identified. From 2003 to 2013, the DOH showed a significant shallowing trend due to the intense subsurface O2 consumption caused by strong phytoplankton production in the CCS coastal region. The trend was interrupted by two successive strong climate oscillation events from 2014 to 2016, which led to a significant deepening of the DOH and a slowing, or even reversal, of the variations in other environmental parameters. After 2017, the effects of climate oscillation events gradually disappeared, and the shallowing pattern in the DOH recovered slightly. However, by 2020, the DOH had not returned to the pre-2014 shallowing characteristic, which would lead to continuing complex ecosystem responses in the context of global warming. Based on the satellite inversion model of DOH in the CCS, we provide a new insight on the high-resolution spatiotemporal OMZ variations during an 18-year period in the CCS, which will aid in the evaluation and prediction of local ecosystems variation.

Carbon dioxide removal via macroalgae open-ocean mariculture and sinking: an Earth system modeling study

Abstract. In this study, we investigate the maximum physical and biogeochemical potential of macroalgae open-ocean mariculture and sinking (MOS) as an ocean-based carbon dioxide removal (CDR) method. Embedding a macroalgae model into an Earth system model, we simulate macroalgae mariculture in the open-ocean surface layer followed by fast sinking of the carbon-rich macroalgal biomass to the deep seafloor (depth&gt;3000 m), which assumes no remineralization of the harvested biomass during the quick sinking. We also test the combination of MOS with artificial upwelling (AU), which fertilizes the macroalgae by pumping nutrient-rich deeper water to the surface. The simulations are done under RCP 4.5, a moderate-emissions pathway. When deployed globally between years 2020 and 2100, the carbon captured and exported by MOS is 270 PgC, which is further boosted by AU of 447 PgC. Because of feedbacks in the Earth system, the oceanic carbon inventory only increases by 171.8 PgC (283.9 PgC with AU) in the idealized simulations. More than half of this carbon remains in the ocean after cessation at year 2100 until year 3000. The major side effect of MOS on pelagic ecosystems is the reduction of phytoplankton net primary production (PNPP) due to the competition for nutrients with macroalgae and due to canopy shading. MOS shrinks the mid-layer oxygen-minimum zones (OMZs) by reducing the organic matter export to, and remineralization in, subsurface and intermediate waters, while it creates new OMZs on the seafloor by oxygen consumption from remineralization of sunken biomass. MOS also impacts the global carbon cycle by reducing the atmospheric and terrestrial carbon reservoirs when enhancing the ocean carbon reservoir. MOS also enriches dissolved inorganic carbon in the deep ocean. Effects are mostly reversible after cessation of MOS, though recovery is not complete by year 3000. In a sensitivity experiment without remineralization of sunken MOS biomass, the whole of the MOS-captured carbon is permanently stored in the ocean, but the lack of remineralized nutrients causes a long-term nutrient decline in the surface layers and thus reduces PNPP. Our results suggest that MOS has, theoretically, considerable CDR potential as an ocean-based CDR method. However, our simulations also suggest that such large-scale deployment of MOS would have substantial side effects on marine ecosystems and biogeochemistry, up to a reorganization of food webs over large parts of the ocean.

Review on the physical chemistry of iodine transformations in the oceans

The transformation between iodate (IO3−), the thermodynamically stable form of iodine, and iodide (I-), the kinetically stable form of iodine, has received much attention because these species are often dependent on the oxygen concentration, which ranges from saturation to non-detectable in the ocean. As suboxic conditions in the ocean’s major oxygen minimum zones indicate that IO3− is minimal or non-detectable, the incorporation of IO3− into carbonate minerals has been used as a redox proxy to determine the O2 state of the ocean. Here, I look at the one and two electron transfers between iodine species with a variety of oxidants and reductants to show thermodynamics of these transformations. The IO3− to IO2− conversion is shown to be the controlling step in the reduction reaction sequence due to thermodynamic considerations. As IO3− reduction to IO2− is more favorable than NO3− reduction to NO2− at oceanic pH values, there is no need for nitrate reductase for IO3− reduction as other reductants (e.g. Fe2+, Mn2+) and dissimilatory IO3− reduction by microbes during organic matter decomposition can affect the transformation. Unfortunately, there is a dearth of information on the kinetics of reductants with IO3−; thus, the thermodynamic calculations suggest avenues for research. Conversely, there is significant information on the kinetics of I- oxidation with various oxygen species. In the environment, I- oxidation is the controlling step for oxidation. The oxidants that can lead to IO3− are reactive oxygen species with O3 and •OH being the most potent as well as sedimentary oxidized Mn, which occurs at lower pH than ocean waters. Recent work has shown that iodide oxidizing bacteria can also form IO3−. I- oxidation is more facile at the sea surface microlayer and in the atmosphere due to O3.

Nitrogen cycling activities during decreased stratification in the coastal oxygen minimum zone off Namibia.

Productive oxygen minimum zones are regions dominated by heterotrophic denitrification fueled by sinking organic matter. Microbial redox-sensitive transformations therein result in the loss and overall geochemical deficit in inorganic fixed nitrogen in the water column, thereby impacting global climate in terms of nutrient equilibrium and greenhouse gases. Here, geochemical data are combined with metagenomes, metatranscriptomes, and stable-isotope probing incubations from the water column and subseafloor of the Benguela upwelling system. The taxonomic composition of 16S rRNA genes and relative expression of functional marker genes are used to explore metabolic activities by nitrifiers and denitrifiers under decreased stratification and increased lateral ventilation in Namibian coastal waters. Active planktonic nitrifiers were affiliated with Candidatus Nitrosopumilus and Candidatus Nitrosopelagicus among Archaea, and Nitrospina, Nitrosomonas, Nitrosococcus, and Nitrospira among Bacteria. Concurrent evidence from taxonomic and functional marker genes shows that populations of Nitrososphaeria and Nitrospinota were highly active under dysoxic conditions, coupling ammonia and nitrite oxidation with respiratory nitrite reduction, but minor metabolic activity toward mixotrophic use of simple nitrogen compounds. Although active reduction of nitric oxide to nitrous oxide by Nitrospirota, Gammaproteobacteria, and Desulfobacterota was tractable in bottom waters, the produced nitrous oxide was apparently scavenged at the ocean surface by Bacteroidota. Planctomycetota involved in anaerobic ammonia oxidation were identified in dysoxic waters and their underlying sediments, but were not found to be metabolically active due to limited availability of nitrite. Consistent with water column geochemical profiles, metatranscriptomic data demonstrate that nitrifier denitrification is fueled by fixed and organic nitrogen dissolved in dysoxic waters, and prevails over canonical denitrification and anaerobic oxidation of ammonia when the Namibian coastal waters and sediment-water interface on the shelf are ventilated by lateral currents during austral winter.

High‐Resolution, Basin‐Scale Simulations Reveal the Impact of Intermediate Zonal Jets on the Atlantic Oxygen Minimum Zones

AbstractEastward zonal jets at intermediate depths of 300–800 m connect the oxygen‐rich western boundary of the Atlantic basin with the oxygen minimum zones (OMZs) on the eastern boundary. They are not well represented in climate models because the low horizontal resolution of these models yields excessive viscosity. We use two physical‐biogeochemical model configurations of the Tropical Atlantic to show that the increase in resolution results in more robust intermediate zonal jets and a better representation of the OMZs. The OMZ structure is distorted at low‐resolution as surface, westward jets advect low‐oxygen waters from the eastern boundary much further west than in the climatology. The emergence of robust eastward jets in the high‐resolution run alleviate this problem and reproduce the Atlantic OMZs more accurately. The asymmetry between westward and eastward jets occurs because the former are associated with homogenous potential vorticity regions originating in the eastern boundary while the latter are associated with potential vorticity gradients. Intermediate, eastward jets constrain the westward expansion of the OMZs by supplying oxygen to their western edge. Within the OMZs, higher resolution allows a better representation of the boundary current system and eddying processes at depth which redistribute of low oxygen values from the productive eastern boundary. Basin‐scale, high‐resolution simulations reproduce more accurately the transfer of energy across scales that results in robust zonal jets as well as their impact on the ocean biogeochemistry. Accurate model predictions provide a pathway to disentangle natural and anthropogenic causes of ocean deoxygenation.