Remineralization Of Organic Matter Research Articles

Cape Verde Frontal Zone in summer 2017: lateral transports of mass, dissolved oxygen and inorganic nutrients

Abstract. The circulation patterns in the confluence of the North Atlantic subtropical and tropical gyres delimited by the Cape Verde Front (CVF) were examined during a field cruise in summer 2017. We collected hydrographic data, dissolved oxygen (O2) and inorganic nutrients along the perimeter of a closed box embracing the Cape Verde Frontal Zone (CVFZ). The detailed spatial (horizontal and vertical) distribution of water masses, O2 and inorganic nutrients in the CVF was analyzed, allowing for the independent estimation of the transports of these properties in the subtropical and tropical domains down to 2000 m. Overall, at surface and central levels, a net westward transport of 3.76 Sv was observed, whereas at intermediate levels, a net 3 Sv transport northward was obtained. We observed O2 and inorganic nutrient imbalances in the domain consistent with O2 consumption and inorganic nutrient production by organic matter remineralization, resulting in a net transport of inorganic nutrients to the ocean interior by the circulation patterns.

Evaluating the physical and biogeochemical state of the global ocean component of UKESM1 in CMIP6 historical simulations

Abstract. The ocean plays a key role in modulating the climate of the Earth system (ES). At the present time it is also a major sink both for the carbon dioxide (CO2) released by human activities and for the excess heat driven by the resulting atmospheric greenhouse effect. Understanding the ocean's role in these processes is critical for model projections of future change and its potential impacts on human societies. A necessary first step in assessing the credibility of such future projections is an evaluation of their performance against the present state of the ocean. Here we use a range of observational fields to validate the physical and biogeochemical performance of the ocean component of UKESM1, a new Earth system model (ESM) for CMIP6 built upon the HadGEM3-GC3.1 physical climate model. Analysis focuses on the realism of the ocean's physical state and circulation, its key elemental cycles, and its marine productivity. UKESM1 generally performs well across a broad spectrum of properties, but it exhibits a number of notable biases. Physically, these include a global warm bias inherited from model spin-up, excess northern sea ice but insufficient southern sea ice and sluggish interior circulation. Biogeochemical biases found include shallow remineralization of sinking organic matter, excessive iron stress in regions such as the equatorial Pacific, and generally lower surface alkalinity that results in decreased surface and interior dissolved inorganic carbon (DIC) concentrations. The mechanisms driving these biases are explored to identify consequences for the behaviour of UKESM1 under future climate change scenarios and avenues for model improvement. Finally, across key biogeochemical properties, UKESM1 improves in performance relative to its CMIP5 precursor and performs well alongside its fellow members of the CMIP6 ensemble.

Biogenic carbonate fluxes and preservation in the northwestern Labrador Sea since the Last Glacial Maximum

The important changes that took place in the glacial cycle at the termination, from the Last Glacial Maximum to the present interglacial, deserve an examination of ocean sedimentary records that document past productivity, carbon fluxes, and carbonate preservation. In this study, we analyzed coccoliths, alkenones, and foraminifers in core HU2008–029-004 PC (61.46°N and 58.04°W, water depth = 2,674 m) from the northwestern Labrador Sea to document linkages between hydrographic conditions, biogenic carbonate fluxes to the seafloor, and their preservation/dissolution during the last 25,000 years. Large changes in coccolith and foraminifer concentrations are recorded, with sediments from the last glacial interval containing significantly less carbonate microfossils (9.5 ± 3.9 × 105 coccoliths g−1 and 2,860 ± 580 planktonic foraminifers g−1) than sediments from the deglacial and postglacial intervals (up to 3.1 × 108 coccoliths g−1 and 2.9 × 104 foraminifers g−1). Three foraminifer-based calcite dissolution indices were used to evaluate biogenic carbonate preservation: the planktonic foraminifer fragmentation index, the ratio of benthic-to-planktonic foraminifers (B/P), and the ratio of organic linings to benthic foraminifers (OL/B). Fragmentation remained low throughout the postglacial (mean of 4%) but reached up to 8% in the deglacial and peaked at 16% in samples from the Bølling-Allerød of the late glacial interval. Samples from the Bølling-Allerød and the deglacial interval also display a slightly elevated B/P index (>0.15), which suggests that some dissolution may have occurred. In contrast, with the exception of the Bølling-Allerød and the deglacial interval, near zero OL/B values characterize most of the sequence, suggesting good biogenic carbonate preservation, which implies that the low biogenic carbonate and coccolith content in sediments of the glacial stage mirror low productivity of calcifying organisms. The elevated fragmentation of foraminifers during the Bølling-Allerød and the deglacial interval, a time of elevated productivity and low percentages of ice-rafted debris, may indicate the development of calcite undersaturated porewaters and consequent dissolution resulting from oxic remineralization of sedimentary organic matter. We also identify a significant decoupling of coccolith and alkenone concentrations throughout the core. Colder-than-expected UK37-SST estimates from the alkenones of the glacial interval rule out possible allochthonous inputs from lower-latitude locations. Instead, our records imply that at least during the glacial interval, alkenones were produced by non-calcifying haptophytes that may not follow the canonical UK37-based temperature calibrations.

Macroalgae degradation promotes microbial iron reduction via electron shuttling in coastal Antarctic sediments.

Colonization of newly ice-free areas by marine benthic organisms intensifies burial of macroalgae detritus in Potter Cove coastal surface sediments (Western Antarctic Peninsula). Thus, fresh and labile macroalgal detritus serves as primary organic matter (OM) source for microbial degradation. Here, we investigated the effects on post-depositional microbial iron reduction in Potter Cove using sediment incubations amended with pulverized macroalgal detritus as OM source, acetate as primary product of OM degradation and lepidocrocite as reactive iron oxide to mimic in situ conditions. Humic substances analogue anthraquinone-2,6-disulfonic acid (AQDS) was also added to some treatments to simulate potential for electron shuttling. Microbial iron reduction was promoted by macroalgae and further enhanced by up to 30-folds with AQDS. Notably, while acetate amendment alone did not stimulate iron reduction, adding macroalgae alone did. Acetate, formate, lactate, butyrate and propionate were detected as fermentation products from macroalgae degradation. By combining 16S rRNA gene sequencing and RNA stable isotope probing, we reconstructed the potential microbial food chain from macroalgae degraders to iron reducers. Psychromonas, Marinifilum, Moritella, and Colwellia were detected as potential fermenters of macroalgae and fermentation products such as lactate. Members of class deltaproteobacteria including Sva1033, Desulfuromonas, and Desulfuromusa together with Arcobacter (former phylum Epsilonbacteraeota, now Campylobacterota) acted as dissimilatory iron reducers. Our findings demonstrate that increasing burial of macroalgal detritus in an Antarctic fjord affected by glacier retreat intensifies early diagenetic processes such as iron reduction. Under scenarios of global warming, the active microbial populations identified above will expand their environmental function, facilitate OM remineralisation, and contribute to an increased release of iron and CO2 from sediments. Such indirect consequences of glacial retreat are often overlooked but might, on a regional scale, be relevant for the assessment of future nutrient and carbon fluxes.

Sediment reworking by the burrowing polychaete Hediste diversicolor modulated by environmental and biological factors across the temperate North Atlantic. A tribute to Gaston Desrosiers

Particle mixing and irrigation of the seabed by benthic fauna (bioturbation) have major impacts on ecosystem functions such as remineralization of organic matter and sediment-water exchange. As a tribute to Prof. Gaston Desrosiers by the Nereis Park association, eighteen laboratories carried out a collaborative experiment to acquire a global snapshot of particle reworking by the polychaete Hediste diversicolor at 16 sites surrounding the Northern Atlantic. Organisms and soft sediments were collected during May – July at different geographical locations and, using a common laboratory protocol, particulate fluorescent tracers (‘luminophores’) were used to quantify particle transport over a 10-day period. Particle mixing was quantified using the maximum penetration depth of tracers (MPD), particle diffusive coefficients (Db), and non-local transport coefficients (r). Non-local coefficients (reflecting centimeter scale transport steps) ranged from 0.4 to 15 yr−1, and were not correlated across sites with any measured biological (biomass, biovolume) or environmental parameters (temperature, grain size, organic matter). Maximum penetration depths (MPD) averaged ~10.7 cm (6.5–14.5 cm), and were similar to the global average bioturbation depth inferred from short-lived radiochemical tracers. MPD was also not correlated with measures of size (individual biomass), but increased with grain size and decreased with temperature. Biodiffusion (Db) correlated inversely with individual biomass (size) and directly with temperature over the environmental range (Q10 ~ 1.7; 5–21 °C). The transport data were comparable in magnitude to rates reported for localized H. diversicolor populations of similar size, and confirmed some but not all correlations between sediment reworking and biological and environmental variables found in previous studies. The results imply that measures of particle reworking activities of a species from a single location can be generally extrapolated to different populations at similar conditions.

Feedback Between Carbon and Nitrogen Cycles During the Ediacaran Shuram Excursion

The middle Ediacaran Period records one of the deepest negative carbonate carbon isotope (δ13Ccarb) excursions in Earth history (termed the Shuram excursion). This excursion is argued by many to represent a large perturbation of the global carbon cycle. If true, this event may also have induced significant changes in the nitrogen cycle, because carbon and nitrogen are intimately coupled in the global ocean. However, the response of the nitrogen cycle to the Shuram excursion remains ambiguous. Here, we reported high resolution bulk nitrogen isotope (δ15N) and organic carbon isotope (δ13Corg) data from the upper Doushantuo Formation in two well-preserved sections (Jiulongwan and Xiangerwan) in South China. The Shuram-equivalent excursion is well developed in both localities, and our results show a synchronous decrease in δ15N across the event. This observation is further supported by bootstrapping simulations taking into account all published δ15N data from the Doushantuo Formation. Isotopic mass balance calculations suggest that the decrease in δ15N during the Shuram excursion is best explained by the reduction of isotopic fractionation associated with water column denitrification (εwd) in response to feedbacks between carbon and nitrogen cycling, which were modulated by changes in primary productivity and recycled nutrient elements through remineralization of organic matter. The study presented here thus offers a new perspective for coupled variations in carbon and nitrogen cycles and sheds new light on this critical time in Earth history.

DOM degradation by light and microbes along the Yukon River-coastal ocean continuum

The Arctic is experiencing rapid warming, resulting in fundamental shifts in hydrologic connectivity and carbon cycling. Dissolved organic matter (DOM) is a significant component of the Arctic and global carbon cycle, and significant perturbations to DOM cycling are expected with Arctic warming. The impact of photochemical and microbial degradation, and their interactive effects, on DOM composition and remineralization have been documented in Arctic soils and rivers. However, the role of microbes, sunlight and their interactions on Arctic DOM alteration and remineralization in the coastal ocean has not been considered, particularly during the spring freshet when DOM loads are high, photoexposure can be quite limited and residence time within river networks is low. Here, we collected DOM samples along a salinity gradient in the Yukon River delta, plume and coastal ocean during peak river discharge immediately after spring freshet and explored the role of UV exposure, microbial transformations and interactive effects on DOM quantity and composition. Our results show: (1) photochemical alteration of DOM significantly shifts processing pathways of terrestrial DOM, including increasing relative humification of DOM by microbes by > 10%; (2) microbes produce humic-like material that is not optically distinguishable from terrestrial humics; and (3) size-fractionation of the microbial community indicates a size-dependent role for DOM remineralization and humification of DOM observed through modeled PARAFAC components of fluorescent DOM, either through direct or community effects. Field observations indicate apparent conservative mixing along the salinity gradient; however, changing photochemical and microbial alteration of DOM with increasing salinity indicate changing DOM composition likely due to microbial activity. Finally, our findings show potential for rapid transformation of DOM in the coastal ocean from photochemical and microbial alteration, with microbes responsible for the majority of dissolved organic matter remineralization.

Deoxygenation dynamics on the western Nile deep-sea fan during sapropel S1 from seasonal to millennial timescales

Abstract. Ocean deoxygenation is a rising threat to marine ecosystems and food resources under present climate warming conditions. Organic-rich sapropel layers deposited in the Mediterranean Sea provide a natural laboratory to study the processes that have controlled changes in seawater oxygen levels in the recent geological past. Our study is based on three sediment cores spanning the last 10 000 years and located on a bathymetric transect offshore from the western distributaries of the Nile delta. These cores are partly to continuously laminated in the sections recording sapropel S1, which is indicative of bottom-water anoxia above the western Nile deep-sea fan. We used a combination of microfacies analyses and inorganic and organic geochemical measurements to reconstruct changes in oxygenation conditions at seasonal to millennial timescales. Millimetre-thick laminations are composed of detrital, biogenic and chemogenic sublayers reflecting seasonal successions of sedimentation. Dark layers reflect the deposition of summer floods and two types of light layers correspond to autumn plankton blooms and authigenic carbonates formed in the water column during spring–early summer, respectively. The isotopic signature of the authigenic carbonates suggests permanent anoxic to euxinic bottom waters resulting in high levels of anaerobic remineralization of organic matter and highlights their potential to reconstruct seawater chemistry at times when benthic fauna was absent. Ratios of major elements combined with biomarkers of terrestrial and marine organic matter and redox-sensitive compounds allow changes in terrigenous input, primary productivity and past deoxygenation dynamics on millennial timescales to be tracked. Rapid fluctuations of oxygenation conditions in the upper 700 m water depth occurred above the Nile deep-sea fan between 10 and 6.5 ka BP, while deeper cores recorded more stable anoxic conditions. Synchronous changes in terrigenous input, primary productivity and past oxygenation dynamics after 6.5 ka BP show that runoff-driven eutrophication played a central role in rapid oxygenation changes in the south-eastern Levantine Basin. These findings are further supported by other regional records and reveal time-transgressive changes in oxygenation state driven by rapid changes in primary productivity during a period of long-term deep-water stagnation.

MESMO 3: Flexible phytoplankton stoichiometry and refractory dissolved organic matter

Abstract. We describe the third version of Minnesota Earth System Model for Ocean biogeochemistry (MESMO 3), an Earth system model of intermediate complexity, with a dynamical ocean, dynamic–thermodynamic sea ice, and an energy–moisture-balanced atmosphere. A major feature of version 3 is the flexible C:N:P ratio for the three phytoplankton functional types represented in the model. The flexible stoichiometry is based on the power law formulation with environmental dependence on phosphate, nitrate, temperature, and light. Other new features include nitrogen fixation, water column denitrification, oxygen and temperature-dependent organic matter remineralization, and CaCO3 production based on the concept of the residual nitrate potential growth. In addition, we describe the semi-labile and refractory dissolved organic pools of C, N, P, and Fe that can be enabled in MESMO 3 as an optional feature. The refractory dissolved organic matter can be degraded by photodegradation at the surface and hydrothermal vent degradation at the bottom. These improvements provide a basis for using MESMO 3 in further investigations of the global marine carbon cycle to changes in the environmental conditions of the past, present, and future.

Algal blooms modulate organic matter remineralization in freshwater sediments: A new insight on priming effect

This study provides a novel insight into the degradation of sediment organic matter (SOM) regulated by algae-derived organic matter (AOM) based on priming effect. We tracked the dynamics of SOM mineralization products and pathways, together with priming effects (PE) using the compound-specific stable isotope (δ13C) technique following addition of low- and high-density algal debris in sediments. We found that algal debris increased the total carbon oxidation rate, and resulted in denitrification and methanogenesis-dominated SOM mineralization. While iron reduction and sulphate reduction played important roles in the early period of algal accumulation. Total carbon oxidation rate and anaerobic rates (Ranaerobic) were higher in the amended treatments compared with that in the control. Analysis indicated that algal debris had a positive PE on SOM mineralization, which caused an intensified mineralization in the initial phase with over 80% of dissolved inorganic carbon deriving from SOM degradation. Total carbon oxidation rate of SOM deduced from priming effect (RTCOR-PE) was similar to Ranaerobic, further indicating SOM mineralization was a critical source of the end products. These findings deviate the causal focus from the decomposition of AOM, and confirm the accumulation of AOM as the facilitator of SOM mineralization. Our study offers empirical evidences to advance the traditional view on the effect of AOM on SOM mineralization.

Heterogeneous CO<sub>2</sub> and CH<sub>4</sub> content of glacial meltwater from the Greenland Ice Sheet and implications for subglacial carbon processes

Abstract. Accelerated melting of the Greenland Ice Sheet has increased freshwater delivery to the Arctic Ocean and amplified the need to understand the impact of Greenland Ice Sheet meltwater on Arctic greenhouse gas budgets. We evaluate subglacial discharge from the Greenland Ice Sheet for carbon dioxide (CO2) and methane (CH4) concentrations and δ13C values and use geochemical models to evaluate subglacial CH4 and CO2 sources and sinks. We compare discharge from southwest (a sub-catchment of the Isunnguata Glacier, sub-Isunnguata, and the Russell Glacier) and southern Greenland (Kiattut Sermiat). Meltwater CH4 concentrations vary by orders of magnitude between sites and are saturated with respect to atmospheric concentrations at Kiattut Sermiat. In contrast, meltwaters from southwest sites are supersaturated, even though oxidation reduces CH4 concentrations by up to 50 % during periods of low discharge. CO2 concentrations range from supersaturated at sub-Isunnguata to undersaturated at Kiattut Sermiat. CO2 is consumed by mineral weathering throughout the melt season at all sites; however, differences in the magnitude of subglacial CO2 sources result in meltwaters that are either sources or sinks of atmospheric CO2. At the sub-Isunnguata site, the predominant source of CO2 is organic matter (OM) remineralization. However, multiple or heterogeneous subglacial CO2 sources maintain atmospheric CO2 concentrations at Russell but not at Kiattut Sermiat, where CO2 is undersaturated. These results highlight a previously unrecognized degree of heterogeneity in greenhouse gas dynamics under the Greenland Ice Sheet. Future work should constrain the extent and controls of heterogeneity to improve our understanding of the impact of Greenland Ice Sheet melt on Arctic greenhouse gas budgets, as well as the role of continental ice sheets in greenhouse gas variations over glacial–interglacial timescales.

Anthropogenic CO2 and ocean acidification in Argentine Basin Water Masses over almost five decades of observations.

The chemical conditions of the Argentine Basin (western South Atlantic Ocean) water masses are evaluated with measurements from eleven hydrographic cruises to detect and quantify anthropogenic and natural stressors in the ocean carbon system. The database covers almost half-century (1972-2019), a time-span where the mean annual atmospheric carbon dioxide concentration (CO2atm) increased from 325 to 408ppm of volume (ppm). This increase of atmospheric CO2 (83ppm, the 64% of the total anthropogenic signal in the atmosphere) leads to an increase in anthropogenic carbon (Cant) across all the water column and the consequent ocean acidification: a decrease in excess carbonate that is unequivocal in the upper (South Atlantic Central Water, SACW) and intermediate water masses (Sub Antarctic Mode Water, SAMW and Antarctic Intermediate Water, AAIW). For each additional ppm in CO2atm the water masses SACW, SAMW and AAIW lose excess carbonate at a rate of 0.39±0.04, 0.47±0.05 and 0.23±0.03μmol·kg-1·ppm-1 respectively. Modal and intermediate water masses in the Argentine Basin are very sensitive to carbon increases due low buffering capacity. The large rate of AAIW acidification is the synergic effect of carbon uptake combined with deoxygenation and increased remineralization of organic matter. If CO2 emissions follows the path of business-as-usual emissions (SSP 5.85), SACW would become undersaturated with respect to aragonite at the end of the century. The undersaturation in AAIW is virtually unavoidable.

Temperature controls carbon cycling and biological evolution in the ocean twilight zone.

Theory suggests that the ocean's biological carbon pump, the process by which organic matter is produced at the surface and transferred to the deep ocean, is sensitive to temperature because temperature controls photosynthesis and respiration rates. We applied a combined data-modeling approach to investigate carbon and nutrient recycling rates across the world ocean over the past 15 million years of global cooling. We found that the efficiency of the biological carbon pump increased with ocean cooling as the result of a temperature-dependent reduction in the rate of remineralization (degradation) of sinking organic matter. Increased food delivery at depth prompted the development of new deep-water niches, triggering deep plankton evolution and the expansion of the mesopelagic "twilight zone" ecosystem.

Mechanisms Controlling Climate Warming Impact on the Occurrence of Hypoxia in Chesapeake Bay

AbstractClimate change represents an increasing stressor on estuarine and coastal ecosystems. A series of simulations were run using the Integrated Compartment Water Quality Model to determine the magnitude of various mechanisms controlling the effect of climate warming on dissolved oxygen (DO) in the Chesapeake Bay. The results suggested that the average hypoxic volume in the summer would increase by 9% (410 Mm3) from 1995 to 2025 as air temperature increases by 1.06°C and water temperature by 0.9°C. The change in DO solubility contributes 55% of the total climate warming effect, biological rates 33%, and stratification 11%. The Rappahannock Shoal, a hydraulic control point, plays a major role in determining the effect of climate warming on DO in the Bay. Due to the abrupt change in bathymetry, the convergence between seaward‐moving freshwater and landward‐moving saltwater causes downwelling and enhanced vertical mixing which introduces surface water of higher temperature to the deep channel and accelerates organic matter remineralization and oxygen consumption in deep waters. Surface water DO concentrations will decrease under climate warming conditions due to lower DO solubility, reducing DO flux to the deep channel and contributing to hypoxia development. These findings provide critical information for future management decision making regarding the effects of climate warming on DO in Chesapeake Bay and other estuaries.

Effects of temperature on the behaviour and metabolism of an intertidal foraminifera and consequences for benthic ecosystem functioning

Heatwaves have increased in intensity, duration and frequency over the last decades due to climate change. Intertidal species, living in a highly variable environment, are likely to be exposed to such heatwaves since they can be emerged for more than 6 h during a tidal cycle. Little is known, however, on how temperature affects species traits (e.g. locomotion and behaviour) of slow-moving organisms such as benthic foraminifera (single-celled protists), which abound in marine sediments. Here, we examine how temperature influences motion-behaviour and metabolic traits of the dominant temperate foraminifera Haynesina germanica by exposing individuals to usual (6, 12, 18, 24, 30 °C) and extreme (high; i.e. 32, 34, 36 °C) temperature regimes. Our results show that individuals reduced their activity by up to 80% under high temperature regimes whereas they remained active under the temperatures they usually experience in the field. When exposed to a hyper-thermic stress (i.e. 36 °C), all individuals remained burrowed and the photosynthetic activity of their sequestered chloroplasts significantly decreased. Recovery experiments subsequently revealed that individuals initially exposed to a high thermal regime partially recovered when the hyper-thermic stress ceased. H. germanica contribution to surface sediment reworking substantially diminished from 10 mm3 indiv−1 day−1 (usual temperature) to 0 mm3 indiv−1 day−1 when individuals were exposed to high temperature regimes (i.e. above 32 °C). Given their role in sediment reworking and organic matter remineralisation, our results suggest that heatwaves may have profound long-lasting effects on the functioning of intertidal muddy ecosystems and some key biogeochemical cycles.

Anoxic chlorophyll maximum enhances local organic matter remineralization and nitrogen loss in Lake Tanganyika

In marine and freshwater oxygen-deficient zones, the remineralization of sinking organic matter from the photic zone is central to driving nitrogen loss. Deep blooms of photosynthetic bacteria, which form the suboxic/anoxic chlorophyll maximum (ACM), widespread in aquatic ecosystems, may also contribute to the local input of organic matter. Yet, the influence of the ACM on nitrogen and carbon cycling remains poorly understood. Using a suite of stable isotope tracer experiments, we examined the transformation of nitrogen and carbon under an ACM (comprising of Chlorobiaceae and Synechococcales) and a non-ACM scenario in the anoxic zone of Lake Tanganyika. We find that the ACM hosts a tight coupling of photo/litho-autotrophic and heterotrophic processes. In particular, the ACM was a hotspot of organic matter remineralization that controlled an important supply of ammonium driving a nitrification-anammox coupling, and thereby played a key role in regulating nitrogen loss in the oxygen-deficient zone.

Prevalence of obligate and facultative anaerobic bacteria in the mudbank along the southwest coast of India

Mudbanks along the southwest coast of India are exposed to upwelled hypoxic waters and higher concentrations of methane during summer–monsoon.We report the phylogenetic composition of obligate and facultative anaerobic bacteria isolated from Alappuzha mudbank and their abilities to adapt to hypoxia. The average anaerobic bacterial abundances in the water column and sediment were in the range of 1.5 × 10 3 to 2.0 × 10 5cfu ml −1 and 1.3 × 10 4 to 2.0 × 10 6cfu g −1 respectively. Most of the bacteria isolated from Alappuzha mudbank were facultative anaerobes and were represented by Proteobacteria (61 %), Firmicutes (21 %), Actinobacteria (8 %), and Bacteroidetes (4 %). These facultative anaerobes were able to alter their fatty acid profile in response to aerobic and anaerobic culture conditions. In short, the field observations and laboratory experiments showed the response of a bacterial community towards changing environmental conditions in a persistent mudbank along the southwest coast of India Further studies are ongoing to understand the cellular and molecular basis of these adaptations and the implications for organic matter remineralization.

Evidence That Microorganisms at the Animal-Water Interface Drive Sea Star Wasting Disease.

Sea star wasting (SSW) disease describes a condition affecting asteroids that resulted in significant Northeastern Pacific population decline following a mass mortality event in 2013. The etiology of SSW is unresolved. We hypothesized that SSW is a sequela of microbial organic matter remineralization near respiratory surfaces, one consequence of which may be limited O2 availability at the animal-water interface. Microbial assemblages inhabiting tissues and at the asteroid-water interface bore signatures of copiotroph proliferation before SSW onset, followed by the appearance of putatively facultative and strictly anaerobic taxa at the time of lesion genesis and as animals died. SSW lesions were induced in Pisaster ochraceus by enrichment with a variety of organic matter (OM) sources. These results together illustrate that depleted O2 conditions at the animal-water interface may be established by heterotrophic microbial activity in response to organic matter loading. SSW was also induced by modestly (∼39%) depleted O2 conditions in aquaria, suggesting that small perturbations in dissolved O2 may exacerbate the condition. SSW susceptibility between species was significantly and positively correlated with surface rugosity, a key determinant of diffusive boundary layer thickness. Tissues of SSW-affected individuals collected in 2013–2014 bore δ15N signatures reflecting anaerobic processes, which suggests that this phenomenon may have affected asteroids during mass mortality at the time. The impacts of enhanced microbial activity and subsequent O2 diffusion limitation may be more pronounced under higher temperatures due to lower O2 solubility, in more rugose asteroid species due to restricted hydrodynamic flow, and in larger specimens due to their lower surface area to volume ratios which affects diffusive respiratory potential.

Preformed Properties for Marine Organic Matter and Carbonate Mineral Cycling Quantification

AbstractWe estimate preformed ocean phosphate, nitrate, oxygen, silicate, and alkalinity by combining a reconstruction of ventilation pathways in the ocean interior with estimates of submixed layer properties. These new preformed property estimates are intended to aid biogeochemical cycling studies and validation of modeled preformed property distributions and are available online. Analyses of net property accumulations (observed minus preformed properties) indicate net remineralization ratios in the ocean interior of [1 P]: [14.1 ± 0.6 N]: [−141 ± 12 O2]: [95 ± 25 Si]: [89 ± 9 TA]. These ratios imply that the interior ocean stores 1,300 (±230) PgC through organic matter remineralization and 540 (±60) PgC through carbonate mineral dissolution and that apparent oxygen utilization can overestimate the interior ocean oxygen consumption by ~25%. Further, only 4 (±1%) and 46 (±5%) of the total alkalinity accumulated from carbonate mineral dissolution are found in seawater that is supersaturated with respect to the aragonite and calcite mineral forms of calcium carbonate, respectively. These small excess alkalinity inventories are due to smaller volumes of the supersaturated water masses and shorter ventilation timescales, as carbonate mineral dissolution rates appear nearly independent of depth and saturation state.

Geochemistry and molybdenum isotopes of the basal Datangpo Formation: Implications for ocean-redox conditions and organic matter accumulation during the Cryogenian interglaciation

The basal Datangpo Formation in South China deposited in the Cryogenian interglacial period has gained increasing interest with the well development of organic-rich black shale and its hosted manganese (Mn) deposits (Mn carbonate), which contain important clues to the paleoclimate and ocean redox of this critical interval in Earth's history. The depositional environment of Mn deposits is still uncertain, as suggested by different suites of redox-indicating parameters. In addition, the Mn deposits are notable for their enrichment in organic matter (OM), despite the fact that the diagenetic origin for the Mn deposits would result in large consumption of OM. To gain insight into these issues, we present the geochemical and molybdenum (Mo) isotopic data of black shale and Mn carbonate samples from a new section. The Datangpo Mn carbonates are characterized by low Mo content (mostly <3.2 ppm) and slightly light Mo isotopic composition (mostly from +0.07‰ to +0.52‰), suggesting that Mo, once adsorbed in Mn-oxide particles, was released in suboxic or anoxic (non-sulfidic) pore water due to Mn-oxide reduction and then diffused back into the water column. Hence the extremely light Mo isotopic signatures might be rarely preserved in sediments. The Mn carbonate formation accompanied by OM re-mineralization within sediments may have caused lower total organic carbon (TOC) content relative to that in black shales. However, elevated nutrient input related with hydrothermal fluid activity probably enhanced primary productivity during the Mn deposition period. It is evidenced by: (1) the Mn-TOC-total inorganic carbon covariation displayed by the Datangpo section and (2) a positive correlation between TOC and Mn content when Mn content is higher than 10% in a large compiled dataset. A compilation of Mo concentration and Mo isotope data suggests that widespread anoxia prevailed during the Cryogenian interglaciation. Instead, Neoproterozoic ocean oxygenation was postponed to the Ediacaran.