We investigated the effect of decreased pH on the morphology and nutrient physiology of the cosmopolitan marine diatom Thalassiosira rotula (CCMP3362) by acclimating unialgal cultures to two different CO2 gas concentrations under optimal light, temperature and nutrient conditions. At lower pH (higher CO2), T. rotula exhibited a reduction in cell diameter (7%), surface area (13%), and volume (20%), and an increase in surface area-to-volume ratio (7%). All measures of silicification in T. rotula, i.e., silica (SiO2) quota, rate of silicic acid (Si(OH)4) utilization, and elemental ratios of SiO2:C and SiO2:N, remained unchanged. Similarly, carbon (C) and nitrogen (N) quotas, ratios and utilization rates were mostly unaffected by pH. In contrast, the utilization rate of nitrate (ρNO3) was significantly lower at decreased pH when the rate was normalized by cell number instead of by cell volume. The changes in cell morphology found in this study under low pH were likely not large enough to significantly impact physiological processes and the role of this species in marine food webs and biogeochemical cycles. It is possible that the interactive effects of pH, temperature, light, and nutrient availability characteristic of different regions of the world ocean could result in stronger physiological and morphological responses in this widespread diatom. However, under constant optimal growth conditions, T. rotula was only mildly affected by changes in pH, and in particular the physiology and elemental stoichiometry of C, N and Si were not sensitive to acidification.