Optical Vegetation Indices Research Articles

Identification of optimal Sentinel-1 SAR polarimetric parameters for forest monitoring in Czechia

Time series analysis of synthetic aperture radar data (SAR) offers a systematic, dynamic and comprehensive way to monitor forests. The main emphasis of this study is on the identification of the most suitable and best performing Sentinel-1 SAR polarimetric parameters for forest monitoring. This is accomplished through: 1) a pairwise correlation analysis of SAR polarimetric parameters, multispectral optical vegetation indices and ancillary data, 2) a univariate binary time series classification for differentiation between forest types and 3) a visual exploration of time series. For this purpose, 600 validated broad-leaved and 600 coniferous forest areas in Czechia were used. Nine different SAR polarimetric parameters were examined, including VH and VV polarizations, VV/VH and VH/VV polarization ratios, the Radar Vegetation Index, Radar Forest Degradation Index, polarimetric radar vegetation index and the original and modified versions of the dual polarimetric SAR vegetation index. The pairwise correlation analysis revealed that most of the derived SAR polarimetric parameters were functions of each other with nearly identical behavior (r > |0.96|). The strongest correlation of r ~0.50 between SAR and optical features was found for broad-leaved forest for VV/VH and VH/VV. The highest overall accuracy in the time series classification of forest types was achieved by VH (76%), while for VV, VV/VH and VH/VV it was higher than 60%. Furthermore, the time series analysis of these parameters showed seasonal behaviors of the SAR features in both forest types. These results demonstrated the high relevance of using VH, VV, VV/VH and VH/VV time series in forest monitoring compared to other SAR polarimetric parameters. This study also introduces a novel pipeline to generate multi-modal time series datasets in Google Earth Engine (MMTS-GEE), used to generate data for the analysis. MMTS-GEE combines spatially and temporally aligned SAR and multispectral data, extended with topographic and weather data, and a land cover class label. Its high versatility enables its use in time series analyses, intercomparisons and in machine learning applications for tabular time series data. The GEE code for the proposed tool and analysis is freely available to the research community.

Soil moisture retrieval over croplands using novel dual-polarization SAR vegetation index

Synthetic Aperture Radar (SAR) data, known for its high spatial resolution and all-weather observation capabilities, holds immense promise in soil moisture monitoring. The Water Cloud Model (WCM) is widely applied in soil moisture inversion using SAR data. However, the optical vegetation indices employed in traditional WCM cannot synchronize with SAR data, and the polarimetric scattering information contained in current SAR vegetation indices is incomplete, consequently compromising the accuracy of SAR-based soil moisture retrieval. Therefore, this study proposes a method for soil moisture retrieval over cropland using a novel dual-polarization SAR vegetation index. The method initially combines SAR data covariance elements with backscatter information to establish a polarization scattering contrast parameter (mcp). Then, based on mcp and incorporating the degree of polarization, a polarization scattering correlation contrast parameter (Rcp) is defined. Rcp integrates the distinctive features of scattering differences and polarization states. Building on Rcp, a novel dual-polarization SAR vegetation index (DRVIs) is introduced. Ultimately, DRVIs are utilized in the WCM to achieve surface soil moisture retrieval in cropland. This research conducts experiments in four crop cover areas of the Carman test site in Canada, namely soybean, wheat, canola, and corn. Under VV and VH polarizations, the overall correlation coefficients between measured in-situ data and SSM estimates reach 0.89 and 0.84, respectively. Compared to SSM estimates based on NDVI and LAI products, SSM estimates based on DRVIs exhibit a notable improvement in accuracy, with enhancements of approximately 7.2% and 12.7%, respectively. This novel DRVIs is poised to expand the utilization of SAR data in monitoring vegetation growth and soil moisture retrieval.

Deep learning classification of winter wheat from Sentinel optical-radar image time series in smallholder farming areas

As crop yield stagnation, climate change, and the rising demand for agricultural products pose increasing challenges, mapping crop systems is becoming more and more important. Winter wheat is one of the major cereal crops cultivated in China, ranking as the third largest crop in terms of production and harvested area. Accurately mapping winter wheat is necessary for implementing effective farm management practices. While many studies have successfully produced high spatiotemporal resolution land cover maps, relatively few map products of crop types are available in China. The growing archive of satellite image time series provides enormous opportunities to map crops more closely. This research presents a two-step method to map winter wheat based on Sentinel-1 and Sentinel-2 time-series data from Shandong Province using the deep learning approaches. The winter crops were firstly mapped using time-series optical vegetation indices employing the deep learning methods. Then winter wheat was extracted from the winter crops mask by coupling optical and synthetic aperture radar time-series images. The results indicated that the precision of mapping winter wheat using Temporal Convolution Neural Networks (TempCNN) achieved the highest precision in mapping winter wheat, with an overall accuracy of 93.7 %, a kappa coefficient of 0.907, and an F1-score of 0.989. This was followed sequentially by the Residual 1D convolutional neural networks (ResNet), the Multi-Layer Perceptron (MLP), and the Lightweight Temporal Self-Attention Encoder (L-TAE). The Temporal Attention Encoder (TAE) model demonstrated the lowest precision among the compared models. The results agree well with independent county-level official census winter wheat area data (R2 = 0.936). The proposed framework can also be applied in other regions to generate maps of different crops, so future work can extend the proposed model to other agricultural regions, where an increased number of crop types and natural vegetation types can be included and tested.

A novel AMSR2 retrieval algorithm for global C-band vegetation optical depth and soil moisture (AMSR2 IB): Parameters' calibration, evaluation and inter-comparison

Effective monitoring of soil and vegetation properties on a global scale is essential for better understanding climate changes, hydrological dynamics, and ecological processes. Passive microwave remote sensing at C-band radio frequency, with long observation period and relatively high penetration capability, has been widely used to retrieve soil moisture (SM) and vegetation optical depth (C-VOD). The retrieval process is generally achieved by inversion of the τ-ω radiative transfer model, which depends on crucial parameters such as effective scattering albedo (ω) and soil roughness (HR) for accurate retrievals. Current SM/C-VOD retrieval algorithms, such as the Land Parameter Retrieval Model (LPRM), predominantly rely on globally-constant ω and HR values, ignoring the inherent sensitivity of those parameters to varying soil conditions and vegetation types. To evaluate the impact of ω and HR variables on SM and C-VOD retrievals and to improve their accuracy, this study proposed and evaluated a novel retrieval approach from AMSR2 C-band observations during 2017–2020 using the C-band Microwave Emission of the Biosphere (C-MEB) model. We evaluated two new retrieval algorithms, considering either a globally-constant calibration or a land cover-based calibration of ω and HR. As a benchmark for the calibration, we optimized the values of ω and HR by evaluating the retrieved SM against in situ measurements from the International Soil Moisture Network (ISMN) and OzNet hydrological monitoring networks. The main originality compared to previous algorithms is that i) it includes a comprehensive calibration exploring the optimal values of ω and HR, applicable globally or tailored to specific land cover; ii) field SM measurements were leveraged to constrain the calibrated value of ω and HR.For the globally-constant calibration, the optimal values of ω = 0.05 and HR = 0.1 were found to yield the best results. For the land cover-based calibration, an inverse relationship between ω/HR and canopy height was observed, with ω ranging from 0.04 to 0.06 and HR ranging from 0.1 to 0.7 for heights between 0 and 30 m. The algorithm employing a land cover-based calibration (INRAE Bordeaux 2, IB2) exhibited better performance than the one utilizing a globally-constant calibration (INRAE Bordeaux 1, IB1) in evaluating retrieved SM against in situ measurements, as well as in evaluating C-VOD vs various vegetation variables including aboveground biomass (AGB), tree cover, canopy height and several optical vegetation indices. Comparison with LPRM suggested that our IB2 C-VOD retrievals present improved performances in terms of both spatial and temporal results with all considered vegetation variables (spatial correlation (R) between various vegetation variables and C-VOD of 0.76–0.83 for IB2 vs 0.69–0.79 for LPRM), and exhibited lower saturation effects when compared with AGB. In addition, the IB2 SM produced lower root mean squared error (RMSE) (0.147 vs 0.217 m3/m3), bias (−0.03 vs 0.09 m3/m3), and ubRMSE (0.066 vs 0.067 m3/m3) when compared with in situ measurements, although it showed a lower R compared to LPRM SM.

Monitoring Cover Crop Biomass in Southern Brazil Using Combined PlanetScope and Sentinel-1 SAR Data

Precision agriculture integrates multiple sensors and data types to support farmers with informed decision-making tools throughout crop cycles. This study evaluated Aboveground Biomass (AGB) estimates of Rye using attributes derived from PlanetScope (PS) optical, Sentinel-1 Synthetic Aperture Radar (SAR), and hybrid (optical plus SAR) datasets. Optical attributes encompassed surface reflectance from PS’s blue, green, red, and near-infrared (NIR) bands, alongside the Normalized Difference Vegetation Index (NDVI) and Enhanced Vegetation Index (EVI). Sentinel-1 SAR attributes included the C-band Synthetic Aperture Radar Ground Range Detected, VV and HH polarizations, and both Ratio and Polarization (Pol) indices. Ground reference AGB data for Rye (Secale cereal L.) were collected from 50 samples and four dates at a farm located in southern Brazil, aligning with image acquisition dates. Multiple linear regression models were trained and validated. AGB was estimated based on individual (optical PS or Sentinel-1 SAR) and combined datasets (optical plus SAR). This process was repeated 100 times, and variable importance was extracted. Results revealed improved Rye AGB estimates with integrated optical and SAR data. Optical vegetation indices displayed higher correlation coefficients (r) for AGB estimation (r = +0.67 for both EVI and NDVI) compared to SAR attributes like VV, Ratio, and polarization (r ranging from −0.52 to −0.58). However, the hybrid regression model enhanced AGB estimation (R2 = 0.62, p < 0.01), reducing RMSE to 579 kg·ha−1. Using only optical or SAR data yielded R2 values of 0.51 and 0.42, respectively (p < 0.01). In the hybrid model, the most important predictors were VV, NIR, blue, and EVI. Spatial distribution analysis of predicted Rye AGB unveiled agricultural zones associated with varying biomass throughout the cover crop development. Our findings underscored the complementarity of optical with SAR data to enhance AGB estimates of cover crops, offering valuable insights for agricultural zoning to support soil and cash crop management.

The potential of optical and SAR time-series data for the improvement of aboveground biomass carbon estimation in Southwestern China’s evergreen coniferous forests

ABSTRACT Accurate assessments of forest biomass carbon are invaluable for managing forest resources, evaluating effects on ecological protection, and achieving goals related to climate change and sustainable development. Currently, the integration of optical and synthetic aperture radar (SAR) data has been extensively utilized in estimating forest aboveground biomass carbon (AGC), while it is limited by using single-phase remote sensing images. Time-series data, which capture the interannual dynamic growth and seasonal variations of photosynthetic phenology in forests, can sufficiently describe forest growth characteristics. However, there remains a gap in research focusing on utilizing satellite-based time-series data for AGC estimation, especially for SAR sensors. This study investigated the potential of satellite-based optical and SAR time-series data for estimating AGC. Here, we undertook nine quantitative experiments of AGC estimation from Landsat 8 and Sentinel-1 and tested several regression algorithms (including multiple linear regression (MLR), random forests (RF), artificial neural network (ANN), and extreme gradient boosting (XGBoost)) to explore the contributions of spatiotemporal features to AGC estimation. The results suggested that the XGBoost algorithm was suitable for AGC estimation with explanatory solid power and stable performance. The temporal features representing forest growth trends and periodic change characteristics (such as coefficients of continuous wavelet transform) were more valuable for AGC estimation than spatial features for both sensor types, accounting for around 40% ~50% of the variance compared to 17% ~25%. The combination of optical and SAR time-series data produced the best performance (R2 = 0.814, RMSE = 18.789 Mg C/ha, rRMSE = 26.235%), compared with when utilizing optical or SAR time-series data alone (optical: R2 of 0.657 and rRMSE of 35.317%; SAR: R2 of 0.672 and rRMSE of 34.701%). Feature importance analysis also verified that temporal features of optical vegetation indices, SWIR 1/2 bands, and SAR backscatter from VV polarization were the most critical variables for AGC estimation. Furthermore, incorporating temporal features into the modeling is illustrated to be effective in reducing saturation effects within high-biomass forests. This study demonstrated the superiority of time-series data for forest carbon estimation. While the applicability of this methodology has only been investigated in evergreen coniferous forests, it may provide a viable approach needed to make full use of increasingly better and free satellite time-series data to estimate forest AGC with high accuracy, supporting policy making of forest management and sustainable development.

Evaluation of optical and microwave-derived vegetation indices for monitoring aboveground biomass over China

ABSTRACT The microwave-derived vegetation optical depth (VOD) products were used to monitor aboveground biomass (AGB) at regional to global scales, but the ability of VOD to monitor AGB in China is uncertain. This study evaluated the sensitivity of four VOD products (e.g. L-VOD, IB-VOD, LPDR-VOD, and Liu-VOD) and optical vegetation indices (VI) (e.g. NDVI, EVI, LAI, and tree cover from MODIS) to the AGB across China. Our results showed tree cover product has the highest spatial agreement with reference AGBs (indicated by the median correlation value of 0.85), followed by L-VOD (with a median correlation value of 0.80), which performs better than other VIs and VODs. Further comparisons between reference and estimated AGB computed using the fitted logistic regression showed that AGB estimations from tree cover and L-VOD outperformed the estimations from other VIs and VODs over most vegetation types (except forest), indicated by the higher median correlation value of 0.86 and 0.83 and lower RMSD of 23.9 and 27.3 Mg/ha, respectively. The good performance of tree cover could be partly due to that tree cover product is not independent from the reference AGBs. The good performance of L-VOD can be explained by its higher sensitivity to the vegetation characteristics of the entire canopy (including woody component), relative to other VODs and VIs. Among the six reference AGB products, Saatchi-WT and Saatchi-RF products were found to have the best correlations with VIs and VODs. This study demonstrates that microwave VODs, particularly L-VOD, are effective proxies for large-scale monitoring of vegetation AGB in China.

Optimal Integration of Optical and SAR Data for Improving Alfalfa Yield and Quality Traits Prediction: New Insights into Satellite-Based Forage Crop Monitoring

Global food security and nutrition is suffering from unprecedented challenges. To reach a world without hunger and malnutrition by implementing precision agriculture, satellite remote sensing plays an increasingly important role in field crop monitoring and management. Alfalfa, a global widely distributed forage crop, requires more attention to predict its yield and quality traits from satellite data since it supports the livestock industry. Meanwhile, there are some key issues that remain unknown regarding alfalfa remote sensing from optical and synthetic aperture radar (SAR) data. Using Sentinel-1 and Sentinel-2 satellite data, this study developed, compared, and further integrated new optical- and SAR-based satellite models for improving alfalfa yield and quality traits prediction, i.e., crude protein (CP), acid detergent fiber (ADF), neutral detergent fiber (NDF), and neutral detergent fiber digestibility (NDFD). Meanwhile, to better understand the physical mechanism of alfalfa optical remote sensing, a unified hybrid leaf area index (LAI) retrieval scheme was developed by coupling the PROSAIL radiative transfer model, spectral response function of the desired optical satellite, and a random forest (RF) model, denoted as a scalable optical satellite-based LAI retrieval framework. Compared to optical vegetation indices (VIs) that only capture canopy information, the results indicate that LAI had the highest correlation (r = 0.701) with alfalfa yield due to its capacity in delivering the vegetation structure characteristics. For alfalfa quality traits, optical chlorophyll VIs presented higher correlations than LAI. On the other hand, LAI did not provide a significant additional contribution for predicting alfalfa parameters in the RF developed optical prediction model using VIs as inputs. In addition, the optical-based model outperformed the SAR-based model for predicting alfalfa yield, CP, and NDFD, while the SAR-based model showed better performance for predicting ADF and NDF. The integration of optical and SAR data contributed to higher accuracy than either optical or SAR data separately. Compared to a traditional embedded integration approach, the combination of multisource heterogeneous optical and SAR satellites was optimized by multiple linear regression (yield: R2 = 0.846 and RMSE = 0.0354 kg/m2; CP: R2 = 0.636 and RMSE = 1.57%; ADF: R2 = 0.559 and RMSE = 1.926%; NDF: R2 = 0.58 and RMSE = 2.097%; NDFD: R2 = 0.679 and RMSE = 2.426%). Overall, this study provides new insights into forage crop yield prediction for large-scale fields using multisource heterogeneous satellites.

Improved potato AGB estimates based on UAV RGB and hyperspectral images

Crops' above-ground biomass (AGB) is a crucial indicator that reflects crop health and predicts crop yield. However, using only optical vegetation indices (VIs) can produce inaccurate AGB estimates due to differences in crop varieties, growth stages, and measurement environments. Given the advantages of unmanned aerial vehicle (UAV) RGB and hyperspectral image fusion, this study evaluated the performance of multi-source remote sensing data for estimating potato AGB at multiple growth stages. In 2019, this study conducted potato trials with different varieties, fertilization levels, and planting densities at the Xiaotangshan Experiment Base (Beijing). UAV image and AGB data of potato three main stages were obtained from ground survey work. High-frequency information of the potato canopy was extracted from RGB images using discrete wavelet transform (DWT). VIs and wavelet energy coefficients were extracted from hyperspectral images using continuous wavelet transform (CWT). The linear relationships between potato AGB with VIs, high-frequency information, and wavelet coefficients were analyzed. Potato AGB estimation models were constructed based on single and multiple types of variables using multiple stepwise regression (MSR) and random forest (RF) models, respectively. This work showed the following results: (i) High-frequency information and wavelet coefficients were more sensitive to potato multi-growth stage AGB than VIs, and the latter were the most sensitive. (ii) Using VIs, high-frequency information, or wavelet coefficients separately to estimate the potato multi-growth stage AGB resulted in higher error and lower model accuracy. (iii) Combining VIs with either high-frequency information or wavelet coefficients improved the accuracy of AGB estimation, which was further improved by combining high-frequency information with wavelet coefficients. (iv) Combining VIs with both high-frequency information and wavelet coefficients provided the highest estimation accuracy using the MSR method. This combined AGB estimation model reduced the RMSE by 27%, 21%, and 16%, respectively, relative to VIs, high-frequency information, or wavelet coefficients alone. This result shows that the complementary advantages of multi-source UAV data can solve the challenge of insufficient AGB estimation by optical remote sensing. The work in this study provides remote sensing technology support to achieve potato crop growth monitoring and improve yield predictions.

Reliability of vegetation resilience estimates depends on biomass density

Concerns have been raised that the resilience of vegetated ecosystems may be negatively impacted by ongoing anthropogenic climate and land-use change at the global scale. Several recent studies present global vegetation resilience trends based on satellite data using diverse methodological set-ups. Here, upon a systematic comparison of data sets, spatial and temporal pre-processing, and resilience estimation methods, we propose a methodology that avoids different biases present in previous results. Nevertheless, we find that resilience estimation using optical satellite vegetation data is broadly problematic in dense tropical and high-latitude boreal forests, regardless of the vegetation index chosen. However, for wide parts of the mid-latitudes—especially with low biomass density—resilience can be reliably estimated using several optical vegetation indices. We infer a spatially consistent global pattern of resilience gain and loss across vegetation indices, with more regions facing declining resilience, especially in Africa, Australia and central Asia.

Upscaling dryland carbon and water fluxes with artificial neural networks of optical, thermal, and microwave satellite remote sensing

Abstract. Earth's drylands are home to more than two billion people, provide key ecosystem services, and exert a large influence on the trends and variability in Earth's carbon cycle. However, modeling dryland carbon and water fluxes with remote sensing suffers from unique challenges not typically encountered in mesic systems, particularly in capturing soil moisture stress. Here, we develop and evaluate an approach for the joint modeling of dryland gross primary production (GPP), net ecosystem exchange (NEE), and evapotranspiration (ET) in the western United States (US) using a suite of AmeriFlux eddy covariance sites spanning major functional types and aridity regimes. We use artificial neural networks (ANNs) to predict dryland ecosystem fluxes by fusing optical vegetation indices, multitemporal thermal observations, and microwave soil moisture and temperature retrievals from the Soil Moisture Active Passive (SMAP) sensor. Our new dryland ANN (DrylANNd) carbon and water flux model explains more than 70 % of monthly variance in GPP and ET, improving upon existing MODIS GPP and ET estimates at most dryland eddy covariance sites. DrylANNd predictions of NEE were considerably worse than its predictions of GPP and ET likely because soil and plant respiratory processes are largely invisible to satellite sensors. Optical vegetation indices, particularly the normalized difference vegetation index (NDVI) and near-infrared reflectance of vegetation (NIRv), were generally the most important variables contributing to model skill. However, daytime and nighttime land surface temperatures and SMAP soil moisture and soil temperature also contributed to model skill, with SMAP especially improving model predictions of shrubland, grassland, and savanna fluxes and land surface temperatures improving predictions in evergreen needleleaf forests. Our results show that a combination of optical vegetation indices and thermal infrared and microwave observations can substantially improve estimates of carbon and water fluxes in drylands, potentially providing the means to better monitor vegetation function and ecosystem services in these important regions that are undergoing rapid hydroclimatic change.

Seasonal variations in vegetation water content retrieved from microwave remote sensing over Amazon intact forests

Vegetation optical depth (VOD) is seasonally sensitive to plant water content and aboveground biomass. This index has a strong penetrability within the vegetation canopy and is less impacted by atmosphere aerosol contamination effects, clouds and sun illumination than optical vegetation indices. VOD is thus increasingly applied in ecological applications, e.g., carbon stock, phenology and vegetation monitoring. However, VOD retrieval over dense forests is subject to uncertainties caused by the thick canopy and complex multiple scattering effects. Thus, a comprehensive evaluation of VOD products over dense forests is needed for effective and accurate applications. This study evaluated the seasonal variations of eight recently developed/reprocessed VOD products at different frequencies (e.g., Ku-, X-, C- and L-band) over Amazon intact forests, supported by the ORCHIDEE-CAN-NHA model-simulated vegetation water content. Furthermore, we also explored the potential causes of VOD retrieval issues, in terms of retrieval algorithm uncertainties.We first confirmed that soil water availability dominated seasonal dynamics of vegetation water content over Amazon intact forests. This was verified by model-simulated vegetation water content and by C-band radar backscatter observations. Generally, evening or midday vegetation water content shows higher correlations with soil moisture than morning or midnight vegetation water content. In terms of ability of morning or midnight VOD products to follow the seasonality of soil moisture, active microwave ASCAT-IB C-VOD (median seasonal correlation with soil moisture (R) ∼ 0.50) outperforms the passive microwave VOD products, followed by passive microwave AMSR2 X-VOD (R ∼ 0.26) and VODCA X-VOD (R ∼ 0.16). However, SMOS-IC L-VOD (R ∼ −0.15) and AMSR2 C1-VOD (R ∼ −0.20) show obviously negative seasonal correlations with soil moisture across most pixels. This implausible behavior is likely to be caused by the inappropriate setting of time-invariant scattering effects in the passive microwave VOD retrieval algorithms, which could lead to an overestimation of the VOD amplitude during dry seasons. Thus, we recommend that the seasonal scattering effects be considered in the passive microwave VOD retrieval algorithms. These findings can contribute to the improvement of VOD retrieval algorithms and help with the development of their ecological applications over Amazon dense forests.

Retrieval of High-Resolution Vegetation Optical Depth from Sentinel-1 Data over a Grassland Region in the Heihe River Basin

Vegetation optical depth (VOD), as a microwave-based estimate of vegetation water and biomass content, is increasingly used to study the impact of global climate and environmental changes on vegetation. However, current global operational VOD products have a coarse spatial resolution (~25 km), which limits their use for agriculture management and vegetation dynamics monitoring at regional scales (1–5 km). This study aims to retrieve high-resolution VOD from the C-band Sentinel-1 backscatter data over a grassland of the Heihe River Basin in northwestern China. The proposed approach used an analytical solution of a simplified Water Cloud Model (WCM), constrained by given soil moisture estimates, to invert VOD over grassland with 1 km spatial resolution during the 2018–2020 period. Our results showed that the VOD estimates exhibited large spatial variability and strong seasonal variations. Furthermore, the dynamics of VOD estimates agreed well with optical vegetation indices, i.e., the mean temporal correlations with normalized difference vegetation index (NDVI), enhanced vegetation index (EVI), and leaf area index (LAI) were 0.76, 0.75, and 0.75, respectively, suggesting that the VOD retrievals could precisely capture the dynamics of grassland.

A comparison of radar and optical remote sensing to detect cyclone-induced canopy disturbance in two subtropical forest landscapes

Optical remote sensing is a tool frequently used to assess cyclone-induced forest disturbances. However, the frequent cloud cover limits the availability of optical data in cyclone basins. On the other hand, radar remote sensing is not affected by cloud cover and has been used to detect windthrows. Yet, the potential of radar sensing in monitoring cyclone damages of varying magnitudes across forest landscapes remains unclear. Here, we compared radar remote sensing to optical remote sensing of four cyclone disturbances in the Fushan Experimental Forest of northern Taiwan and the El Yunque National Forest in Puerto Rico using Landsat 8 and C-band Sentinel-1 satellite data. We analyzed the change in two optical vegetation indices, EVI (Enhanced Vegetation Index) and NDII (Normalized Difference Infrared Index), and three radar-based metrics, co- and cross-polarized backscatters (VV, VH) and their ratio (Canopy Development Index, CDI) after cyclone disturbances and during approximately the same periods of non-cyclone years. We assessed the improved temporal resolution permitted by Sentinel-1 constellation on the detection of forest canopy disturbance. Bootstrapped comparisons indicated that both optical and radar indices detected canopy change, but their correlations were not significant. Improved temporal resolution of CDI allowed to distinguish cyclone-induced canopy change from the phenological variation and even change by nearby cyclones. Although this, VV and VH backscatters responded more closely to cyclone disturbances than their ratio. Our results demonstrate that the C-band backscatter intensities can track cyclone-induced change of forest canopies, and provide an assessment of C-band capabilities to monitor cyclone disturbances.

Estimation of potato above-ground biomass based on unmanned aerial vehicle red-green-blue images with different texture features and crop height

Obtaining crop above-ground biomass (AGB) information quickly and accurately is beneficial to farmland production management and the optimization of planting patterns. Many studies have confirmed that, due to canopy spectral saturation, AGB is underestimated in the multi-growth period of crops when using only optical vegetation indices. To solve this problem, this study obtains textures and crop height directly from ultrahigh-ground-resolution (GDS) red-green-blue (RGB) images to estimate the potato AGB in three key growth periods. Textures include a grayscale co-occurrence matrix texture (GLCM) and a Gabor wavelet texture. GLCM-based textures were extracted from seven-GDS (1, 5, 10, 30, 40, 50, and 60 cm) RGB images. Gabor-based textures were obtained from magnitude images on five scales (scales 1–5, labeled S1–S5, respectively). Potato crop height was extracted based on the generated crop height model. Finally, to estimate potato AGB, we used (i) GLCM-based textures from different GDS and their combinations, (ii) Gabor-based textures from different scales and their combinations, (iii) all GLCM-based textures combined with crop height, (iv) all Gabor-based textures combined with crop height, and (v) two types of textures combined with crop height by least-squares support vector machine (LSSVM), extreme learning machine, and partial least squares regression techniques. The results show that (i) potato crop height and AGB first increase and then decrease over the growth period; (ii) GDS and scales mainly affect the correlation between GLCM- and Gabor-based textures and AGB; (iii) to estimate AGB, GLCM-based textures of GDS1 and GDS30 work best when the GDS is between 1 and 5 cm and 10 and 60 cm, respectively (however, estimating potato AGB based on Gabor-based textures gradually deteriorates as the Gabor convolution kernel scale increases); (iv) the AGB estimation based on a single-type texture is not as good as estimates based on multi-resolution GLCM-based and multiscale Gabor-based textures (with the latter being the best); (v) different forms of textures combined with crop height using the LSSVM technique improved by 22.97, 14.63, 9.74, and 8.18% (normalized root mean square error) compared with using only all GLCM-based textures, all Gabor-based textures, the former combined with crop height, and the latter combined with crop height, respectively. Therefore, different forms of texture features obtained from RGB images acquired from unmanned aerial vehicles and combined with crop height improve the accuracy of potato AGB estimates under high coverage.

Optical vegetation indices for monitoring terrestrial ecosystems globally

Optical vegetation indices for monitoring terrestrial ecosystems globally

Remote-sensing estimation of potato above-ground biomass based on spectral and spatial features extracted from high-definition digital camera images

Above-ground biomass (AGB) is a significant phenotypic index for evaluating photosynthesis capacity, healthy growth, and estimating crop yield. Accurately monitoring the AGB helps improve agricultural fertilization management and optimize planting patterns. Numerous studies have confirmed that canopy spectrum saturation causes optical vegetation indices (VIs) to underestimate the AGB of crops at multiple growth periods. To solve this problem, the present research used a remote sensing method to obtain RGB images of potato tuber formation-, tuber growth-, and starch accumulation- periods by a high-definition digital camera sensor on the unmanned aerial vehicle (UAV). From the ultrahigh spatial resolution RGB images, we then extracted RGB-VIs, textures (based on the gray level co-occurrence matrix, GLCM), and crop height (Hdsm) and analyzed the correlation between the three image features and the potato AGB for single and multiple growth periods. Finally, we estimated potato AGB at multiple growth periods based on (1) RGB-VIs, (2) RGB-VIs + GLCM-based textures, (3) RGB-VIs + Hdsm, and (4) RGB-VIs + GLCM-based textures + Hdsm by applying multiple stepwise regression (MSR) and extreme learning machine (ELM). The results showed that (i) unlike the texture features of wheat and maize that increased with growth period, the texture features and crop height of the potato canopy both increased first and then decreased with the growth period. (ii) The potato AGB was poorly estimated when using RGB-VIs, CLCM-based textures, or Hdsm individually; (iii) combining GLCM-based textures, Hdsm, and RGB-VIs solved the problem of underestimating the high AGB values of potato samples by the RGB-VIs model alone. Therefore, combining GLCM-based textures, Hdsm, and RGB-VIs obtained from UAV digital images could enhance the accuracy of potato AGB estimation under high coverage.

Integration of Satellite-Based Optical and Synthetic Aperture Radar Imagery to Estimate Winter Cover Crop Performance in Cereal Grasses

The magnitude of ecosystem services provided by winter cover crops is linked to their performance (i.e., biomass and associated nitrogen content, forage quality, and fractional ground cover), although few studies quantify these characteristics across the landscape. Remote sensing can produce landscape-level assessments of cover crop performance. However, commonly employed optical vegetation indices (VI) saturate, limiting their ability to measure high-biomass cover crops. Contemporary VIs that employ red-edge bands have been shown to be more robust to saturation issues. Additionally, synthetic aperture radar (SAR) data have been effective at estimating crop biophysical characteristics, although this has not been demonstrated on winter cover crops. We assessed the integration of optical (Sentinel-2) and SAR (Sentinel-1) imagery to estimate winter cover crops biomass across 27 fields over three winter–spring seasons (2018–2021) in Maryland. We used log-linear models to predict cover crop biomass as a function of 27 VIs and eight SAR metrics. Our results suggest that the integration of the normalized difference red-edge vegetation index (NDVI_RE1; employing Sentinel-2 bands 5 and 8A), combined with SAR interferometric (InSAR) coherence, best estimated the biomass of cereal grass cover crops. However, these results were season- and species-specific (R2 = 0.74, 0.81, and 0.34; RMSE = 1227, 793, and 776 kg ha−1, for wheat (Triticum aestivum L.), triticale (Triticale hexaploide L.), and cereal rye (Secale cereale), respectively, in spring (March–May)). Compared to the optical-only model, InSAR coherence improved biomass estimations by 4% in wheat, 5% in triticale, and by 11% in cereal rye. Both optical-only and optical-SAR biomass prediction models exhibited saturation occurring at ~1900 kg ha−1; thus, more work is needed to enable accurate biomass estimations past the point of saturation. To address this continued concern, future work could consider the use of weather and climate variables, machine learning models, the integration of proximal sensing and satellite observations, and/or the integration of process-based crop-soil simulation models and remote sensing observations.

Simulation of Isoprene Emission with Satellite Microwave Emissivity Difference Vegetation Index as Water Stress Factor in Southeastern China during 2008

Isoprene is one of the most important biogenic volatile organic compounds (BVOCs) emitted by vegetation. The biogenic isoprene emissions are widely estimated by the Model of Emission of Gases and Aerosols from Nature (MEGAN) considering different environmental stresses. The response of isoprene emission to the water stress is usually parameterized using soil moisture in previous studies. In this study, we designed a new parameterization scheme of water stress in MEGAN as a function of a novel, satellite, passive microwave-based vegetation index, Emissivity Difference Vegetation Index (EDVI), which indicates the vegetation inner water content. The isoprene emission rates in southeastern China were simulated with different water stress indicators including soil moisture, EDVI, Normalized Difference Vegetation Index (NDVI) and Enhanced Vegetation Index (EVI). Then the simulated isoprene emission rates were compared to associated satellite top-down estimations. The results showed that in southeastern China, the spatiotemporal correlations between those simulations and top-down retrieval are all high with different biases. The simulated isoprene emission rates with EDVI-based water stress factor are most consistent with top-down estimation with higher temporal correlation, lower bias and lower RMSE, while soil moisture alters the emission rates little, and optical vegetation indices (NDVI and EVI) slightly increase the correlation with top-down. The temporal correlation coefficients are increased after applied with EDVI water stress factor in most areas; especially in the Yunnan-Guizhou Plateau and Yangtze River Delta (>0.12). Overall, higher consistency of simulation and top-down estimation is shown when EDVI is applied, which indicates the possibility of estimating the effect of vegetation water stress on biogenic isoprene emission using microwave observations.

A Machine Learning approach to reconstruct cloudy affected vegetation indices imagery via data fusion from Sentinel-1 and Landsat 8

• A machine learning based method is proposed to fusion optical and radar images. • Radar vegetation observations were suitable to predict optical vegetation indices. • Random forest algorithm showed best performance in predicting vegetation indices. • Random forest models reconstructed vegetation indices images affected by clouds. A way to reconstruct optical sensor-derived images allowing cloud-free vegetation monitoring is proposed in this paper. The motivation is the influence that clouds have on optical remote sensing of tropical regions, which hinders Earth observation systems because their presence reduces imaging frequency. To circumvent that problem, a machine learning model-based integration methodology for the fusion of Landsat 8 and Sentinel-1 data is proposed herein. Sentinel-1 constellation has mounted Synthetic aperture radar (SAR) sensors are used because the imaging is not affected by clouds due to microwave spectrum characteristics. To study the problem and predict both the normalized difference vegetation index (NDVI) and enhanced vegetation index (EVI), three algorithms were selected: multivariate linear regression, multivariate adaptive regression splines, and random forest (RF). Two testing strategies were also chosen: k-Fold cross-validation for hyperparameter tuning of the model and holdout testing to assess the generalization ability of the model. The SAR covariables were employed to feed the algorithms, including selected SAR vegetation indices; in addition, environmental data, such as land use and land cover (LULC), the date, and position of the samples were used. The predictions from the NDVI and EVI produced good results, namely, similar Willmott’s agreement index (d) values that ranged from ∼0.64 to 0.96. The best-fitted model was the RF, which was used to reconstruct the NDVI images and produced good results that agreed well with the predictions (d index from 0.58 to 0.87) and spatial patterns. The results obtained show that the integration of radar and environmental covariables with optical vegetation indices can allow vegetation monitoring that is free of gaps due to clouds.