Open Ocean Waters Research Articles

Transfer of diazotroph-derived nitrogen to the planktonic food web across gradients of N<sub>2</sub> fixation activity and diversity in the western tropical South Pacific Ocean

Abstract. Biological dinitrogen (N2) fixation provides the major source of new nitrogen (N) to the open ocean, contributing more than atmospheric deposition and riverine inputs to the N supply. Yet the fate of the diazotroph-derived N (DDN) in the planktonic food web is poorly understood. The main goals of this study were (i) to quantify how much of DDN is released to the dissolved pool during N2 fixation and how much is transferred to bacteria, phytoplankton and zooplankton, and (ii) to compare the DDN release and transfer efficiencies under contrasting N2 fixation activity and diversity in the oligotrophic waters of the western tropical South Pacific (WTSP) Ocean. We used nanometre-scale secondary ion mass spectrometry (nanoSIMS) coupled with 15N2 isotopic labelling and flow cytometry cell sorting to track the DDN transfer to plankton, in regions where the diazotroph community was dominated by either Trichodesmium or by UCYN-B. After 48 h, ∼ 20–40 % of the N2 fixed during the experiment was released to the dissolved pool when Trichodesmium dominated, while the DDN release was not quantifiable when UCYN-B dominated; ∼ 7–15 % of the total fixed N (net N2 fixation + release) was transferred to non-diazotrophic plankton within 48 h, with higher transfer efficiencies (15 ± 3 %) when UCYN-B dominated as compared to when Trichodesmium dominated (9 ± 3 %). The pico-cyanobacteria Synechococcus and Prochlorococcus were the primary beneficiaries of the DDN transferred (∼ 65–70 %), followed by heterotrophic bacteria (∼ 23–34 %). The DDN transfer in bacteria was higher (34 ± 7 %) in the UCYN-B-dominating experiment compared to the Trichodesmium-dominating experiments (24 ± 5 %). Regarding higher trophic levels, the DDN transfer to the dominant zooplankton species was less efficient when the diazotroph community was dominated by Trichodesmium (∼ 5–9 % of the DDN transfer) than when it was dominated by UCYN-B (∼ 28 ± 13 % of the DDN transfer). To our knowledge, this study provides the first quantification of DDN release and transfer to phytoplankton, bacteria and zooplankton communities in open ocean waters. It reveals that despite UCYN-B fix N2 at lower rates compared to Trichodesmium in the WTSP, the DDN from UCYN-B is much more available and efficiently transferred to the planktonic food web than the DDN originating from Trichodesmium.

A Reconstruction Method for Hyperspectral Remote Sensing Reflectance in the Visible Domain and Applications

AbstractA reconstruction method was developed for hyperspectral remote sensing reflectance (Rrs) data in the visible domain (400–700 nm) based on in situ observations. A total of 2,647 Rrs spectra were collected over a wide variety of water environments including open ocean, coastal and inland waters. Ten schemes with different band numbers (6 to 15) were tested based on a nonlinear model. It was found that the accuracy of the reconstruction increased with the increase of input band numbers. Eight of these schemes met the accuracy criterion with the mean absolute error (MAE) and mean relative error (MRE) values between reconstructed and in situ Rrs less than 0.00025 sr−1 and 5%, respectively. We chose the eight‐band scheme for further evaluation because of its decent performance. The results revealed that the parameterization derived by the eight‐band scheme was efficient for restoring Rrs spectra from different water bodies. In contrast to the previous studies that used a linear model with 15 spectral bands, the nonlinear model with the eight‐band scheme yielded a comparable reconstruction performance. The MAE and MRE values were generally less than 0.00016 sr−1 and 3% respectively; much lower than the uncertainties in satellite‐derived Rrs products. Furthermore, a preliminary experiment of this method on the data from the Hyperspectral Imager for the Coastal Ocean (HICO) showed high potential in the future applications for reconstructing Rrs spectra from space‐borne optical sensors. Overall, the eight‐band scheme with our nonlinear model was proven to be optimal for hyperspectral Rrs reconstruction in the visible domain.

An improved primer set and amplification protocol with increased specificity and sensitivity targeting the Symbiodinium ITS2 region.

The Internal Transcribed Spacer 2 (ITS2) rRNA gene is a commonly targeted genetic marker to assess diversity of Symbiodinium, a dinoflagellate genus of algal endosymbionts that is pervasively associated with marine invertebrates, and notably reef-building corals. Here we tested three commonly used ITS2 primer pairs (SYM_VAR_5.8S2/SYM_VAR_REV, ITSintfor2/ITSReverse, and ITS-DINO/ITS2Rev2) with regard to amplification specificity and sensitivity towards Symbiodinium, as well as sub-genera taxonomic bias. We tested these primers over a range of sample types including three coral species, coral surrounding water, reef surface water, and open ocean water to assess their suitability for use in large-scale next generation sequencing projects and to develop a standardised PCR protocol. We found the SYM_VAR_5.8S2/SYM_VAR_REV primers to perform superior to the other tested ITS2 primers. We therefore used this primer pair to develop a standardised PCR protocol. To do this, we tested the effect of PCR-to-PCR variation, annealing temperature, cycle number, and different polymerase systems on the PCR efficacy. The Symbiodinium ITS2 PCR protocol developed here delivers improved specificity and sensitivity towards Symbiodinium with apparent minimal sub-genera taxonomic bias across all sample types. In particular, the protocol’s ability to amplify Symbiodinium from a range of environmental sources will facilitate the study of Symbiodinium populations across biomes.

Coastal zones as important habitats of coccolithophores: A study of species diversity, succession, and life‐cycle phases

AbstractCoccolithophores are unicellular calcifying eukaryotes with a complex life‐cycle; they are important primary producers, and major drivers of global biogeochemical cycles. The majority of research on coccolithophores has been focused on open ocean waters, while the knowledge of their roles in coastal ecosystems is limited. Early 20thcentury studies of the Adriatic coast produced major taxonomic papers describing half of the projected diversity of coccolithophores. Afterwards, there have been only scarce records of their diversity and ecology in the Adriatic, and coastal systems in general. We aimed to assess coccolithophore diversity and species succession, and closely examine their ecological preferences in the coastal area of the northern Adriatic. We recorded coccolithophores throughout the year at 100% frequency, documented 52 taxa, abundances as high as 2.4 × 105cells L−1, and noted the winter domination over the phytoplankton community. Out of 52 observed coccolithophore taxa, 31 were heterococcolithophorids and 21 holococcolithophorids. Moreover, seven pairs of heterococcolith and holococcolith phases were noted, and two strategies of temporal separation of life‐cycle phases were observed. We report ecological preferences of those life‐cycle pairs and give in situ evidence that holo‐ and heterococcolith phases are widening the specie's ecological niches. This expansion allows the species to exploit a wider range of ecological conditions and enables phenotypic plasticity, important in response to changes in the environment. With this study we emphasize that coastal areas are highly productive for coccolithophore studies. Our results indicate that a shift in research effort on coccolithophores in the coastal waters is needed.

Living in a high CO2 world: a global meta‐analysis shows multiple trait‐mediated fish responses to ocean acidification

AbstractUnderstanding how marine organisms will be affected by global change is of primary importance to ensure ecosystem functioning and nature contributions to people. This study meets the call for addressing how life‐history traits mediate effects of ocean acidification on fish. We built a database of overall and trait‐mediated responses of teleost fish to future CO2 levels by searching the scientific literature. Using a meta‐analytical approach, we investigated the effects of projected CO2 levels by IPCC for 2050–2070 and 2100 on fish eco‐physiology and behavior from 320 contrasts on 42 species, stemming from polar to tropical regions. Moreover, since organisms may experience a mosaic of carbonate chemistry in coastal environments (e.g., in estuaries, upwelling zones and intertidal habitats), which may have higher pCO2 values than open ocean waters, we assessed responses from additional 103 contrasts on 21 fish species using pCO2 levels well above IPCC projections. Under mid‐century and end‐of‐century CO2 emission scenarios, we found multiple CO2‐dose‐dependent effects on calcification, resting metabolic rate, yolk, and behavioral performances, along with increased predation risk and decreased foraging, particularly for larvae. Importantly, many of the traits considered will not confer fish tolerance to elevated CO2 and far‐reaching ecological consequences on fish population replenishment and community structure will likely occur. Extreme CO2 levels well above IPCC projections showed effects on fish mortality and calcification, while growth, metabolism, and yolk were unaffected. CO2 exposures in short‐term experiments increased fish mortality, which in turn decreased in longer‐term exposures. Whatever the elevated CO2 levels considered, some key biological processes (e.g., reproduction, development, habitat choice) were critically understudied. Fish are an important resource for livelihoods in coastal communities and a key component for stability of marine ecosystems. Given the multiple trait‐mediated effects evidenced here, we stress the need to fill the knowledge gap on important eco‐physiological processes and to expand the number and duration of ocean acidification studies to multi‐generational, multiple stressor (e.g., warming, hypoxia, fishing), and species interactions experiments to better elucidate complex ecosystem‐level changes and how these changes might alter provisioning of ecosystem services.

An Ultra-clean Multilayer Apparatus for Collecting Size Fractionated Marine Plankton and Suspended Particles.

The distributions of many trace elements in the ocean are strongly associated with the growth, death, and re-mineralization of marine plankton and those of suspended/sinking particles. Here, we present an all plastic (Polypropylene and Polycarbonate), multi-layer filtration system for collection of suspended particulate matter (SPM) at sea. This ultra-clean sampling device has been designed and developed specifically for trace element studies. Meticulous selection of all non-metallic materials and utilization of an in-line flow-through procedure minimizes any possible metal contamination during sampling. This system has been successfully tested and tweaked for determining trace metals (e.g., Fe, Al, Mn, Cd, Cu, Ni) on particles of varying size in coastal and open ocean waters. Results from the South China Sea at the South East Asia Time-Series (SEATS) station indicate that diurnal variations and spatial distribution of plankton in the euphotic zone can be easily resolved and recognized. Chemical analysis of size-fractionated particles in surface waters of the Taiwan Strait suggests that the larger particles (>153 µm) were mostly biologically derived, while the smaller particles (10 - 63 µm) were mostly composed of inorganic matter. Apart from Cd, the concentrations of metals (Fe, Al, Mn, Cu, Ni) decreased with increasing size.

Open ocean vs. continentally-derived iron cycles along the Neoarchean Campbellrand-Malmani Carbonate platform, South Africa

The deposition of large amounts of mixed-valence Fe minerals in iron formations during the Archean and Paleoproterozoic indicates that the Fe(II)aq (aqueous) content of coeval anoxic seawater was likely several hundred μM, compared to ca. 1 to 20 nM of the modern oxygenated ocean. It has been suggested that oxygen production along shallow marine continental shelves, which probably started several hundred million years before the rise of atmospheric oxygen, effectively oxidized Fe(II)aq from deeper seawater and removed it as Fe(III)ppt (poorly soluble precipitates). However, the reconstruction of the marine Fe cycle during the Archean is still incomplete, partly because of diagenetic redox processes that challenge the interpretation of Fe concentration and isotope signatures of sedimentary archives. In this study, we present new Fe concentrations and isotope compositions of carbonate and mudrock samples from the Neoarchean Campbellrand-Malmani carbonate platform (CMCP) in South Africa. These samples are from the shelf facies of the CMCP and in combination with previously published data of Czaja and others (2012) from carbonates and mudrocks of the slope facies, we show that different depositional settings and conditions resulted in different data distributions. Coupled δ56Fe values (−3.685 to +0.083 ‰) and iron concentrations (861–27672 μg g−1) of pure carbonates deposited during open marine conditions, can be explained by partial Fe(II) oxidation between ferruginous deeper water and oxygenated shallow water, leaving the residual Fe(II)aq pool isotopically light, although Fe(II) oxidation by anoxygenic phototrophy cannot be ruled out. Pure carbonates deposited in a peritidal setting, with less exposure to open ocean water, show a smaller Fe isotope variability with δ56Fe values of −1.207 to −0.204 permil and Fe concentration range from 388 to 5413 μg g−1, respectively. We propose that the Fe systematics of peritidal carbonates were dominated by early diagenetic Fe cycling between carbonates and adjacent mudrocks. Synchrotron based X-ray adsorption spectroscopy reveals a change in Fe speciation, where Fe(II)-bearing ankerite and Fe-sulfide dominate the carbonates in the lower part of the CMCP, whereas carbonates of the upper part of the CMCP mainly contain Fe(III)-(oxyhydr)oxides. The fact that Fe(III) phases are still preserved argues for a higher oxidation state on the shelf of the upper CMCP. This is likely because of a lower content of reductants in those settings, in particular organic carbon, sulfide species, as well as restricted influx of reducing species from the anoxic open ocean due to the formation of a rimmed margin. Nevertheless, more studies of similar carbonate settings are necessary to verify our model. We propose that unfractionated Fe(II)aq in seawater was about two to three times lower on the shelf (30–310 μM) than along the slope (61–928 μM), which implies that Fe(II)aq was removed from the water column closer to the continent, likely by oxidation and precipitation. Overall, the Fe isotope composition and Fe speciation of CMCP sediments support the presence of molecular oxygen in the shallow-marine system and emphasize the utility of Ca-Mg carbonates as proxies for iron cycling in the aqueous environment.

Water Mass Control on Phytoplankton Spatiotemporal Variations in the Northeastern East China Sea and the Western Tsushima Strait Revealed by Lipid Biomarkers

AbstractContinental margin ecosystems in the western North Pacific Ocean are subject to strong climate forcing and anthropogenic impacts. To evaluate mechanisms controlling phytoplankton biomass and community structure variations in marginal sea‐open ocean boundary regions, brassicasterol, dinosterol, and C37 alkenones were measured in suspended particles in summer and autumn from 2012 to 2013 in the northeastern East China Sea and the western Tsushima Strait. In summer, the concentrations of brassicasterol (40–1535 ng/L) and dinosterol (4.2–94 ng/L) were higher in the southwest of Cheju Island, while C37 alkenones (0–30 ng/L) were higher in the south of Cheju Island. In autumn, brassicasterol (12–106 ng/L), dinosterol (2.4–21 ng/L), and C37 alkenones (0.7–7.0 ng/L) were higher in the southwest of Cheju Island and the western Tsushima Strait, and higher C37 alkenones also occurred in the Okinawa Trough. Correlation analysis of biomarkers and environmental conditions (temperature, salinity, and inorganic nutrient concentrations) clearly demonstrated that phytoplankton biomass and community structure variations can be well elucidated by water masses as indexed by temperature and salinity. High nutrients from the Changjiang River were the main cause of high biomass in summer, while nutrients from subsurface water were likely the key factor regulating phytoplankton biomass in open ocean water stations in autumn. This study indicates that mechanisms controlling phytoplankton biomass in marginal sea‐open ocean boundary regions should be classified by various water masses with different nutrient concentrations, instead of by geography.

Mercury in the Black Sea: New Insights From Measurements and Numerical Modeling.

Redox conditions and organic matter control marine methylmercury (MeHg) production. The Black Sea is the world's largest and deepest anoxic basin and is thus ideal to study Hg species along the extended redox gradient. Here we present new dissolved Hg and MeHg data from the 2013 GEOTRACES MEDBlack cruise (GN04_leg2) that we integrated into a numerical 1‐D model, to track the fate and dynamics of Hg and MeHg. Contrary to a previous study, our new data show highest MeHg concentrations in the permanently anoxic waters. Observed MeHg/Hg percentage (range 9–57%) in the anoxic waters is comparable to other subsurface maxima in oxic open‐ocean waters. With the modeling we tested for various Hg methylation and demethylation scenarios along the redox gradient. The results show that Hg methylation must occur in the anoxic waters. The model was then used to simulate the time evolution (1850–2050) of Hg species in the Black Sea. Our findings quantify (1) inputs and outputs of HgT (~31 and ~28 kmol yr−1) and MeHgT (~5 and ~4 kmol yr−1) to the basin, (2) the extent of net demethylation occurring in oxic (~1 kmol yr−1) and suboxic water (~6 kmol yr−1), (3) and the net Hg methylation in the anoxic waters of the Black Sea (~11 kmol yr−1). The model was also used to estimate the amount of anthropogenic Hg (85–93%) in the Black Sea.

Remote sensing of surface [nitrite + nitrate] in river-influenced shelf-seas: The northern South China Sea Shelf-sea

Sea surface concentrations of [nitrite + nitrate], [N + N], have been assessed successfully by remote sensing in the open oceans by utilizing its relationship to sea surface temperature (SST). A similar approach was not met with similar success in the river-influenced shelf waters in the northern South China Sea Shelf-sea (NoSoCS) where riverine inputs, in which the relationship between the concentration of [N + N] and SST was not straight forward, are significant. By considering river-influenced shelf waters as a mixture of open ocean water and riverine inputs and then combining SST with the absorption coefficient of colored dissolved organic matter (CDOM) at 412 nm, ag(412), which serves as an indicator of the riverine influence, an algorithm has been developed for remotely sensing the surface concentration of [N + N] in the NoSoCS. This satellite-derived concentration of [N + N] was validated by direct observations. In 16 match-up comparisons within a time window of ±24 h and concentrations of [N + N] ranging between 0.2 and 74 μM, the uncertainty was ±40%. The climatological distributions of the derived concentration of [N + N] in the NoSoCS and surrounding waters between 2002 and 2014 are consistent with the reported distributions based on ship-board observations. Thus, as a result of riverine inputs, the concentration of [N + N] generally increases towards the coasts, varying by more than two orders of magnitude from about 0.5 μM and near zero in the open northern South China Sea (NSCS) in January and July respectively to about 50 and 100 μM at the mouth of the Pearl River. In the open NSCS where nutrient availability is controlled primarily by the enhanced winter convective overturn, the intra-annual variations in the concentration of [N + N] follow a distinct seasonal cycle, reaching a minimum close to zero in the summer and a maximum, 0.7 μM, in the winter. In the NoSoCS, as a result of the high riverine input of nutrients in the summer, in addition to the maximum in the winter, there is a secondary summer maximum, which becomes increasingly prominent towards the coast. This work represents a first attempt to characterize the distributions of the surface concentration of [N + N] in river-influenced shelf-seas from space. With appropriate regional tuning, a similar approach may be applicable to other river-influenced shelf-seas such as the Texas-Louisiana Shelf.

Behaviour of chromium isotopes in the eastern sub-tropical Atlantic Oxygen Minimum Zone

Constraints on the variability of chromium (Cr) isotopic compositions in the modern ocean are required to validate the use of Cr isotopic signatures in ancient authigenic marine sediments for reconstructing past levels of atmospheric and ocean oxygenation. This study presents dissolved Cr concentrations (CrT, where CrT = Cr(VI) + Cr(III)) and Cr isotope data (δ53Cr) for shelf, slope and open ocean waters within the oxygen minimum zone (OMZ) of the eastern sub-tropical Atlantic Ocean. Although dissolved oxygen concentrations were as low as 44–90 μmol kg−1 in the core of the OMZ, there was no evidence for removal of Cr(VI). Nonetheless, there was significant variability in seawater δ53Cr, with values ranging from 1.08 to 1.72‰. Shelf CrT concentrations were slightly lower (2.21 ± 0.07 nmol kg−1) than in open ocean waters at the same water depth (between 0 and 160 m, 2.48 ± 0.07 nmol kg−1). The shelf waters also had higher δ53Cr values (1.41 ± 0.14‰ compared to 1.18 ± 0.05‰ for open ocean waters shallower than 160 m). This is consistent with partial reduction of Cr(VI) to Cr(III), with subsequent removal of isotopically light Cr(III) onto biogenic particles. We also provide evidence for input of relatively isotopically heavy Cr from sediments on the shelf. Intermediate and deep water masses (AAIW and NADW) show a rather limited range of δ53Cr values (1.19 ± 0.09‰) and inputs of Cr from remineralisation of organic material or re-oxidation of Cr(III) appear to be minimal. Authigenic marine precipitates deposited in deep water in the open ocean therefore have the potential to faithfully record seawater δ53Cr, whereas archives of seawater δ53Cr derived from shelf sediments must be interpreted with caution.

Improved Chlorophyll-a Algorithm for the Satellite Ocean Color Data in the Northern Bering Sea and Southern Chukchi Sea

The Bering and Chukchi seas are an important conduit to the Arctic Ocean and are reported to be one of the most productive regions in the world’s oceans in terms of high primary productivity that sustains large numbers of fishes, marine mammals, and sea birds as well as benthic animals. Climate-induced changes in primary production and production at higher trophic levels also have been observed in the northern Bering and Chukchi seas. Satellite ocean color observations could enable the monitoring of relatively long term patterns in chlorophyll-a (Chl-a) concentrations that would serve as an indicator of phytoplankton biomass. The performance of existing global and regional Chl-a algorithms for satellite ocean color data was investigated in the northeastern Bering Sea and southern Chukchi Sea using in situ optical measurements from the Healy 2007 cruise. The model-derived Chl-a data using the previous Chl-a algorithms present striking uncertainties regarding Chl-a concentrations – for example, overestimation in lower Chl-a concentrations or systematic overestimation in the northeastern Bering Sea and southern Chukchi Sea. Accordingly, a simple two band ratio (Rrs(443)/Rrs(555)) algorithm of Chl-a for the satellite ocean color data was devised for the northeastern Bering Sea and southern Chukchi Sea. The MODIS-derived Chl-a data from July 2002 to December 2014 were produced using the new Chl-a algorithm to investigate the seasonal and interannual variations of Chl-a in the northern Bering Sea and the southern Chukchi Sea. The seasonal distribution of Chl-a shows that the highest (spring bloom) Chl-a concentrations are in May and the lowest are in July in the overall area. Chl-a concentrations relatively decreased in June, particularly in the open ocean waters of the Bering Sea. The Chl-a concentrations start to increase again in August and become quite high in September. In October, Chl-a concentrations decreased in the western area of the Study area and the Alaskan coastal waters. Strong interannual variations are shown in Chl-a concentrations in all areas. There is a slightly increasing trend in Chl-a concentrations in the northern Bering Strait (SECS). This increasing trend may be related to recent increases in the extent and duration of open waters due to the early break up of sea ice and the late formation of sea ice in the Chukchi Sea.

A modern robust approach to remotely estimate chlorophyll in coastal and inland zones

The chlorophyll concentration of a water body is an important proxy for representing the phytoplankton biomass. Its estimation from multi or hyper-spectral remote sensing data in natural waters is generally achieved by using (i) the waveband ratioing in two or more bands in the blue-green or (ii) by using a combination of the radiance peak position and magnitude in the red-near-infrared (NIR) spectrum. The blue-green ratio algorithms have been extensively used with satellite ocean color data to investigate chlorophyll distributions in open ocean and clear waters and the application of red-NIR algorithms is often restricted to turbid productive water bodies. These issues present the greatest obstacles to our ability to formulate a modern robust method suitable for quantitative assessments of the chlorophyll concentration in a diverse range of water types. The present study is focused to investigate the normalized water-leaving radiance spectra in the visible and NIR region and propose a robust algorithm (Generalized ABI, GABI algorithm) for chlorophyll concentration retrieval based on Algal Bloom index (ABI) which separates phytoplankton signals from other constituents in the water column. The GABI algorithm is validated using independent in-situ data from various regional to global waters and its performance is further evaluated by comparison with the blue-green waveband ratios and red-NIR algorithms. The results revealed that GABI yields significantly more accurate chlorophyll concentrations (with uncertainties less than 13.5%) and remains more stable in different waters types when compared with the blue-green waveband ratios and red-NIR algorithms. The performance of GABI is further demonstrated using HICO images from nearshore turbid productive waters and MERIS and MODIS-Aqua images from coastal and offshore waters of the Arabian Sea, Bay of Bengal and East China Sea.

Thallium dynamics in the southern North Sea

In open ocean waters thallium (Tl) belongs to the group of conservative elements, even though deviations from this trend have been observed in NW German coastal waters. Here, we report on tidal, seasonal and spatial dynamics of Tl along with Mo and Mn in the water column of a backbarrier tidal flat close to the island of Spiekeroog, the Jade system (Inner Jade and Jade Bay) and the adjacent offshore region. Dissolved thallium (Tldiss) displays strong tidal and seasonal variations (∼25–60 pM) unrelated to salinity. In all study areas, Tldiss clearly deviates from conservative behavior. In general, Tldiss is low during low tide (with a loss of up to 50%) and inversely related to Mndiss, except in summer. The tidal Tl variations as well as the loss of Tl in the water column may be due to Tl removal from pore waters in reducing sediments and drainage of Tl-free but Mn-rich pore waters into the water column during low tide. The negative Tl anomaly can be traced offshore for more than 40 km to the island of Helgoland.The redox chemistry of Tl is not well studied, and Tl removal from pore waters was previously suggested to only occur under anoxic/sulfidic conditions. By contrast, our preliminary pore water results suggest that Tl could be removed already under slightly reducing (suboxic) conditions, likely along with microbially induced Mn reduction in the sediments. Therefore, this study supports the biological involvement in the aqueous cycling of Tl. We propose the use of Tldiss next to Mndiss as valuable indicator of suboxic or anoxic pore water discharge to the coastal realm.

Methane and nitrous oxide distributions in coastal and open ocean waters of the Northeast Subarctic Pacific during 2015–2016

Abstract We measured depth profiles of CH 4 and N 2 O concentrations at six stations along a coastal - oceanic transect in the Northeastern Subarctic Pacific Ocean in winter, spring and summer of 2015 and 2016. In the offshore region, we observed mixed layer CH 4 concentrations that were close to atmospheric equilibrium with no evidence of a near-surface CH 4 maximum. Sub-surface waters of the oceanic region exhibited persistent CH 4 under-saturation, suggesting in situ biological consumption below the mixed layer. Methane concentrations in coastal waters were significantly more variable, with maximum super-saturation of up to 600% on the Vancouver Island shelf and slope, likely due to supply from seeps and gas hydrates. In both coastal and open ocean waters, upper water column concentrations of N 2 O were close to atmospheric equilibrium, while subsurface waters exhibited a strong N 2 O maximum coincident with the depth of the oxygen minimum at ~1000 m. The relationship between ∆N 2 O, N* and apparent oxygen utilization (AOU) revealed likely signatures of both nitrification and denitrification as N 2 O sources, suggesting a possible contribution of lateral advective supply. Sea-air fluxes for both N 2 O and CH 4 were low in the open ocean and increased towards the coast, with the highest values for N 2 O observed during the summer upwelling season. Our results provide new information on the distribution of CH 4 and N 2 O in the Northeast Subarctic Pacific, and the potential underlying mechanisms driving the production and consumption of these gases. Continued time-series measurements will provide valuable information on climate-driven changes in the biogeochemical cycling of CH 4 and N 2 O.

Light Absorption by Suspended Particles in the Red Sea: Effect of Phytoplankton Community Size Structure and Pigment Composition

AbstractThe light absorption properties of phytoplankton (aph(λ)) and nonalgal particles (anap(λ)) associated with phytoplankton pigments were analyzed across the Red Sea, in the upper 200 m depth, between October 2014 and August 2016. The contribution by nonalgal particles to the total particulate light absorption (aph(λ) + anap(λ)) was highly variable (23 ± 17% at 440 nm) and no relationship between anap(440) and chlorophyllaconcentration, [TChla], was observed. Phytoplankton‐specific phytoplankton absorption coefficients at 440 and 676 nm for a given [TChla], aph*(440), and(676) were slightly higher than those derived from average relationships for open ocean waters within the surface layer as well as along the water column. Variations in the concentration of photosynthetic and photoprotective pigments were noticeable by changes in phytoplankton community size structure as well as in(λ). This study revealed that a higher proportion of picophytoplankton and an increase in photoprotective pigments (mainly driven by zeaxanthin) tended to be responsible for the higher(λ) values found in the Red Sea as compared to other oligotrophic regions with similar [TChla]. Understanding this variability across the Red Sea may help improve the accuracy of biogeochemical parameters, such as [TChla], derived from in situ measurements and ocean color remote sensing at a regional scale.

Acoustically Measured Distribution and Abundance of Atlantic Menhaden (Brevoortia tyrannus) in a Shallow Estuary in Long Island, NY

Atlantic menhaden (Brevoortia tyrannus) is an euryhaline forage fish abundant along the eastern coast of the USA that seasonally migrates between the open ocean and shallow water estuaries. These fish are known for forming large, dense schools and are important prey for piscivorous fish, seabirds. Following several large fish kills in the late spring of 2015 in the western Peconic Estuary in Long Island, New York, we conducted multiple surveys during the spring, summer, and fall using scientific echosounders to quantify menhaden abundance in this region. Acoustic backscatter data were used to estimate numeric abundance and biomass of menhaden for the western Peconic Estuary. We found that the 2015 fish kills represented between 7 and 18% of the total local population (~ 2.4 million) that were present at the time. Significant changes in target strength distributions during the study suggest that the size classes of menhaden present in the estuary change as fish grow or migrate in and out of the estuary. This study demonstrates that vertical beam active acoustics is a viable method for quantifying forage fish in a very shallow (< 4 m depth) estuary.

Airborne and shipborne polarimetric measurements over open ocean and coastal waters: Intercomparisons and implications for spaceborne observations

Comprehensive polarimetric closure is demonstrated using observations from two in-situ polarimeters and Vector Radiative Transfer (VRT) modeling. During the Ship-Aircraft Bio-Optical Research (SABOR) campaign, the novel CCNY HyperSAS-POL polarimeter was mounted on the bow of the R/V Endeavor and acquired hyperspectral measurements from just above the surface of the ocean, while the NASA GISS Research Scanning Polarimeter was deployed onboard the NASA LaRC's King Air UC-12B aircraft. State-of-the-art, ancillary measurements were used to characterize the atmospheric and marine contributions in the VRT model, including those of the High Spectral Resolution Lidar (HSRL), the AErosol RObotic NETwork for Ocean Color (AERONET-OC), a profiling WETLabs ac-9 spectrometer and the Multi-spectral Volume Scattering Meter (MVSM). An open-ocean and a coastal scene are analyzed, both affected by complex aerosol conditions. In each of the two cases, it is found that the model is able to accurately reproduce the Stokes components measured simultaneously by each polarimeter at different geometries and viewing altitudes. These results are mostly encouraging, considering the different deployment strategies of RSP and HyperSAS-POL, which imply very different sensitivities to the atmospheric and ocean contributions, and open new opportunities in above-water polarimetric measurements. Furthermore, the signal originating from each scene was propagated to the top of the atmosphere to explore the sensitivity of polarimetric spaceborne observations to changes in the water type. As expected, adding polarization as a measurement capability benefits the detection of such changes, reinforcing the merits of the full-Stokes treatment in modeling the impact of atmospheric and oceanic constituents on remote sensing observations.

Beneath the waves, oxygen disappears

Oceans As plastic waste pollutes the oceans and fish stocks decline, unseen below the surface another problem grows: deoxygenation. Breitburg et al. review the evidence for the downward trajectory of oxygen levels in increasing areas of the open ocean and coastal waters. Rising nutrient loads

Declining oxygen in the global ocean and coastal waters.

Oxygen is fundamental to life. Not only is it essential for the survival of individual animals, but it regulates global cycles of major nutrients and carbon. The oxygen content of the open ocean and coastal waters has been declining for at least the past half-century, largely because of human activities that have increased global temperatures and nutrients discharged to coastal waters. These changes have accelerated consumption of oxygen by microbial respiration, reduced solubility of oxygen in water, and reduced the rate of oxygen resupply from the atmosphere to the ocean interior, with a wide range of biological and ecological consequences. Further research is needed to understand and predict long-term, global- and regional-scale oxygen changes and their effects on marine and estuarine fisheries and ecosystems.