Number Of Fungal Species Research Articles

Investigation and research on fungal diversity of Platycladi Semen on Chinese market

In the process of harvesting, production and processing, storage, and transportation, the traditional Chinese medicine Platycladi Semen is prone to mildew due to its own and environmental factors, which can nourish the production of toxic or pathogenic fungi, and even produce mycotoxins, which affects the safety of clinical medication. The 2020 edition of Chinese Pharmacopoeia limits the highest standard of aflatoxin content in Platycladi Semen. However, there are few studies on the fungal contamination of Platycladi Semen, and it is difficult to prevent and control it in a targeted manner. Therefore, based on the Illumina NovaSeq6000 platform, this article uses ITS sequence amplicon technology to analyze the distribution and diversity of fungi in 27 batches of commercially available Platycladi Semen in the Chinese market. A total of 10 phyla, 35 classes, 93 orders, 193 families, 336 genera, and 372 species of fungi were identified in China. Among them, Aspergillus, Alternaria spp. were dominant, 20 batches of samples were detected for A. flavus, 10 batches of samples were detected for A. nidulans, and all samples were detected for potential pathogenic fungi such as A. fumigatus and A. niger. According to diversity analysis, the diversity of the fungal communities in the samples from Gansu province was high, the samples in Shandong province contain the largest number of fungal species, and the samples in Guangxi province had the lo-west diversity and the least number of species. In most samples, pathogenic fungi such as A. fumigatus, A. niger, A. flavus, A. parasiticus were detected in varying degrees. This study systematically investigated the fungal contamination of Platycladi Semen from the markets in the last link of the its industrial chain, and clarified the distribution of Platycladi Semen fungi, especially toxin-producing fungi, and provided theoretical basis for the targeted prevention and control of fungal contamination in Platycladi Semen.

Diversity and distribution of microfungi in foliage leaf, bark and leaf litter of Couroupita guianensis

The diversity and distribution of micro fungal assemblages in the foliage leaf, bark and leaf litter tissues of the Couroupita guianensis sacred plant. For the host, we recorded 1005 fungal species isolates from 900 tissue segments. A total of 62 fungal species were isolated from foliar endophytes, phellophytes and leaf litter. The colonization frequency of the fungi species has been recorded as 111.66% from the endophytes, phellophytes and leaf tissues. The fungi species recovered in various groups included ascomycetes, coelomycetes, hyphomycetes, zygomycetes and sterile fungi. The number of fungal species is increased for the plant tissues, it showed that the species diversity is increasing. A correspondence analysis also showed that the fungal species assemblages were different from each type of tissue.

Substrate specialization and distribution of fungi of the genus <i>Trametes</i> in the southeast of Western Siberia

The authors have studied the features of the substrate specificity of fungi of the genus Trametes s.l. in the southeast of Western Siberia, where this taxon has 10 species. Most species of fungi have a wide substrate spectrum, represented by the wood of various types of woody plants. Fungal species with a wide distribution and a high frequency of occurrence develop a wide range of substrates. Fungal species that are rare and common only in some localities are not numerous; they are characterized by a narrow substrate spectrum. Most species of fungi develop on hardwood, but only a few species can grow on coniferous wood in mountainous areas. Fungal substrates are represented by wood of sixteen species of angiosperms and one species of gymnosperms of woody plants. These ten species of fungi of the Trametes genus have been identified in natural plant communities in the southeast of Western Siberia, while only eight species have been found in anthropogenic habitats. The largest number of fungal species develops on large-sized tree species found in plant communities that are common in the studied region. The number of species of wood-decay fungi on shrubs is insignificant. A small range of species of wood-decay fungi is typical of introduced species (Linden, Oak, Manchurian Walnut, Apple, Ash, Mulberry) growing in urban plantings and in Botanical gardens. Species of fungi with a wide ecological amplitude can develop on the wood of introduced plants.

Soil Fungal Community Responses to the Silver Nanoparticles Contamination as Assessed by Illumina Next Generation Sequencing (NGS)

The increasing use of silver nanoparticles (AgNPs) due to its excellent antimicrobial activity in commercial products prompting concerns about their fate in the environment. The toxicity of AgNPs is mainly the result of Ag+ ions. In this study, soil was experimentally contaminated with 100 mg kg-1 of AgNO3 to investigate its effect on fungal soil community. Deoxyribonucleic acid (DNA) from the soil was extracted at the 6th, 12th, and 24th month of observation and assessed by Illumina Next Generation Sequencing (NGS). The results show that, the pollutant change fungal community in soil. After 12 months incubated the number of fungal species in the soil reduced significantly and 40% of the community was dominated by one species.

The role of vegetative cell fusions in the development and asexual reproduction of the wheat fungal pathogen Zymoseptoria tritici

BackgroundThe ability of fungal cells to undergo cell-to-cell communication and anastomosis, the process of vegetative hyphal fusion, allows them to maximize their overall fitness. Previous studies in a number of fungal species have identified the requirement of several signaling pathways for anastomosis, including the so far best characterized soft (So) gene, and the MAPK pathway components MAK-1 and MAK-2 of Neurospora crassa. Despite the observations of hyphal fusions’ involvement in pathogenicity and host adhesion, the connection between cell fusion and fungal lifestyles is still unclear. Here, we address the role of anastomosis in fungal development and asexual reproduction in Zymoseptoria tritici, the most important fungal pathogen of wheat in Europe.ResultsWe show that Z. tritici undergoes self-fusion between distinct cellular structures, and its mechanism is dependent on the initial cell density. Contrary to other fungi, cell fusion in Z. tritici only resulted in cytoplasmic mixing but not in multinucleated cell formation. The deletion of the So orthologous ZtSof1 disrupted cell-to-cell communication affecting both hyphal and germling fusion. We show that Z. tritici mutants for MAPK-encoding ZtSlt2 (orthologous to MAK-1) and ZtFus3 (orthologous to MAK-2) genes also failed to undergo anastomosis, demonstrating the functional conservation of this signaling mechanism across species. Additionally, the ΔZtSof1 mutant was severely impaired in melanization, suggesting that the So gene function is related to melanization. Finally, we demonstrated that anastomosis is dispensable for pathogenicity, but essential for the pycnidium development, and its absence abolishes the asexual reproduction of Z. tritici.ConclusionsWe demonstrate the role for ZtSof1, ZtSlt2, and ZtFus3 in cell fusions of Z. tritici. Cell fusions are essential for different aspects of the Z. tritici biology, and the ZtSof1 gene is a potential target to control septoria tritici blotch (STB) disease.

Fairy rings harbor distinct soil fungal communities and high fungal diversity in a montane grassland

Abstract Increasing numbers of fungal species have been described recently from semi-natural grassland soils, raising the conservation interest of these species-rich habitats. Here, we characterize the soil fungal community inhabiting six fairy rings in a montane grassland of the Eastern Pre-Pyrenees through fungal DNA metabarcoding of ITS2 amplicons. Distinct soil fungal communities were observed outside of the rings compared to inside the ring areas. Higher abundances of fungi belonging to Pleosporales and Eurotiales were observed outside fairy rings, whereas zones belonging to the fairy rings showed higher abundances of Agaricales. Fungal diversity was higher inside the rings than outside. We found diverse saprotrophic or putative saprotrophic taxa associated with the studied rings, including the genera Clavaria, Psathyrella, Tricholoma, Amanita and Lycoperdon. These findings highlight the importance of particular keystone taxa in the structuring of fungal communities and their effect on the overall grassland fungal community.

Survey and Identification of Date Palm Pathogens and Indigenous Biocontrol Agents.

Fungal diseases are considered a major threat to plant growth and productivity. However, some beneficial fungi growing in the same environment protect plants from various pathogens, either by secreting antifungal metabolites or by stimulating the host immune defense mechanism. Date palms are susceptible to several fungal pathogens. Nevertheless, information on the pathogenic fungal distribution in date palm fields across different seasons is limited, especially that from Qatar. Therefore, the current study's aim was to evaluate the pathogenic and beneficial fungal diversity and distribution, including the endophytic fungi from the date palm tissues and root-associated soil fungi, during different seasons, for the identification of indigenous biocontrol agents. Our results showed that the highest number of fungal species was isolated in fall and spring, and pathogenic fungi were isolated mainly in spring. This is the first report that in Qatar, Neodeightonia phoenicum and Thielaviopsis punctulata cause date palm root rot disease, Fusarium brachygibbosum and Fusarium equiseti cause date palm wilting, and N. phoenicum causes diplodia disease in date palm offshoots. The combinations of the fungi that did not frequently occur together in date palm rhizosphere soil were investigated to identify indigenous biocontrol agents. Based on the results, we determined that Trichoderma harzianum and Trichoderma longibrachiatum are effective antagonistic fungi against T. punctulata, N. phoenicum, F. brachygibbosum, and Fusarium solani, qualifying them as potential biocontrol agents. Antagonistic activity of endophytic fungi against the pathogens was tested; except for Ulocladium chartarum, no endophytic fungi showed antagonistic activity against the tested pathogens.[Formula: see text] Copyright © 2020 The Author(s). This is an open access article distributed under the CC BY 4.0 International license.

Chicken Intestinal Mycobiome: Initial Characterization and Its Response to Bacitracin Methylene Disalicylate.

The gastrointestinal (GI) tract harbors a diverse population of microorganisms. While much work has been focused on the characterization of the bacterial community, very little is known about the fungal community, or mycobiota, in different animal species and chickens in particular. Here, we characterized the biogeography of the mycobiota along the GI tract of day 28 broiler chicks and further examined its possible shift in response to bacitracin methylene disalicylate (BMD), a commonly used in-feed antibiotic, through Illumina sequencing of the internal transcribed spacer 2 (ITS2) region of fungal rRNA genes. Out of 124 samples sequenced, we identified a total of 468 unique fungal features that belong to four phyla and 125 genera in the GI tract. Ascomycota and Basidiomycota represented 90% to 99% of the intestinal mycobiota, with three genera, i.e., Microascus, Trichosporon, and Aspergillus, accounting for over 80% of the total fungal population in most GI segments. Furthermore, these fungal genera were dominated by Scopulariopsis brevicaulis (Scopulariopsis is the anamorph form of Microascus), Trichosporon asahii, and two Aspergillus species. We also revealed that the mycobiota are more diverse in the upper than lower GI tract. The cecal mycobiota transitioned from being S. brevicaulis dominant on day 14 to T. asahii dominant on day 28. Furthermore, 2-week feeding of 55 mg/kg BMD tended to reduce the cecal mycobiota α-diversity. Taken together, we provided a comprehensive biogeographic view and succession pattern of the chicken intestinal mycobiota and its influence by BMD. A better understanding of intestinal mycobiota may lead to the development of novel strategies to improve animal health and productivity.IMPORTANCE The intestinal microbiota is critical to host physiology, metabolism, and health. However, the fungal community has been often overlooked. Recent studies in humans have highlighted the importance of the mycobiota in obesity and disease, making it imperative that we increase our understanding of the fungal community. The significance of this study is that we revealed the spatial and temporal changes of the mycobiota in the GI tract of the chicken, a nonmammalian species. To our surprise, the chicken intestinal mycobiota is dominated by a limited number of fungal species, in contrast to the presence of hundreds of bacterial taxa in the bacteriome. Additionally, the chicken intestinal fungal community is more diverse in the upper than the lower GI tract, while the bacterial community shows an opposite pattern. Collectively, this study lays an important foundation for future work on the chicken intestinal mycobiome and its possible manipulation to enhance animal performance and disease resistance.

Antimicrobial and antioxidant activities and chemical profiling of Curvularia tsudae endophytic in Cynodon dactylon (L.) Pers.

There is a growing body of evidence that endophytic fungal metabolites possess important biological activities. Cynodon dactylon (L.) Pers., a well-known grass species with potential medicinal properties, is under-explored for the diversity of endophytic fungal species and their metabolites. We report here the diversity of endophytic fungi in the culm, leaf and inflorescence of Cynodon dactylon when cultured on moist blotter (MB), potato dextrose agar (PDA) and malt extract agar (MEA). Species richness, Shannon and Simpson diversity and evenness indices showed that PDA followed by MEA supported the growth of the largest number of fungal species. Amongst four fungal species tested, Curvularia tsudae was selected for further studies on antimicrobial and antioxidant activities. The mycelial mat (MM) and culture filtrate (CF) of PD broth grown Curvularia tsudae extracted with ethyl acetate and methanol, respectively, were subjected to antimicrobial assay against five bacterial and four fungal test isolates. Results indicated that the ethyl acetate extract of CF had moderate activity against Enterococcus faecalis, Escherichia coli, Pseudomonas fluorescence and Staphylococcus aureus whereas the methanolic MM extract showed high to moderate activity to Aspergillus flavus, A. niger and Fusarium oxysporum. Cyclic voltammetric analysis of ethyl acetate extract showed very good antioxidant activity and the extract contained coumarins when determined by HPLC. High-resolution orbitrap LC-MS of ethyl acetate extract revealed the presence of metabolites with antimicrobial and antioxidant and other biological activities. Finding of the present study suggested that Curvularia tsudae could be exploited for pharmaceutical applications.

Quantifying the sharing of foliar fungal pathogens by the invasive plant Ageratina adenophora and its neighbours.

Local pathogens can accumulate as asymptomatic endophytes, making it difficult to detect the impacts of invasive species as propagators of disease in the invaded range. We used the invasive plant Ageratina adenophora to assess such accumulation. We intensively collected foliar fungal endophytes and leaf spot pathogens of A.adenophora and co-occurring neighbours and performed an inoculation experiment to evaluate their pathogenicity and host range. Ageratina adenophora harboured diverse necrotrophic pathogens; its communities of endophytes and leaf spot pathogens were different in composition and shared only a small number of fungal species. In the pathogen communities of local plant hosts, 21% of the operational taxonomic units (OTUs), representing 50% of strains, also occurred as leaf spot pathogens and/or endophytes of A.adenophora. The local pathogen community was more similar to the endophytes than to the pathogens of A.adenophora. The inoculation experiment showed that local pathogens could infect A.adenophora leaves asymptomatically and that local plant hosts were susceptible to both A.adenophora endophytes and pathogens. Ageratina adenophora is a highly competent host for local pathogens, and its asymptomatic latent pathogens are fungi primarily shared with local neighbours. This poses challenges for understanding the long-term ecological consequences of plant invasion.

The effect of Frankia and multiple ectomycorrhizal fungil species on Alnus growing in low fertility soil

Plant interactions with single symbionts of nitrogen fixing bacteria or mycorrhizal fungi are well studied. However, less is known about how plants interact with multiple symbiont species. The aim of this study was to assess whether multiple symbionts had a synergistic effect on host plant performance compared with a single symbiont and whether increasing the number of non-specific fungal species would increase plant performance due to niche complementarity. Green alder (Alnus viridis ssp. crispa) were inoculated with non-specific ectomycorrhizal fungi (Lactarius torminosus, Lactarius theiogalus, Hebeloma crustuliniforme) alone or in combination, with and without Frankia, and grown in nutrient-poor soil. Frankia significantly increased plant growth by 48.5%, doubled the proportion of plants forming ectomycorrhizae, as well as increased root extracellular phosphatase activity by 8.8% compared to non-Frankia treatments. However, increasing number of fungal species decreased nodulated plant biomass. Plants that formed a Hartig net had reduced nodule number and nodule biomass allocation, as well as total nodule activity compared with plants with no Hartig net. Our results indicated that Frankia inoculation provided benefit for both host plants and ectomycorrhizal fungi in the nutrient-poor soil, while ectomycorrhizal fungi did not. These negative effects of mycorrhizal fungi are likely dependent on soil nutrient P availability.

Genomic characterization of Parengyodontium americanum sp. nov

Modern genome analysis and phylogenomic methods have increased the number of fungal species, as well as enhanced appreciation of the degree of diversity within the fungal kingdom. In this context, we describe a new Parengyodontium species, P. americanum, which is phylogenetically related to the opportunistic human fungal pathogen P. album. Five unusual fungal isolates were recovered from five unique and confirmed coccidioidomycosis patients, and these isolates were subsequently submitted to detailed molecular and morphological identification procedures to determine identity. Molecular and morphological diagnostic analyses showed that the isolates belong to the Cordycipitaceae. Subsequently, three representative genomes were sequenced and annotated, and a new species, P. americanum, was identified. Using various genomic analyses, gene family expansions related to novel compounds and potential for ability to grow in diverse habitats are predicted. A general description of the genomic composition of this newly described species and comparison of genome content with Beauveria bassiana, Isaria fumosorosea and Cordyceps militaris shows a shared core genome of 6371 genes, and 148 genes that appear to be specific for P. americanum. This work provides the framework for future investigations of this interesting fungal species.

Variation in Soil Fungal Composition Associated with the Invasion of Stellera chamaejasme L. in Qinghai-Tibet Plateau Grassland.

Stellera chamaejasme L. is the most problematic weed in China’s grasslands. Its root exudates affect co-occurring plants and thus may also affect soil fungi. Soils (0–20 cm depth) on two adjacent sites, one invaded the other uninvaded, were compared for a range of physiochemical parameters and by DNA sequencing of fungal communities. At the invaded site, relationships between S. chamaejasme abundance, soil physiochemical factors, and fungal communities were further investigated to determine whether these relationships corroborated conclusions on the basis of site differences that could be translated into functional variation. Results showed that the invaded soils had lower N, P, organic matter, fungal alpha diversity, and relative abundance of arbuscular mycorrhizal fungi (AMF), but greater abundance of pathogenic fungi. Organic matter and P were the edaphic factors most strongly linked to site differences in total fungal communities. Within the invaded site, organic matter rather than S. chamaejasme cover was closely linked to total fungal composition. However, on this site, a number of fungal species that had various ecological functions and that differentiated the two sites were related to S. chamaejasme cover. This study indicates that lower fertility soils may be more susceptible to invasion by S. chamaejasme. Although the influence of S. chamaejasme on total fungal community composition was limited, there was evidence of effects on particular fungal species. Further research is needed to determine whether these effects influence S. chamaejasme invasiveness.

Linking Soil Fungal Generality to Tree Richness in Young Subtropical Chinese Forests.

Soil fungi are a highly diverse group of microorganisms that provide many ecosystem services. The mechanisms of soil fungal community assembly must therefore be understood to reliably predict how global changes such as climate warming and biodiversity loss will affect ecosystem functioning. To this end, we assessed fungal communities in experimental subtropical forests by pyrosequencing of the internal transcribed spacer 2 (ITS2) region, and constructed tree-fungal bipartite networks based on the co-occurrence of fungal operational taxonomic units (OTUs) and tree species. The characteristics of the networks and the observed degree of fungal specialization were then analyzed in relation to the level of tree species diversity. Unexpectedly, plots containing two tree species had higher network connectance and fungal generality values than those with higher tree diversity. Most of the frequent fungal OTUs were saprotrophs. The degree of fungal specialization was highest in tree monocultures. Ectomycorrhizal fungi had higher specialization coefficients than saprotrophic, arbuscular mycorrhizal, and plant pathogenic fungi. High tree species diversity plots with 4 to 16 different tree species sustained the greatest number of fungal species, which is assumed to be beneficial for ecosystem services because it leads to more effective resource exploitation and greater resilience due to functional redundancy.

EXAMINATION OF FUNGAL DIVERSITY PRESENT ON MEXICAN FREE-TAILED BATS, TADARIDA BRASILIENSIS MEXICANA, IN COLORADO

We surveyed a summer population of Tadarida brasiliensis mexicana in south-central Colorado to gain an initial characterization of the resident mycobiome (i.e., fungal biota) present on their body surfaces. We cultured fungal spores from bats captured in early and late summer and then conducted DNA barcoding analysis for taxonomic identification. Phylum Ascomycota dominated the ectomycotal (i.e., fungi present on body surfaces) community, with the most common genera including Aspergillus, Penicillium, Cladosporium, and Eurotium. Phylum Basidiomycota constituted a smaller proportion of fungal isolates and was composed primarily of Cryptococcus, Peniophora, Cystofilobasidium, and Sistotrema. We found seasonal differences in fungal community composition, with diversity and evenness increasing from June to August. There were notable differences in fungal communities present on adult vs. juvenile bats, with juveniles having a greater number of unique genera, greater fungal diversity, and lower species evenness compared with adults. We isolated a number of fungal species that are capable of growing at low temperatures, indicating that T. b. mexicana harbors viable psychrophilic fungi.

Bio Correction of Enzymatic and Microbial Processes in Rumen and Intermediary Metabolism in Sheep with the Use of Antioxidant and Organic Iodine Dietary Supplements

Dihydroquercetin, the antioxidant added to the sheep diet either alone or in combination with organic iodine had a significant effect on the rumen enzymatic and microbiological processes, the intermediary metabolism, and the sheep’s resistance. Under the effect of dihydroquercetin in combination with the organic iodine, insignificant increases in the chyme’s pH, the advanced oxidation processes, the elevated level of ammonia, and the greater number of microorganisms in the rumen were recorded generally due to infuzoria. In case of adding dihydroquercetin alone, the chyme’s pH normalized, its oxidation lowered, the reduction processes intensified, and the microorganism number increased due to infuzoria and bacteria. Some decreases in the chyme concentrations of volatile fatty acids and ammonia were simultaneously observed. The feed additives had a significant impact on the rumen microbiota. Under the effect of dihydroquercetin in combination with the organic iodine, the numbers of lactobacilli and mesophilic aerobic and facultatively anaerobic microorganisms (MAFAnM) in the rumen content increased tenfold and fourfold, respectively, while the rumen lactose-positive strains and fungal species, including the fungi of the genus Candida, the molds, and the yeasts, decreased by 98.9 and 65.3%, respectively. In case of adding dihydroquercetin alone, the numbers of lactobacilli and MAFAnM increased 11.5-fold and 21-fold, respectively, while the lactose-positive strains decreased by 92.2%. The numbers of fungal species, including fungi, molds, and yeasts, increased 2.2-fold. Under the effect of dihydroquercetin in combination with the organic iodine, the serum globulin concentrations increased, while the levels of triglycerides and bilirubin and the ALT and AST activities lowered in the sheep blood. In case of adding dihydroquercetin alone, the increases in serum albumin concentration, together with the globulin concentrations, were recorded. Therefore, the albumin-globulin ratio comprised 0.99. The levels of triglycerides and bilirubin and the ALT and AST activities also lowered. Dihydroquercetin in combination with the organic iodine and alone lowered the white blood cell count by 22.7 and 27.1%, respectively, increased the red blood cell count by 13.9 and 16.5%, respectively, and elevated the hematocrit level, indicating the sheep’s health improvements.

CHANGES IN MICROBIAL COMMUNITIES IN PRIMARY SOIL AND GROUND UNDER THE ANTHROPOGENIC INFLUENCE ON THE TERRITORY AROUND ANTARCTIC STATION “MIRNY”

Antarctic station “Mirny” was the first Russian (Soviet) polar station in Antarctica. The anthropogenic impact on the primary ground and soil in the area around of this polar station took place more than 60 years. This is reflected in both the chemical composition of the soil and microbial communities. The article shows multiple increasing of the number of bacteria and microscopic fungi in anthropogenic contaminated soils. Contamination of soil leads to changes of the structure of the microbial community. An increasing proportion of mesophilic bacteria isolates (90%) was shown. The increasing share spores and reduced the proportion of microscopic fungi mycelia were observed. Statistical analysis showed that we have identified almost all of the expected species that live in anthropogenic substrates (42 species), as well as in the control soils (17 species). But we identified only a part of fungal diversity in contaminated soils (32 species). The increase in the number of fungal species in the area of the polar station “Mirny” was proved to be connected with the human activity and introduction of new species. Native species of microscopic fungi were found to be able to colonize new materials previously unavailable to them. They also can be agents of active biodegradation of anthropogenic materials. Among fungal species isolated from anthropogenic contaminated soil and anthropogenic substrates more than 80% can be attributed to opportunistic organisms. Therefore the total number of microorganisms (CFU), the structure of the microbial complexes, the species composition of communities, indicator species, morphology and volume of biomass can be considered as an index of changes in soil microbial complexes and primary soils

Isolation and identification of native degrading fungi from Wastewater's pollutants in cardboard recycling industry

Introduction: By increasing the amount and diversity of bio-environmental wastewater pollutants, it is essential to be controlled and planed the environmental contaminants to eliminate or minimize. Cardboard recycling industry wastewater has the potential of environmental pollution; it is contaminated with various fungal species that may be effective in the decomposition and removal of pollutants. The aim of this study was the isolation and identification of native fungal species that decontaminate organic pollutants in the cardboard recycling industry wastewaters. Methods: In this study, which is a descriptive study, samples were randomly taken from different area of wastewater of cardboard recycling industry. Samples were cultured on Saboraud dextrose agar medium for isolation of probable fungal species, which decomposers of wastewater. The isolated fungal colonies were enumerated and purified based on morphological characteristics and microscopic analyzing as far as possible. Results: The average count of the total number of fungi species in wastewater of cardboard recycling industry was 2.5×102 CFU/ml of these 2.1×101 were saprophytic fungi. The most prevalent fungal species were identificated from the wastewater include Aspergillus niger, Aspergillus flavus, Penicillum, Geotrichum, Mucor, Drechselera, Paecillomyces, Alternaria, Fusarium and Absidia. The highest frequency of fungal species Aspergillus nige, Aspergillus flavus and Penicillum were 30.89%, 22.76% and 14.63% respectively. Conclusion: It seems that native fungi isolated from the cardboard recycling industry wastewater in this study are from fungi that have the potential for bioremediation of wastewater contaminants based on scientific literature and can be used for evaluating of their ability to decompose wastewater from this industry.

Fungi in the Marine Environment: Open Questions and Unsolved Problems.

Terrestrial fungi play critical roles in nutrient cycling and food webs and can shape macroorganism communities as parasites and mutualists. Although estimates for the number of fungal species on the planet range from 1.5 to over 5 million, likely fewer than 10% of fungi have been identified so far. To date, a relatively small percentage of described species are associated with marine environments, with ∼1,100 species retrieved exclusively from the marine environment. Nevertheless, fungi have been found in nearly every marine habitat explored, from the surface of the ocean to kilometers below ocean sediments. Fungi are hypothesized to contribute to phytoplankton population cycles and the biological carbon pump and are active in the chemistry of marine sediments. Many fungi have been identified as commensals or pathogens of marine animals (e.g., corals and sponges), plants, and algae. Despite their varied roles, remarkably little is known about the diversity of this major branch of eukaryotic life in marine ecosystems or their ecological functions. This perspective emerges from a Marine Fungi Workshop held in May 2018 at the Marine Biological Laboratory in Woods Hole, MA. We present the state of knowledge as well as the multitude of open questions regarding the diversity and function of fungi in the marine biosphere and geochemical cycles.

Searching for Bacteria in Neural Tissue From Amyotrophic Lateral Sclerosis.

Despite great efforts in the investigation, the exact etiology of amyotrophic lateral sclerosis (ALS) is a matter of intensive research. We recently advanced the idea that ALS might be caused by fungal infection. Indeed, fungal yeast and hyphal structures can be directly visualized in neural tissue of ALS patients, and a number of fungal species have been identified in the central nervous system (CNS). In the present work, we tested the possibility that bacterial infections can accompany these mycoses. Our findings establish the presence of bacterial DNA in different regions of the CNS from all ALS patients examined. Specifically, we used PCR and next generation sequencing (NGS) to precisely determine the bacterial species present in ALS tissue. Consistent with these findings, immunohistochemistry analysis of CNS sections using specific anti-bacterial antibodies identified prokaryotic cells in neural tissue. Finally, we assayed for the repeat expansion of the hexanucleotide repeat GGGGCC in C9orf72, which is considered the most common genetic cause of ALS in patients, using DNA extracted from ALS CNS tissue. We failed to find this repeated sequence in any of the eleven patients analyzed. Our results indicate that bacterial DNA and prokaryotic cells are present in CNS tissue, leading to the concept that both fungal and bacterial infections coexist in patients with ALS. These observations lay the groundwork for the use of appropriate therapies to eradicate the polymicrobial infections in ALS.