The problem of separating multicomponent micro-Doppler (m-D) signals is common in the field of radar signal processing. In some implementations, it is necessary to separate the multicomponent m-D signal that contains missing samples. To address this issue, an optimization model has been developed to recover and decompose multicomponent m-D signals with missing samples. To solve the underlying optimization problem, a two-algorithm-based alternate iteration framework is proposed. This method uses three techniques—the null space property, ridge regression method, and matching pursuit principle—to estimate the individual component, complex-valued differential operator, and regularization parameter. Finally, as shown by both simulation and measured data processing results, the proposed method can accurately separate the multicomponent m-D signal from incomplete data.