Network Analysis Of Functional Connectivity Research Articles

Electroencephalogram Functional Connectivity Analysis and Classification of Mental Arithmetic Working Memory Task

Analyzing brain activity during mental arithmetic tasks provides insight into psychological disorders such as ADHD, dyscalculia, and autism. While most research is conducted on the static functional connectivity of the brain while performing a cognitive task, the dynamic changes of the brain, which provide meaningful information for diagnosing individual differences in cognitive tasks, are often ignored. This paper aims to classify electroencephalogram (EEG) signals for rest vs. mental arithmetic task performance, using Bayesian functional connectivity features in the sensor space as inputs into a graph convolutional network. The subject-specific (intrasubject) classification performed on 36 subjects for rest vs. mental arithmetic task performance achieved the highest subject-specific classification accuracy of 98% and an average accuracy of 91% in the beta frequency band, outperforming state-of-the-art methods. In addition, statistical analysis confirms the consistency of Bayesian functional connectivity features compared to traditional functional connectivity features. Furthermore, the graph-theoretical analysis of functional connectivity networks reveals that good-performance subjects had higher global efficiency, betweenness centrality, and closeness centrality than bad-performance subjects. The ablation study on the classification of three cognitive states (subtraction, music, and memory) achieved a classification accuracy of 97%, and visual working memory (n-back task) achieved a classification accuracy of 94%, confirming the consistency and reliability of the proposed methodology.

LCGNet: Local Sequential Feature Coupling Global Representation Learning for Functional Connectivity Network Analysis with fMRI.

Analysis of functional connectivity networks (FCNs) derived from resting-state functional magnetic resonance imaging (rs-fMRI) has greatly advanced our understanding of brain diseases, including Alzheimer's disease (AD) and attention deficit hyperactivity disorder (ADHD). Advanced machine learning techniques, such as convolutional neural networks (CNNs), have been used to learn high-level feature representations of FCNs for automated brain disease classification. Even though convolution operations in CNNs are good at extracting local properties of FCNs, they generally cannot well capture global temporal representations of FCNs. Recently, the transformer technique has demonstrated remarkable performance in various tasks, which is attributed to its effective self-attention mechanism in capturing the global temporal feature representations. However, it cannot effectively model the local network characteristics of FCNs. To this end, in this paper, we propose a novel network structure for Local sequential feature Coupling Global representation learning (LCGNet) to take advantage of convolutional operations and self-attention mechanisms for enhanced FCN representation learning. Specifically, we first build a dynamic FCN for each subject using an overlapped sliding window approach. We then construct three sequential components (i.e., edge-to-vertex layer, vertex-to-network layer, and network-to-temporality layer) with a dual backbone branch of CNN and transformer to extract and couple from local to global topological information of brain networks. Experimental results on two real datasets (i.e., ADNI and ADHD-200) with rs-fMRI data show the superiority of our LCGNet.

Small-world EEG network analysis of functional connectivity in developmental dyslexia after visual training intervention.

Aberrations in functional connectivity in children with developmental dyslexia have been found in electroencephalographic studies using graph analysis. How training with visual tasks can modify the functional semantic network in developmental dyslexia remains unclear. We investigate local and global topological properties of functional networks in multiple EEG frequency ranges based on a small-world propensity method in controls, pre- and post-training dyslexic children during visual word/pseudoword processing. Results indicated that the EEG network topology in dyslexics before the training was more integrated than controls, and after training - more segregated and similar to that of the controls in the theta (θ: 4-8), alpha (α: 8-13), beta (β1: 13-20; β2: 20-30), and gamma (γ1: 30-48; γ2: 52-70 Hz) bands for three graph measures. The pre-training dyslexics exhibited a reduced strength and betweenness centrality of the left anterior temporal and parietal regions in the θ, α, β1 and γ1-frequency bands, compared to the controls. The simultaneous appearance of hubs in the left hemisphere (or both hemispheres) at temporal and parietal (α-word/γ-pseudoword discrimination), temporal and middle frontal cortex (θ, α-word), parietal and middle frontal cortex (β1-word), parietal and occipitotemporal cortices (θ-pseudoword), identified in the EEG-based functional networks of normally developing children were not present in the networks of dyslexics. The hub distribution for dyslexics in the θ, α, and β1 bands became similar to that of the controls. The topological organization of functional networks and the less efficient network configuration (long characteristic path length) in dyslexics compared to the more optimal global organization in the controls was studied for the first time after remediation training.

Functional Connectivity Network Analysis with Discriminative Hub Detection for Brain Disease Identification

Brain network analysis can help reveal the pathological basis of neurological disorders and facilitate automated diagnosis of brain diseases, by exploring connectivity patterns in the human brain. Effectively representing the brain network has always been the fundamental task of computeraided brain network analysis. Previous studies typically utilize human-engineered features to represent brain connectivity networks, but these features may not be well coordinated with subsequent classifiers. Besides, brain networks are often equipped with multiple hubs (i.e., nodes occupying a central position in the overall organization of a network), providing essential clues to describe connectivity patterns. However, existing studies often fail to explore such hubs from brain connectivity networks. To address these two issues, we propose a Connectivity Network analysis method with discriminative Hub Detection (CNHD) for brain disease diagnosis using functional magnetic resonance imaging (fMRI) data. Specifically, we incorporate both feature extraction of brain networks and network-based classification into a unified model, while discriminative hubs can be automatically identified from data via ℓ1-norm and ℓ2,1-norm regularizers. The proposed CNHD method is evaluated on three real-world schizophrenia datasets with fMRI scans. Experimental results demonstrate that our method not only outperforms several state-of-the-art approaches in disease diagnosis, but also is effective in automatically identifying disease-related network hubs in the human brain.

Refined parcellation of the nervous system by algorithmic detection of hidden features within communities.

The nervous system can be represented as a multiscale network comprised by single cells or ensembles that are linked by physical or functional connections. Groups of morphologically and physiologically diverse neurons are wired as connectivity patterns with a certain degree of universality across species and individual variability. Thereby, community detection approaches are often used to characterize how neural units cluster into such densely interconnected groups. However, the communities may possess deeper structural features that remain undetected by current algorithms. We present a scheme for refined parcellation of neuronal networks, by identifying local integrator units (LU) that are contained in network communities. An LU is defined as a connected subnetwork in which all neuronal connections are constrained within this unit, and can be formed for instance by a set of interneurons. Our method uses the Louvain algorithm to detect communities and participation coefficients to discriminate local neurons from global hubs. The sensitivity of the algorithm for discovering LUs with respect to the choice of community detection algorithm and network parameters was tested by simulations of different synthetic networks. The appropriateness of the algorithm for real-world scenarios was demonstrated on weighted and binary Caenorhabditis elegans connectomes. The detected LUs are distinctly localized within the worm body and clearly define functional groups. This approach provides a robust, observer-independent parcellation strategy that is useful for functional structure confirmation and potentially contributes to the current efforts in quantitative whole-brain architectonics of different species as well as the analysis of functional connectivity networks.

Brain network analysis of EEG functional connectivity during imagery hand movements

The characterization of human neural activity during imaginary movement tasks represent an important challenge in order to develop effective applications that allow the control of a machine. Yet methods based on brain network analysis of functional connectivity have been scarcely investigated. As a result we use graph theoretic methods to investigate the functional connectivity and brain network measures in order to characterize imagery hand movements in a set of healthy subjects. The results of the present study show that functional connectivity analysis and minimum spanning tree (MST) parameters allow to successfully discriminate between imagery hand movements (both right and left) and resting state conditions. In conclusion, this paper shows that brain network analysis of EEG functional connectivity could represent an efficient alternative to more classical local activation based approaches. Furthermore, it also suggests the shift toward methods based on the characterization of a limited set of fundamental functional connections that disclose salient network topological features.

Functional Networks Analysis from Multi Neuronal Spike Trains on Prefrontal Cortex of Rat during Working Memory Task and Neuronal Network Simulation

Functional connectivity networks on prefrontal cortex of rat during working memory task in vivo are analyzed. Neural ensemble entropy coding is applied to find the time interval of working memory event occurrence. The analysis of functional connectivity networks is carried out though the method of cross-covariance. And functional networks of the occurrence working memory event and resting state are obtained. The complex network topology parameters are calculated, the two networks satisfy the small-world network property as the clustering coefficients of them are larger than their corresponding random networks and their characteristic path lengths are approximately equal to their corresponding random networks. Finally, the simulations of spiking neuronal networks of working memory event occurrence and resting state are presented. Hindmarsh-Rose neuron model is chosen as single neuron of prefrontal cortex that connected by functional network of working memory event occurrence and resting state, receptivity. The simulation results are agreed with experiment data in rat prefrontal cortex during a working memory task.