Nematode Diversity Research Articles

Biological traits and functional diversity of free-living nematode assemblages along a water-depth gradient in the northwestern of Gulf of Mexico

This study analyzed the biological traits (BTs) and functional diversity (FD) of free-living nematodes in the northwestern of Gulf of Mexico. We collected sediment samples at 27 sites at a depth gradient from 44 to 3466m. The nematodes were identified at species level and classified in five groups of BTs: feeding type, amphid shape, tail shape, body shape, and body length. We determined the FD based on the combination of BTs through a functional dendrogram, using the total length of the branch as a measure of functional diversity. Salinity, pH, and dissolved oxygen were measured in each site, as well as the sediment composition and percentage of organic carbon (OC). A total of 1673 nematodes were identified, belonging to 35 families, 96 genera, and 153 species. The number of species varied along water depth (1 to 60 species). The more abundant BTs were the non-selective deposit feeders (49%), amphid spiral shape (55%), clavate conical cylindrical tail (52%), sizes 1000-1500 μm (51%), and body shape slender (97%). The most common combination of traits was non-selective deposit feeders, spiral amphid, clavate conical cylindrical tail, slender shape, and sizes < 1500 μm. The changes of BTs with increasing depth were more evident in the feeding types and amphid shape. The FD fluctuated between sites (0.42-0.99) and was significantly correlated with the number of species, suggesting that taxonomic and functional diversity have similar responses to environmental variables. The FD was significantly influenced only by the percentage of sands. Our data provide valuable information that can be used in subsequent studies and benthos monitoring.

Soil microfauna mediate multifunctionality under multilevel warming in a primary forest

Abstract Soil microfauna play a crucial role in maintaining multiple functions associated with soil phosphorous, nitrogen and carbon cycling. Although both soil microfauna diversity and multifunctionality are strongly affected by climate warming, it remains unclear how their relationships respond to different levels of warming. We conducted a 3‐year multilevel warming experiment with five warming treatments in a subtropical primary forest. Using infrared heating systems, the soil surface temperature in plots was maintained at 0.8, 1.5, 3.0 and 4.2°C above ambient temperature (control). Our findings indicated that low‐level warming (+0.8–1.5°C) increased soil multifunctionality, as well as nematode and protist diversity, compared with the control. In contrast, high‐level warming (+4.2°C) significantly reduced these variables. We also identified significant positive correlations between soil multifunctionality and nematode and protist diversity in the 0–10 cm soil layer. Notably, we found that soil multifunctionality and protist diversity did not change significantly under 3.0°C warming treatment. Our results imply that a temperature increase of around 3°C may represent a critical threshold in subtropical forests, which is of great importance for identifying response measures to global warming from the perspective of microfauna in the surface soil. Our findings provide new evidence on how soil microfauna regulate multifunctionality under varying degrees of warming in primary forests.

Occurrence of plant-parasitic nematodes on rice (Oryza sativa) in Kenya with a focus on Hirschmanniella oryzae

Summary Rice ranks as the third most important staple cereal food crop in Kenya, following maize and wheat. The demand for rice has been increasing at a faster rate than most cereals, occasionally requiring imports to meet local needs. In response, the Kenyan government has been implementing a programme to increase rice production by expanding irrigated lowland rice schemes from 32 988 to 171 676 ha, while increasing rain-fed upland production areas four-fold to 42 000 ha by 2030. However, with continued rice monocropping in irrigated lowland fields and intensification in rain-fed upland ecosystems, there is a growing concern that plant-parasitic nematodes may emerge as a significant problem across rice ecosystems. This study characterised the nematode genera associated with rice in Kenya and assessed their diversity and distribution across rice ecosystems, with a focus on Hirschmanniella species. Eleven nematode genera were identified in both ecosystems, indicating a relatively high diversity. These genera, ranked by prominence, included Hirschmanniella, Hoplolaimus, Pratylenchus, Helicotylenchus, Meloidogyne, Ditylenchus, Trichodorus, Xiphinema, Rotylenchus, Longidorus and Paratylenchus. The family Tylenchidae was also found to be an important component of the nematofauna. Both morphological and molecular analyses confirmed the presence of Hirschmanniella oryzae in irrigated lowland and rain-fed upland rice, which represents the first documented report for Kenya. A notably large molecular variation was also observed for these Kenyan populations on the 18S region, with intraspecific variation up to 10 bp difference. Understanding the diversity, distribution, and species composition of nematodes in rice ecosystems is important for raising awareness among plant protection services, farmers, cooperatives and extension agents about plant-parasitic nematodes and their challenges in rice production. Future research should build on this knowledge to support extensive studies on population dynamics and damage threshold, focusing on local rice cultivars to develop effective management strategies, including breeding programmes and other cultural practices.

Prevalence and abundance of plant-parasitic nematodes in New Zealand maize fields: effects of territory, soil orders, crop stage, and sampling time

ABSTRACT Plant-parasitic nematodes (PPNs) are significant agricultural pests that can reduce maize yields. This study examines the prevalence, abundance, and diversity of PPNs in New Zealand maize fields, focusing on the effects of territory, soil orders, crop stages, and sampling times. Seven PPN genera were identified: Pratylenchus spp. (root-lesion), Helicotylenchus spp. (spiral), Meloidogyne spp. (root-knot), Heterodera spp. (cyst), Paratylenchus spp. (pin), Criconemella spp. (ring), and Tylenchus spp. PPNs were present in 98% of the samples, with Pratylenchus spp. being the most prevalent (91%), followed by Helicotylenchus spp. (38%). Compared to Waikato and Manawatu-Whanganui, Canterbury had the highest nematode populations, particularly of Pratylenchus spp. and Helicotylenchus spp. Brown and pallic soils supported higher PPN abundances. Sampling during the maize harvesting stage and late autumn resulted in the highest nematode populations and diversity indices. Pratylenchus spp. populations often exceeded the economic threshold of 500 Pratylenchus kg−1 of soil, suggesting a significant threat to maize yield in New Zealand. The findings highlight the need for further research to assess the impact of Pratylenchus spp. on maize yield and to develop effective management practices for maize cultivation in the country.

Changes in the population and diversity of plant parasitic nematodes and their effects on sugarcane growth at Wonji‐Shoa Sugar Estate, Ethiopia

AbstractIn Wonji‐Shoa Sugar Estate (WSSE), sugarcane (Saccharum spp. hybrid) yields have declined by about 48% over the last 70 years. One of the causes for the decline is assumed to be the long‐term monoculture production system that results in the buildup of plant parasitic nematodes (PPNs). Therefore, the population and diversity of PPNs were investigated by conducting soil sampling using a biosequential method (simultaneous sampling of the soils of adjacent cultivated land [CL] and uncultivated land [UL]) and a chronosequential method (taking soil samples at different times from the same site). The samples were subjected to analysis using standard procedures to determine the change in the population, and identify the genera of PPNs. Additionally, a pot experiment that involved fumigation was conducted on top soils sampled from the CL and UL of the plantation. The results revealed that about 10 genera of PPNs (Meloidogyne, Helicotylenchus, Hoplolaimus, Rotylenchulus, Hemicycliophora, Discriconemella, Xhiphinema, Pratylenchus, Tylenchorhynchus, and Scutellonema) were detected, of which the first four were newly identified. The population density and the number of genera of PPNs found in the CL were 36‐fold and 4.5‐fold higher than those found in the UL, respectively. Furthermore, fumigation reduced the population of the PPNs by 61% and increased production of cane biomass by 63%. It is concluded that the soils of the WSSE are infested by PPNs, which consequently have detrimental effects on sugarcane growth. While amending soil fertility is crucial, reversing the decline in sugarcane yields also necessitates implementing an integrated soil management system that includes PPNs.

Plant-Parasitic and Free-Living Nematode Community Associated with Oak Tree of Magoebaskloof Mountains, Limpopo Province, South Africa

A study was conducted in the mountains of Magoebaskloof, Limpopo Province, where oak trees grow along the banks of the Broederstroom River. This study revealed that 22 nematode genera were associated with oak trees (Quercus robur). The most frequently occurring nematodes were Aphelenchus sp. (100%) and Plectus sp. (100%), followed by Helicotylenchus sp. (90%). This study examined the relationship between nematodes and the physicochemical properties of the soil using Pearson correlation. It uncovered that the organic matter content (OMC) had a negative correlation with the number of Panagrolaimus sp. (r = −0.770) and Hemicycliophora sp. (r = −0.674). Conversely, the sand percentage positively correlated (r = 0.695) with the number of Hemicycliophora sp. The clay content of the soil showed a positive correlation (r = 0.617) with the number of Ditylenchus. Soil pH demonstrated a significant negative correlation with Acrobeloides sp. (r = −0.877). The canonical correspondence analysis (CCA) explained 63.3% of the relationship between nematodes and soil physicochemical properties. The CCA results indicated that Ditylenchus exhibited a positive correlation with OMC, while the Panagrolaimus and Hemicycliophora species showed a negative correlation with OMC. The results indicated that none of the soil sample sites were under stress. The soil food web analysis revealed that most soil samples were nutrient-enriched with a low C/N ratio. In conclusion, this study revealed that oak trees harbor a high diversity of plant-parasitic and free-living nematodes. The results suggest that soil nematodes, particularly free-living bacterivores, such as Panagrolaimus, can indicate organic matter content in the soil.

New species of the genus Alippistrongylus (Nematoda: Trichostrongylina) parasitic in Delomys dorsalis (Rodentia: Sigmodontinae) in the Atlantic Forest of Rio de Janeiro, Brazil.

We describe a new species of the genus Alippistrongylus (Nematoda: Trichostrongylina) in the small intestine of Delomys dorsalis (Rodentia: Sigmodontinae) found in Itatiaia National Park (Parque Nacional do Itatiaia, PNI), state of Rio de Janeiro, Brazil. The new species can be distinguished between the other two species previously described by the following morphological characteristics: pattern of the rays from the caudal bursa rays in males and the spherical-shaped appendage in the female. Additionally, we provide molecular genetic data from the new species. The discovery of Alippistrongylus itatiaiaensis sp. n. expands our understanding of nematode diversity and underscores the importance of parasite studies in biodiversity conservation. Its occurrence in a preserved area like the PNI emphasises the role of such habitats in maintaining unique ecological interactions.

Metabarcoding reveals that arboreal habitats contribute significantly to nematode diversity in different forest ecosystems

Metabarcoding reveals that arboreal habitats contribute significantly to nematode diversity in different forest ecosystems

Prevalence and Diversity of Plant Parasitic Nematodes in Irish Peatlands

The prevalence of plant parasitic nematodes (PPN) in the Irish peatlands was investigated in five different peatland habitats—raised bog, cutover scrub/woodlands, fens and peat grasslands, which were further sub-categorised into fourteen different sub-habitats. Within the raised bog habitat were healthy bog hummock (HBH), healthy bog lawn (HBL), degraded bog hummock (DBH) and degraded bog lawn (DBL) and the fen habitats were fen peat (FP) and rich fen peat (R-FP). Cutover scrub or woodland habitat included cutover scrub rewetted (C-RW), cutover scrub non-rewetted (C-NRW), woodlands rewetted (W-RW) and woodlands non-rewetted (W-NRW). Grassland included wasted peat (WP), rough grazing (RG-I) and improved fen peat grassland (IFPG-RW and IFPG-NRW). Soil samples from peatlands were all collected between July and December 2023 when the temperature ranged from 12 to 20 °C. One half of each sample was used for molecular nematode analysis and the other half for morphological identification of nematodes. For the morphological identification, a specific nematode extraction protocol was optimised for peatland soils, and the extracted nematodes were fixed onto slides to be studied under a high-power light microscope. Subsequently, the other part of the soil was processed to isolate total DNA, from which the 18S rRNA gene was sequenced for the identification of nematode taxa. The extracted DNA was also used for randomly amplified polymorphic DNA (RAPD) fingerprinting analysis to determine banding patterns that could classify different bog habitats based on PPN random primers. Compared to that in the climax habitats (HBH, HBL, DBH, DBL, FP, R-FP), PPN prevalence was recorded as being higher in grasslands (WP, RG-I, IFPG-RW and IFPG-NRW) and scrub/woodland ecosystems (C-RW, C-NRW, W-RW, W-NRW). The results indicate that nematode populations are different across the various bog habitats. Emerging and current quarantine PPN belonging to the families Pratylenchidae, Meloidogynidae, Anguinidae and Heteroderidae were noted to be above the threshold limits mentioned under EPPO guidelines, in grassland and wooded peatland habitats. Future actions for PPN management may need to be considered, along with the likelihood that these PPN might impact future paludiculture and other crops and trees growing in nearby agricultural lands.

Impact of Transition from Natural Grasslands Steppe to Monoculture Artificial Grasslands on Soil Food Webs in the Qinghai–Tibet Plateau

Addressing the imbalance of the livestock–forage–environment system on the Qinghai–Tibet Plateau (QTP), the extensive replacement of natural grasslands with artificial grasslands has been pursued to enhance forage yield and quality. Recognizing their pivotal role in soil ecology, soil nematodes serve as sensitive indicators of the soil ecosystem structure and function. In this context, we embarked on a field investigation aimed at discerning the impact of varying artificial grasslands on soil nematode communities and food webs, with the intent of identifying an optimal forage species through the lens of soil nematode dynamics in the temperate steppe of the QTP. Our findings indicate that artificial grasslands, on the whole, tend to augment the soil nematode diversity—as reflected in the increased Margalef richness—and modify the community structure. Notable enhancements were observed in the abundance of bacterivores and omnivores, the fungivore and omnivore biomass carbon, and the connectance within fungal and bacterial channels. Specific insights reveal that grasslands established with Elymus nutans and Elymus sinosubmuticus notably boost the Margalef richness, omnivore biomass carbon, and both functional and structural metabolic footprints, with E. sinosubmuticus grasslands uniquely elevating the fungal channel connectivity. Elymus sibiricus grasslands, in particular, were associated with increased fungivore biomass carbon and metabolic footprints, as well as increased connectance in fungal and omnivore–predator channels. In summation, E. sibiricus, E. nutans, and E. sinosubmuticus emerge as superior choices for artificial grassland cultivation on the QTP, as suggested by soil nematode indicators. The adoption of mixed-species sowing incorporating these three candidates potentially offers enhanced benefits to the soil food web, although this hypothesis warrants further investigation.

Continuous cropping obstacles: Insights from the community composition and the imbalance carbon fluxes within soil nematode food web

Long-term continuouscroppingcan lead to the deterioration of soil environment and the decrease of soil productivity. However, the biological mechanism on the negative effects of long-term continuous cropping has not been extensively explored. Soil nematode food web with multiple trophic levels play critical roles in nutrient cycling and energy flowing in the agroecosystem. Quantifying the carbon flux through different trophic channels within the nematode food web can indicate how continuous cropping influences carbon cycling in the agroecosystem by altering soil biota communities. Therefore, the effects of continuous peanut cropping with different years (1, 5, 20, and 30 years) on soil properties, soil nematode community composition, carbon flux within nematode food web and crop yields were investigated. Results showed that soil pH significantly decreased with increasing continuous cropping years. Differently, soil organic carbon and total nitrogen were the highest in 20-year, and decreased in 30-year of continuous cropping. As continuous cropping years increased, the relative abundance of microbivorous nematodes decreased and that of plant parasites reached as high as 76.11 % and 68.22 % in 20- and 30-year, respectively. Pearson correlation analysis revealed the nematode diversity, the carbon flux uniformity and peanut yield had a significant negative correlation with continuous cropping years. The random forest model indicated that the soil pH and the relative abundance of plant parasites were the key influence factor of the carbon flux uniformity within soil nematode food web. Outbreaks of plant parasites lead to the disruption of carbon flux uniformity within soil nematode food web, which can increase the risk of peanut yield decline after long-term continuous cropping. In conclusion, continuous peanut cropping changed soil properties, reduced soil nematode diversity, and disturbed the multitrophic carbon flux complementarity and uniformity in soil nematode food web, ultimately limiting the crop productivity. This study enhances our understanding of the importance of the resource transfers among soil food web in maintaining sustainable agroecosystem productivity.

Root traits drive the recovery of soil nematodes during restoration of open mines in a tropical rainforest

Mining is a major threat to vegetation and soil in the tropical forests. Reforestation of degraded surface mines is critically dependent on the recovery of soil health, where the nematodes play an important role. However, the key determinants of community assembly of soil nematodes during mine-restoration remain unknown in the tropical rainforests. Here, the recovery of taxonomic diversity of nematode communities and their trophic groups during reforestation of an extremely degraded tropical open-mining area is studied. The factors that may impact their recovery, such as root traits (length, area and tissue density), soil properties (pH and soil organic matter content (SOM)), and taxonomic diversities of soil bacterial and fungal communities are investigated. Differences in these parameters were evaluated in the three soil types: (i) mined soil - the erstwhile soil that was removed during mining and stock-piled for 10 years at the foot of an extremely degraded open-mining area; (ii) reforested soil, sampled from a 10-year successful restoration, which used the mined soil for reforestation; and (iii) undisturbed soil, collected from an adjacent undisturbed/not-mined tropical rainforest. A total of 11, 34 and 29 nematode-genera were identified in mined-, undisturbed-, and reforested soils, respectively. The taxonomic diversities of the 5 nematode groups in the mined soil were 1.5–5.2 times lower than in the undisturbed soil, but were similar in the restored and undisturbed soils. Taxonomic diversities of phytophagous and predator nematodes were correlated to restored root traits; whereas of bacterivores, fungivores, and omnivores were correlated to pH, SOM, soil bacterial and fungal communities. Consequently, complete loss of roots during mining likely severely reduced the nematodes, but their recovery after reforestation led to the restoration of taxonomic diversity of nematode communities. The mix-planting fast-growing tree species may be appropriate for recovering soil health, including nematode diversity, during reforestation of open tropical mines.

Post-fire recovery of nematode communities along a slope gradient in a pine forest.

We investigated the enduring consequences of a wildfire on nematode diversity and abundance in a pine forest, employing a slope gradient approach. Our primary objective was to determine the extent of post-fire alterations in the nematode community 3years after the incident, to understand if the ecosystem has returned to its pre-fire state or has transitioned to a distinctive ecological environment. Three distinct burned pine forest sites at varying elevations were sampled to capture short-scale soil property variations due to slope gradients, while unburned forest sites served as controls. A consistent pattern emerged where the lowest altitude sites exhibited the highest nematode abundances, although still lower than unburned sites. Fire-induced changes were profound, shifting from fungivore dominance in unburned sites to bacterivore and herbivore dominance in burned sites. Alterations in soil properties post-fire, particularly reduced organic matter and nitrogen content, were closely associated with nematode community shifts. Water availability played a crucial role with lower moisture levels at higher elevations impacting nematode populations. Structural differences in the nematode community primarily resulted from fire disturbance rather than altitude. This study emphasizes the persistent and transformative impact of wildfire on nematode communities, highlighting the intricate interplay between ecological disturbances, soil properties, and nematode trophic dynamics.

Nematode Diversity and Root-Knot Nematode Management Approaches for Sustainable Mulberry Production

Mulberry ecosystems are beset by the clandestine menace of nematodes, precipitating devastating consequences on plant productivity. This review highlights the importance of nematode diversity in mulberry ecosystems and explores various eco-friendly and sustainable approaches for managing the root-knot nematode, Meloidogyne incognita involving cultural, biological and host resistance methods. Various eco-friendly management strategies viz., cultural approaches like summer deep ploughing, mulching and trap crops; biological methods like bio-agents and plant extracts; and resistant varieties against the root-knot nematode infecting mulberry are reviewed and discussed providing an impetus for integrating multiple approaches for effective and sustainable root-knot nematode management.

Response of soil nematode community structure and metabolic footprint to nitrogen addition in alfalfa fields on the Loess Plateau

Nematodes serve as key indicators of soil health in ecological studies. Therefore, the current study examined the community structure and metabolic footprint of soil nematodes in alfalfa fields across varying levels of N supply in the semi-arid Loess Plateau. The findings offer theoretical guidance for the sustainable management of artificial alfalfa grasslands in this region. The research was based on alfalfa fields with different N application rates (0, 50, 100, 150 kg/ha2) as the research object, The shallow plate method was used to separate and extract soil nematodes, identify soil nematode groups, calculate ecological function index and metabolic footprint, and identify indicator species. A total of 6346 nematodes were isolated in this study, belonging to 27 genera and 19 families. Notably, the plant parasitic nematode Helicotylenchus was predominant. As N addition increased, the plant parasitic index (PPI) increased significantly. A N50 application significantly enhanced the soil nematode diversity index (H\\documentclass[12pt]{minimal} \\usepackage{amsmath} \\usepackage{wasysym} \\usepackage{amsfonts} \\usepackage{amssymb} \\usepackage{amsbsy} \\usepackage{mathrsfs} \\usepackage{upgreek} \\setlength{\\oddsidemargin}{-69pt} \\begin{document}$$\ ext{H}$$\\end{document}) and the free-living index (MI). The findings showcased a noticeable decrease in disturbance within the N50 soil nematode community. This resulted in a mature and stable community structure primarily attributed to the heightened abundance of omnivorous/predatory nematodes. Across various N levels, soil nematode communities underwent significant alterations in the soil food web structure through shifts in their metabolic footprint. Future strategies should focus on refining N management practices and integrating sustainable approaches like crop rotation and pest management. These efforts will contribute to guidelines ensuring artificial alfalfa grasslands lasting health and productivity.

Assessment of nematode and microbial diversity and screening of entomopathogens in revegetated post-coal-mining land in Kutai Kartanegara District, East Kalimantan, Indonesia

Abstract. Sopialena, Rosfiansyah, Suryadi A. 2024. Assessment of nematode and microbial diversity and screening of entomopathogens in revegetated post-coal-mining land in Kutai Kartanegara District, East Kalimantan, Indonesia. Biodiversitas 25: 2921-2930. Post-coal-mining management should strive toward site revegetation. The success of such revegetation efforts is largely determined by the soil's fertility status, which encompasses physical, chemical, and biological components. Biological fertility is indicated by the presence and abundance of soil microbes and nematodes. The objective of this study was to identify the diversity of nematodes and soil microbes in ex-coal-mining land revegetated with oil palm in Kutai Kartanegara District (East Kalimantan, Indonesia), to screen for entomopathogenic nematodes and microbes, and to analyze their relationships with the chemical fertility status of the land. As a control, non-mining land was also investigated. The results showed that microbial diversity and density (including fungi and bacteria) in the ex-coal-mining area were significantly lower compared to the control. Additionally, a decrease in microbial diversity and density was found in deeper soil layers of both post-mining and non-mining lands. In contrast, soil nematodes were more abundant in post-mining land, both in terms of diversity and density, and were also more plentiful in the deeper soil layers. Among the nematodes and microbes studied, only Heterorhabditis and Steinernema (nematodes), Trichoderma (fungi), and Bacillaceae (bacteria) were identified as entomopathogens, causing death in Tenebrio molitor L. larvae. Overall, soil fertility in ex-coal-mining land was observed to be lower, characterized by decreased soil pH, basic saturation, Soil Organic Carbon (SOC), and nutrient content, which contributed to a reduced microbial community compared to non-mining land.

Improving understanding of nematode communities in agricultural settings: a comparison of mitometagenomics and morphology

Florida’s strawberry production provides significant economic benefit for the State; however, plant-parasitic nematodes (PPNs) pose a significant barrier to production. A better understanding of the distribution of nematode diversity in these fields could help to evaluate the potential risk to crops in agricultural fields and support more sustainable PPN management, but accurate analysis of constituent nematode species is key. The use of targeted mitometagenomics (mtMG) to identify nematode species has shown promise with nematode mock communities, but it remains unclear how it compares in natural agricultural settings and to the more traditional morphology-based approach. In this study, we performed a diversity survey of nematode communities across four different strawberry fields at four depths in the State of Florida using both mtMG and morphological methods. We observed significant differences in nematode community richness and composition between the two methods. Both methods failed to detect taxa recovered by the other method, due to method-specific biases resulting from differential detection of trophic groups. Importantly, both methods did agree on the detection and distribution of Meloidogyne, the most abundant PPNs with the added benefit of the mtMG precisely describing specific species. Despite significant community differences, both methods pointed to the important role of both field and depth in shaping these communities and provided evidence of PPN migration across the soil profile. In conclusion, our findings support the complementary use of multiple detection/identification methods when evaluating nematode diversity, particularly for PPNs.

Enhanced plant litter impacts nematode communities and carbon use efficiency in a mixed forest

Abstract Rising temperatures and higher atmospheric CO2 levels can potentially increase plant photosynthesis and boost forest productivity, thereby spurring litter inputs to soils on a global scale. Understanding the feedback loops between increased litter inputs and soil biota activity will allow for better prediction of organic matter and carbon (C) cycling in terrestrial ecosystems. Nematodes represent the full spectrum of trophic groups within the soil biota. Accordingly, we studied the link between nematode metabolic activities and plant litter input. For this, different litter input levels were manipulated in a temperate forest, including control zones without litter, natural litter input zones and zones with double, triple and quadruple amounts of natural litter input. Soil top layers (0–10 cm) were then collected to study the responses of nematode communities. Increased litter input positively influenced the abundance and diversity of nematodes, except for plant‐parasitic species. Higher litter input levels led to an enhancement in the ratio of bacterivores to the total of bacterivores and fungivores. More litter increased the K/r strategist ratio among bacterivores and the corresponding nematode metabolic footprints. More litter also stimulated nematode production and respiration components and improved the carbon use efficiency of bacterivores. Moreover, structural equation modelling revealed the crucial role of bacterivores in influencing soil organic C under increased litter input. In conclusion, our study shows that increased plant above‐ground litter input modifies the taxonomic and functional communities of soil nematodes, ultimately regulating carbon cycling in forest soils. Read the free Plain Language Summary for this article on the Journal blog.

Structure and function role of soil nematode communities in different types of vegetation in Yogyakarta and Central Java, Indonesia

Abstract. Indarti S, Utami SNH, Putra NS, Maharani R. 2024. Structure and function role of soil nematode communities in different types of vegetation in Yogyakarta and Central Java, Indonesia. Biodiversitas 25: 2765-2772. Soil nematodes are crucial parts of the soil organism community and play a significant role in many ecological soil processes. It is necessary to pay greater attention to the lack of knowledge regarding the composition and role of the soil nematode community in different vegetations. Hence, the nematode structure community from minimal to soil stillages have been observed and compared from seven distinct types of vegetation. This study aimed to determine the soil nematode community structure, which includes the dominance, abundance, richness, diversity, and functional role of nematodes, as well as other chemical soil properties. Vegetation type represents soil management and has an impact on the life of soil organisms such as nematodes. A total of approximately 2328 soil nematodes were found, and 18 genera were identified. The Nematode Indicator Joint Analysis (NINJA) revealed that the vegetation type, land use, and soil chemical properties influence the nematode’s abundance, dominance, and structure differently. Through those results, the authors confirmed that soil nematodes in cultivated vegetation are dominated by the trophic groups of plant-parasitic nematodes and bacterivores. Conversely, predator, omnivores, and fungivores nematodes dominate in soil with minimal tillage. Overall, this study highlights the importance of soil nematode analysis in sustainable agricultural soil ecosystems.

Soil nematode community structure reaction to organic amendments in shallot

ABSTRACT Nematode abundance and diversity could indicate soil health since they play roles in the soil nutrient cycle. In a shallot field, nematode abundance and diversity from different types of organic manure treatment were examined to determine the effect of organic fertilizer on nematode abundance. This study aimed to determine the best option of organic amendment for managing the nematode population in crop soil. The research took place in the center of a shallot plantation in Kulon Progo District, Yogyakarta, Indonesia, and consisted of four treatments: cow manure+green manure; sludge+green manure; cow manure, and chicken manure as farmer control. The nematode community was processed and analised with the PCA, which indicated a cumulative value of 94.5%. The treatment of cow and green manure contributed in nematode abundance, in which nematodes clustered were predators, bacterial feeders, and omnivores. The treatment of cow and green manure could be the best option that environmentally friendly control plant-parasitic nematodes and improve beneficial nematodes abundance that could improve the soil health by their regulation in soil.