AbstractTropical cyclones (TCs) are powered by heat fluxes across the air‐sea interface, which are in turn influenced by subsurface physical processes that can modulate storm intensity. Here, we use data from 6 profiling floats to recreate 3D fields of temperature (T), salinity (S), and velocity around the fast‐moving Super Typhoon Mangkhut (western North Pacific, September 2018). Observational estimates of vorticity (ζ) and divergence (Γ) agree with output from a 3D coupled model, while their relation to vertical velocities is explained by a linear theoretical statement of inertial pumping. Under this framework, inertial pumping is described as a linear coupling between ζ and Γ, whose oscillations in quadrature cause periodic displacements in the ocean thermocline and generate near‐inertial waves (NIWs). Vertical profiles of T and S show gradual mixing of the upper ocean with diffusivities as high as κ ∼ 10−1 m2 s−1, which caused an asymmetric cold wake of sea surface temperature (SST). We estimate that ∼10% of the energy used by mixing was used to mix rainfall, therefore inhibiting SST cooling. Lastly, watermass transformation analyses suggest that κ > 3 × 10−3 m2 s−1 above ∼110 m depth and up to 600 km behind the TC. These analyses provide an observational summary of the ocean response to fast‐moving TCs, demonstrate some advantages of ζ and Γ for the study of internal wave fields, and provide conceptual clarity on the mechanisms that lead to NIW generation by winds.