Natural Environment Research Council Research Articles

Anatomy of Heinrich Layer 1 and its role in the last deglaciation

This research used data acquired at the XRF Core Scanner Lab at the MARUM–Center for Marine Environmental Sciences, University of Bremen, Germany. This research used samples provided by the International Ocean Discovery Program (IODP). Funding for this research was provided by the UK Natural Environmental Research Council (NERC) to Hodell. The NERC Radiocarbon Facility supported two radiocarbon dates, and Wally Broecker generously supported the remainder with funding from the Comer Family Foundation. Research by Rodriguez-Tovar and Dorador was financed by Project CGL2015-66835-P. B.M. acknowledges support from the CSIC-Ramon y Cajal postdoctoral programme RYC-2013-14073. J.F.E. would like to acknowledge funding under ERC Advanced grant 320750- Nanopaleomagnetism.

Tectonics and crustal evolution

We thank the Natural Environment Research Council (grants NE/J021822/1 and NE/K008862/1) for funding.

Controls over Ocean Mesopelagic Interior Carbon Storage (COMICS): Fieldwork, Synthesis, and Modeling Efforts

The ocean’s biological carbon pump plays a central role in regulating atmospheric CO2 levels. In particular, the depth at which sinking organic carbon is broken down and respired in the mesopelagic zone is critical, with deeper remineralisation resulting in greater carbon storage. Until recently, however, a balanced budget of the supply and consumption of organic carbon in the mesopelagic had not been constructed in any region of the ocean, and the processes controlling organic carbon turnover are still poorly understood. Large-scale data syntheses suggest that a wide range of factors can influence remineralisation depth including upper-ocean ecological interactions, and interior dissolved oxygen concentration and temperature. However these analyses do not provide a mechanistic understanding of remineralisation, which increases the challenge of appropriately modelling the mesopelagic carbon dynamics. In light of this, the UK Natural Environment Research Council has funded a programme with this mechanistic understanding as its aim, drawing targeted fieldwork right through to implementation of a new parameterisation for mesopelagic remineralisation within an IPCC class global biogeochemical model. The Controls over Ocean Mesopelagic Interior Carbon Storage (COMICS) programme will deliver new insights into the processes of carbon cycling in the mesopelagic zone and how these influence ocean carbon storage. Here we outline the programme’s rationale, its goals, planned fieldwork and modelling activities, with the aim of stimulating international collaboration.

Meeting the challenge of environmental data publication: an operational infrastructure and workflow for publishing data

Here we describe the defined workflow and its supporting infrastructure, which are used by the Natural Environment Research Council's (NERC) Environmental Information Data Centre (EIDC) (http://eidc.ceh.ac.uk/) to enable publication of environmental data in the fields of ecology and hydrology. The methods employed and issues discussed are also relevant to publication in other domains. By utilising a clearly defined workflow for data publication, we operate a fully auditable, quality controlled series of steps permitting publication of environmental data. The described methodology meets the needs of both data producers and data users, whose requirements are not always aligned. A stable, logically created infrastructure supporting data publication allows the process to occur in a well-managed and secure fashion, while remaining flexible enough to deal with a range of data types and user requirements. We discuss the primary issues arising from data publication, and describe how many of them have been resolved by the methods we have employed, with demonstrable results. In conclusion, we expand on future directions we wish to develop to aid data publication by both solving problems for data generators and improving the end-user experience.

Postcopulatory sexual selection when a female mates once

Natural Environment Research Council (UK) [Grant number is 1109354 (DTG studentship to LRD)] and the Australian Research Council for funding.

Arctic browning: extreme events and trends reversing arctic greening.

Arctic browning: extreme events and trends reversing arctic greening.

Automatic Bayesian polarity determination

This work was funded under a Natural Environment Research Council (NERC) studentship as a CASE award with Schlumberger. Seismometers were borrowed from the NERC SEIS-UK (loan 842), who also archive the data.

Land Ocean Interaction - Measuring and Modelling Fluxes from River Basins to Coastal Seas

The UK Land-Ocean Interaction Study (LOIS) provided a major opportunity to measure and model the processes controlling the fluxes of materials between river basins and coastal seas. The main programme of research took place between 1992 and 1998, funded by the UK Natural Environment Research Council, and involved approximately 360 coastal researchers contributing to more than 70 collaborative projects. This book presents accessible summaries of key results of this research. The ten chapters of the book are written by leading contributors to the programme, and cover aspects of the physical, sedimentological, chemical and biological processes controlling fluxes between river catchments and coastal seas in temporate environments. Major overarching themes for all of the chapters include the persistence, storage, degradation and transport of pollutants from catchment to coastal sea, and an emphasis on the relevance of research for river and coastal water quality management. The chapters also describe a number of important technological advances in the measurement of processes and longer term monitoring of the fluvial, estuarine and coastal environments. Approaches to monitoring were also transferred between disciplines, in many cases for the first time. The rivers and coastal programme of LOIS was unique in its scale and inter-disciplinarity and its results are of lasting value. This book provides a useful and important summary of many of its results and an effective introduction to the research for those who want to delve more deeply into the data and published papers. It will be of interest to scientists, environmental managers and scientific policy makers. This title belongs to European Water Research Series ISBN: 9781900222105 (Print) ISBN: 9781780402222 (eBook)

Genetic markers validate using the natural phenotypic characteristics of shed feathers to identify individual northern goshawksAccipiter gentilis

Acknowledgements We are grateful to S. Piertney for allowing access to laboratory facilities and to M. Wenzel, R. Ogden and G. Murray-Dickson for their advice on genetic methods. This research was partly funded by a Natural Environment Research Council studentship NE/J500148/1 to SH and by Natural Research Limited.

Magmas Erupted during the Main Pulse of Siberian Traps Volcanism were Volatile-poor

This work was supported by a Natural Environment Research Council (NE/H012648/1) and a Natural Environment Research Council Ion Microprobe Facility award. S.S. acknowledges Trinity Hall (Cambridge, UK) for providing a Mann Studentship towards her PhD studies. The Centre for Physics of Geological Processes, University of Oslo, provided the fieldwork funding.

Polar science strategies for institute managers

ABSTRACTManaging polar research is a tremendous challenge. It covers work at sea on rough and intimidating oceans, and on land over crevassed terrain or rotten sea ice with the prospect of death or frostbite. These environments are extremely hostile and difficult to work in. Results are costly to obtain, and yet the work is of vital importance, as the polar regions are the world's freezers, critical components of the climate system, and repositories of amazing biodiversity. These regions are grossly undersampled, and relatively poorly monitored. National efforts are best carried out in an international framework, in which cooperation is essential for major breakthroughs, and the exchange and sharing of data and information and facilities is essential for ongoing monitoring of change. Under the circumstances the managers of polar research institutes must proceed with well-developed strategies. Given the growing interest of different countries in the polar regions, it would seem useful to bring together advice won through hard effort over the years in how best to develop strategies for polar scientific institute management. This discussion paper offers advice on how such strategies may best be developed.The author has compiled this based on many years of management experience in both the ocean and polar sciences with the following institutions: the UK Natural Environment Research Council's Institute of Oceanographic Sciences Deacon Laboratory, the UK's National Oceanography Centre, UNESCO's Intergovernmental Oceanographic Commission, and the International Council for Science's Scientific Committee on Antarctic Research

Post-Chernobyl surveys of radiocaesium in soil, vegetation, wildlife and fungi in Great Britain

Abstract. The data set "Post Chernobyl surveys of radiocaesium in soil, vegetation, wildlife and fungi in Great Britain" was developed to enable data collected by the Natural Environment Research Council after the Chernobyl accident to be made publicly available. Data for samples collected between May 1986 (immediately after Chernobyl) to spring 1997 are presented. Additional data to radiocaesium concentrations are presented where available. The data have value in trying to assess the contribution of new sources of radiocaesium in the environment, providing baseline data for future planned releases and to aid the development and testing of models. The data are freely available for non-commercial use under Open Government Licence terms and conditions. doi:10.5285/d0a6a8bf-68f0-4935-8b43-4e597c3bf251. Supporting information to assist with the reuse of this data is available from the Environmental Information Data Centre (EIDC) (http://eidc.ceh.ac.uk/).

Twenty Years of Data Management in the British Atmospheric Data Centre

The British Atmospheric Data Centre (BADC) has existed in its present form for 20 years, having been formally created in 1994. It evolved from the GDF (Geophysical Data Facility), a SERC (Science and Engineering Research Council) facility, as a result of research council reform where NERC (Natural Environment Research Council) extended its remit to cover atmospheric data below 10km altitude. With that change the BADC took on data from many other atmospheric sources and started interacting with NERC research programmes. The BADC has now hit early adulthood. Prompted by this milestone, we examine in this paper whether the data centre is creaking at the seams or is looking forward to the prime of its life, gliding effortlessly into the future. Which parts of it are bullet proof and which parts are held together with double-sided sticky tape? Can we expect to see it in its present form in another twenty years’ time? To answer these questions, we examine the interfaces, technology, processes and organisation used in the provision of data centre services by looking at three snapshots in time, 1994, 2004 and 2014, using metrics and reports from the time to compare and contrasts the services using BADC. The repository landscape has changed massively over this period and has moved the focus for technology and development as the broader community followed emerging trends, standards and ways of working. The incorporation of these new ideas has been both a blessing and a curse, providing the data centre staff with plenty of challenges and opportunities. We also discuss key data centre functions including: data discovery, data access, ingestion, data management planning, preservation plans, agreements/licences and data policy, storage and server technology, organisation and funding, and user management. We conclude that the data centre will probably still exist in some form in 2024 and that it will most likely still be reliant on a file system. However, the technology delivering this service will change and the host organisation and funding routes may vary.

Using wavelet tools to analyse seasonal variations from InSAR time-series data: a case study of the Huangtupo landslide

R. Tomas was supported by the Generalitat Valenciana fellowship BEST-2011/225 and by the Ministry of Education, Culture and Sport trough the project PRX14/00100. Part of this work is also supported by the Spanish Ministry of Economy and Competitiveness and EU FEDER funds under project TEC2011-28201-C02-02, by the Natural Environmental Research Council (NERC) through the GAS and LICS projects (ref. NE/H001085/1 and NE/K010794/1, respectively) as well as the ESA-MOST DRAGON-3 projects (ref. 10607 and 10665).

The Earliest History of the Skaergaard Magma Chamber: a Textural and Geochemical Study of the Cambridge Drill Core

CT and MH were supported by a Royal Society International Joint Project grant, and by the Carlsberg Foundation. CT was also supported by the Danish Council of Independent Research and the Danish National Research Foundation. The project was supported by the Natural Environment Research Council [grant number NE/F020325/1]. ON acknowledges support from Magdalene College (University of Cambridge) and the von Humboldt Foundation (Germany; University of Hannover).

The RESET project: constructing a European tephra lattice for refined synchronisation of environmental and archaeological events during the last c. 100 ka

This paper introduces the aims and scope of the RESET project (RESponse of humans to abrupt Environmental Transitions), a programme of research funded by the Natural Environment Research Council (UK) between 2008 and 2013; it also provides the context and rationale for papers included in a special volume of Quaternary Science Reviews that report some of the project's findings. RESET examined the chronological and correlation methods employed to establish causal links between the timing of abrupt environmental transitions (AETs) on the one hand, and of human dispersal and development on the other, with a focus on the Middle and Upper Palaeolithic periods. The period of interest is the Last Glacial cycle and the early Holocene (c. 100–8 ka), during which time a number of pronounced AETs occurred. A long-running topic of debate is the degree to which human history in Europe and the Mediterranean region during the Palaeolithic was shaped by these AETs, but this has proved difficult to assess because of poor dating control. In an attempt to move the science forward, RESET examined the potential that tephra isochrons, and in particular non-visible ash layers (cryptotephras), might offer for synchronising palaeo-records with a greater degree of finesse. New tephrostratigraphical data generated by the project augment previously-established tephra frameworks for the region, and underpin a more evolved tephra ‘lattice’ that links palaeo-records between Greenland, the European mainland, sub-marine sequences in the Mediterranean and North Africa. The paper also outlines the significance of other contributions to this special volume: collectively, these illustrate how the lattice was constructed, how it links with cognate tephra research in Europe and elsewhere, and how the evidence of tephra isochrons is beginning to challenge long-held views about the impacts of environmental change on humans during the Palaeolithic.

Meteorology, Air Quality, and Health in London: The ClearfLo Project

Abstract Air quality and heat are strong health drivers, and their accurate assessment and forecast are important in densely populated urban areas. However, the sources and processes leading to high concentrations of main pollutants, such as ozone, nitrogen dioxide, and fine and coarse particulate matter, in complex urban areas are not fully understood, limiting our ability to forecast air quality accurately. This paper introduces the Clean Air for London (ClearfLo; www.clearflo.ac.uk) project’s interdisciplinary approach to investigate the processes leading to poor air quality and elevated temperatures. Within ClearfLo, a large multi-institutional project funded by the U.K. Natural Environment Research Council (NERC), integrated measurements of meteorology and gaseous, and particulate composition/loading within the atmosphere of London, United Kingdom, were undertaken to understand the processes underlying poor air quality. Long-term measurement infrastructure installed at multiple levels (street and elevated), and at urban background, curbside, and rural locations were complemented with high-resolution numerical atmospheric simulations. Combining these (measurement–modeling) enhances understanding of seasonal variations in meteorology and composition together with the controlling processes. Two intensive observation periods (winter 2012 and the Summer Olympics of 2012) focus upon the vertical structure and evolution of the urban boundary layer; chemical controls on nitrogen dioxide and ozone production—in particular, the role of volatile organic compounds; and processes controlling the evolution, size, distribution, and composition of particulate matter. The paper shows that mixing heights are deeper over London than in the rural surroundings and that the seasonality of the urban boundary layer evolution controls when concentrations peak. The composition also reflects the seasonality of sources such as domestic burning and biogenic emissions.

Equine Grass Sickness in Scotland: A Case–Control Study of Environmental Geochemical Risk Factors

Reasons for performing studyEpidemiological investigations suggest that soil macro‐ and micro‐nutrients may be a trigger for the occurrence of equine grass sickness (EGS). However, there is limited information regarding relationships between exposure to geochemical elements and the occurrence of EGS.ObjectivesTo determine whether the geographical distribution of EGS cases referred to the Royal (Dick) School of Veterinary Studies was associated with the presence or absence of particular geochemical elements in the environment.Study designA retrospective time‐matched case–control study.Methods455 EGS geo‐referenced cases were identified between 1 January 1990 and 1 June 2006. Each case had 2 time‐matched geo‐referenced controls (n = 910). For study purposes, cases or controls originating outwith Scotland were excluded. Environmental concentrations of a range of elements, most with known biological function, were collated from 2 geochemical point datasets and spatially extrapolated giving continuous cover across Scotland: the British Geological Survey (BGS) Geochemical Baseline Survey of the Environment (G‐BASE) stream sediment dataset and the James Hutton Institute (JHI), National Soil Inventory of Scotland (NSIS). Data were analysed using multivariable conditional logistic regression.ResultsStatistically significant associations were obtained between the distribution of EGS cases and (i) higher environmental levels of Ca, K, Mo, Na, Se and Ti, and (ii) lower environmental levels of Al, Cd, Co, Cr, Cu, Ni and Pb. This study identified no association between EGS cases and the environmental concentrations of Ba, Ga, Fe, Mg, Mn, P or Sr.ConclusionsA number of statistically significant associations were identified between EGS cases and element concentrations in the spatially extrapolated stream sediment and soil data. This information will assist future studies on the aetiology of EGS, with further research suggested to focus on those identified significant associations with greatest biological plausibility such as reduced levels of Cu and Zn, and higher levels of K and Se.Ethical animal research: Informed client consent was obtained for the use of clinical records. Sources of funding: Part‐funded by The BGS University Funding Initiative. A.L. is funded by the Scottish Government's Rural and Environment Science and Analytical Services Division. C.E.W. is supported by The Margaret Giffen Trust. F.F. is funded by the Natural Environment Research Council (NERC). Competing interests: None.

High-resolution global climate modelling: the UPSCALE project, a large-simulation campaign

Abstract. The UPSCALE (UK on PRACE: weather-resolving Simulations of Climate for globAL Environmental risk) project constructed and ran an ensemble of HadGEM3 (Hadley Centre Global Environment Model 3) atmosphere-only global climate simulations over the period 1985–2011, at resolutions of N512 (25 km), N216 (60 km) and N96 (130 km) as used in current global weather forecasting, seasonal prediction and climate modelling respectively. Alongside these present climate simulations a parallel ensemble looking at extremes of future climate was run, using a time-slice methodology to consider conditions at the end of this century. These simulations were primarily performed using a 144 million core hour, single year grant of computing time from PRACE (the Partnership for Advanced Computing in Europe) in 2012, with additional resources supplied by the Natural Environment Research Council (NERC) and the Met Office. Almost 400 terabytes of simulation data were generated on the HERMIT supercomputer at the High Performance Computing Center Stuttgart (HLRS), and transferred to the JASMIN super-data cluster provided by the Science and Technology Facilities Council Centre for Data Archival (STFC CEDA) for analysis and storage. In this paper we describe the implementation of the project, present the technical challenges in terms of optimisation, data output, transfer and storage that such a project involves and include details of the model configuration and the composition of the UPSCALE data set. This data set is available for scientific analysis to allow assessment of the value of model resolution in both present and potential future climate conditions.

Joint inversion of surface waves and teleseismic body waves across the Tibetan collision zone: the fate of subducted Indian lithosphere

Our study has included data from GSN (including IC, IU and II), China Digital Seismograph Network, GEOSCOPE, IRIS-IDA, Pacific-21, Kyrgyz Digital Network, Kyrgyz Seismic Telemetry Network and IRIS-USGS permanent seismic networks and the MANAS, Tien Shan Continental Dynamics, Tibetan Plateau Broadband Experiment, INDEPTH II, INDEPTH III, INDEPTH IV/ASCENT, HIMNT, Bhutan, Nanga Parbat Pakistan and GHENGIS PASSCAL temporary seismic deployments. We thank IIEES and LGIT for seismic data from Iran and also SEISUK for provision and assistance with instruments operated in northeast India. CN was supported by a Natural Environment Research Council studentship (grant NE/H52449X/1), with CASE funding from AWE Blacknest. We thank Nick Rawlinson and an anonymous reviewer for their constructive and helpful reviews. Figures were prepared with Generic Mapping Tools (GMT) software (Wessel & Smith 1998).