Napus Plants Research Articles

Multiomics dissection of Brassica napus L. lateral roots and endophytes interactions under phosphorus starvation

Many plants associate with endophytic microbes that improve root phosphorus (P) uptake. Understanding the interactions between roots and endophytes can enable efforts to improve P utilization. Here, we characterize the interactions between lateral roots of endophytes in a core collection of 50 rapeseed (Brassica napus L.) genotypes with differing sensitivities to low P conditions. With the correlation analysis result between bacterial abundance and plant physiological indices of rapeseeds, and inoculation experiments on plates and soil, we identify one Flavobacterium strain (C2) that significantly alleviates the P deficiency phenotype of rapeseeds. The underlying mechanisms are explored by performing the weighted gene coexpression network analysis (WGCNA), and conducting genome-wide association studies (GWAS) using Flavobacterium abundance as a quantitative trait. Under P-limited conditions, C2 regulates fatty acid and lipid metabolic pathways. For example, C2 improves metabolism of linoleic acid, which mediates root suberin biosynthesis, and enhances P uptake efficiency. In addition, C2 suppresses root jasmonic acid biosynthesis, which depends on α-linolenic acid metabolism, improving C2 colonization and activating P uptake. This study demonstrates that adjusting the endophyte composition can modulate P uptake in B. napus plants, providing a basis for developing agricultural microbial agents.

Global mRNA profiling reveals the effect of boron as a crop protection tool against Sclerotinia sclerotiorum.

Sclerotinia sclerotiorum, the causal agent of white mould, is a necrotrophic fungal pathogen responsible for extensive crop loss. Current control options rely heavily on the application of chemical fungicides that are becoming less effective and may lead to the development of fungal resistance. In the current study, we used a foliar application of boron to protect Brassica napus (canola) from S. sclerotiorum infection using whole-plant infection assays. Application of boron to aerial surfaces of the canola plant reduced the number of S. sclerotiorum-forming lesions by 87 % compared to an untreated control. Dual RNA sequencing revealed the effect of boron on both the host plant and fungal pathogen during the infection process. Differential gene expression analysis and gene ontology term enrichment further revealed the mode of action of a foliar boron spray at the mRNA level. A single foliar application of boron primed the plant defence response through the induction of genes associated with systemic acquired resistance while an application of boron followed by S. sclerotiorum infection-induced genes associated with defence response-related cellular signalling cascades. Additionally, in S. sclerotiorum inoculated on boron-treated B. napus, we uncovered gene activity in response to salicylic acid breakdown, consistent with salicylic acid-dependent systemic acquired resistance induction within the host plant. Taken together, this study demonstrates that a foliar application of boron results in priming of the B. napus plant defence response, likely through systemic acquired resistance, thereby contributing to increased tolerance to S. sclerotiorum infection.

Overexpression of Nicotiana tabacum PIP1;3 enhances root aeration and oxygen metabolism in canola (Brassica napus) plants exposed to root hypoxia

High mortality and reduced growth due to root hypoxia are commonly observed in plants impacted by flooding or soil compaction.Since earlier research suggested that Nicotiana tabacum PIP1;3 may facilitate cell-to-cell oxygen transport, we overexpressed NtPIP1;3 in canola (Brassica napus) and studied the effects on growth, physiological parameters, root oxygen concentrations, and energy metabolism in plants subjected to waterlogging. Compared with wild-type plants (WT), the waterlogged plants overexpressing NtPIP1;3 (OE) maintained higher dry biomass, gas exchange, root hydraulic conductivity, root oxygen concentrations, leaf water potentials, root respiration rates, and root ATP concentrations.Metabolic profiling revealed that overexpressing plants responded to root hypoxia by altering the glycolysis, pyruvate metabolism, and TCA cycle in roots. Moreover, the differences in expression patterns of RAP2.12, RAP2.2, PCO1, and PCO2 in WT and OE canola plants exposed to root hypoxia point to increased oxygen supply to OE roots, which was confirmed by direct measurements of root O2 concentrations.Our results demonstrate that the overexpression of NtPIP1;3 affected plant responses to hypoxia by enhancing their aerobic metabolism and strengthened the notion that some of the plant aquaporins may facilitate oxygen transport.

Exogenous hydrogen sulfide mitigates potassium deficiency in Brassica napus plants by modulating growth and photosynthetic activity and regulating hydrogen sulfide and nitric oxide biosynthesis

Exogenous hydrogen sulfide mitigates potassium deficiency in Brassica napus plants by modulating growth and photosynthetic activity and regulating hydrogen sulfide and nitric oxide biosynthesis

Bioenergy crop rotation for phytoremediation of heavy metal contaminated soils at Mahd AD'Dahab mine, Kingdom of Saudi Arabia

Phytoremediation is a viable approach in order to mitigate toxic soil levels and, therefore, the associated impacts of HMs. This approach requires the assessment of contaminated sites and the selection of reportedly efficient phytoremediators, which might contribute to facilitating the practical implementation of phytoremediation in polluted soils. In a twelve-month microcosm experiment, Indian mustard (Brassica juncea) and rapeseed (Brassica napus) plants were planted over the winter season. Subsequently, maize (Zea maize) was planted after the harvest of these plants. Oil crop rotation systems might promote tested HM removal (Cu, Cd, Fe, Ni, Mn, Zn, and Pb) from the Mahd AD'Dahab mine-contaminated soil and provide higher biomass than single crops. The results indicated that both the rapeseed maize and Indian mustard maize rotation showed the highest phytoextraction efficiency compared to a single crop. The extraction of Zn, Pb, Ni, Mn, Fe, Cu, and Cd are 18, 27, 29, 24, 23, 24, and 28%, respectively, for Indian mustard-maize rotation, although 17, 27, 31, 24, 21, 23, and 26% respectively for rapeseed-maize rotation. The short rotation strategy could be helpful in landscaped and controlled access to the polluted sites. The utilization of short-rotation phytoremediation has the potential to emerge as a financially viable approach for the management of polluted areas. This method involves enhancing biomass yield through the implementation of phytomanagement techniques such as fertilization, irrigation, and coppicing, thereby capitalizing on the benefits associated with both biomass production and landscape management.

Genome-wide identification and expression analysis of the Nitrile-specifier proteins (NSPs) in Brassica napus

The complete exploitation of Brassica napus plants is a study hotspot, since it is an essential oil crop that is widely cultivated across the world. Glucosinolate is a unique secondary metabolite in the Brassicaceae family, and its content has a substantial influence on rapeseed development and quality. Its degradation products have various physiological functions, among which Nitrile specific proteins (NSPs) can hydrolyze glucosinolate and hence influence the balance of plant immunity and growth. However, the related gene families in B. napus have not been investigated. Here, 72 NSP family members were discovered and described in B. napus based on their sequence structures, physiological correlations, phonological locations, and expression levels. According to collinearity studies, the NSP proteins in B. napus and A. thaliana are closely related. Analysis of BnNSP expression patterns in various tissues revealed that BnNSPs exhibit high tissue specificity, implying that BnNSPs may play distinguish functions in various developmental phases. We discovered that NSPs may be regulated by hormones such as abscisic acid (ABA), gibberellin (GA), and metallic jasmonate (MeJA) based on the expression of NSPs during hormone treatment. The results provide valuable information for the future functional characterization of BnNSP genes.

Over-expression of the BnVIT-L2 gene improves the lateral root development and biofortification under iron stress

The vacuolar iron transporter (VIT) family is responsible for absorbing and storing iron ions in vacuoles. Here, the BnVIT-L2 gene from Brassica napus has been cloned for the first time and was found to be expressed in multiple tissues and organs, induced by iron stress. The BnVIT-L2 protein is located in vacuolar membranes and has the ability to bind both iron and other bivalent metal ions. Over-expression of the BnVIT-L2 gene increased lateral root number and main root length, as well as chlorophyll and iron content in transgenic Arabidopsis plants (BnVIT-L2/At) exposed to iron stress, compared to wild type Col-0. Furthermore, over-expression of this gene improved the adaptability of transgenic B. napus plants (BnVIT-L2-OE) under iron stress. The regulation of plant tolerance under iron stress by BnVIT-L2 gene may involve in the signal of reactive oxygen species (ROS), as suggested by Ribosome profiling sequencing (Ribo-seq). This study provides a reference for investigating plant growth and biofortification under iron stress through the BnVIT-L2 gene.

Development of transgenic Brassica napus plants with AtATM3 gene to enhance cadmium and lead tolerance

Four popular genotypes of Brassica napus, cv. BARI Sarisha-8, BARI Sarisha-13, Binasarisha-4, and Binasarisha-8 were subjected to cadmium (Cd) and lead (Pb) stress to identify a genotype with enhanced tolerance of Cd and Pb. The goal was to use the selected genotype for genetic engineering, thereby improving traits related to heavy metal tolerance and accumulation to remediate polluted agricultural soils. The genotype, BARI Sarisha-8 with superior tolerance to both Cd and Pb stresses, was chosen for genetic engineering with Arabidopsis thaliana ABC transporter of the mitochondrion 3 (AtATM3) gene. The transformation process involved coculturing the cotyledon explants with Agrobacterium strain GV3101 carrying a binary vector containing the hygromycin phosphotransferase (HPT) gene as a selectable marker and the AtATM3 gene. Transformation efficiency was significantly enhanced with a two-day co-cultivation period on shoot induction medium composed of MS medium, α-naphthaleneacetic acid (0.5 mg/L), and 6-benzyladenine (3 mg/L), supplemented with acetosyringone (20 mg/L), along with a four-day delay in exposing the explants to the selective agent hygromycin. Hygromycin-resistant shoots were obtained by employing a three-step selection process. The refined protocol resulted in a transformation efficiency of 15.38%. Polymerase chain reaction (PCR) analysis confirmed the integration of AtATM3 and HPT genes into the host genome in all recombinant plants. Transgenic B. napus plants expressing the AtATM3 gene exhibited notable improvements in tolerance, demonstrating a 1.4- to 1.7fold increase in Cd tolerance and a 1.3- to 1.5-fold increase in Pb tolerance compared to the wild type (nontransformed) under both Cd and Pb stress conditions.

Compositional shifts in rhizobacterial communities of Brassica napus under salinity stress

Salinity stress severely limits crop production globally. The plant rhizosphere harbors diverse microbial communities that can positively influence plant growth and stress tolerance. Therefore, we examined the rhizosphere bacterial populations of Brassica napus under normal and saline conditions using high-throughput 16S rRNA gene sequencing. The objectives were set to identify key taxa enriched in the rhizosphere and evaluate variations in community structure between control and salt-stressed Brassica napus plants. Proteobacteria, Actinobacteria, Chloroflexi, and Bacteroidetes were the predominant phyla. Key genera enriched in the rhizosphere included Sphingomonas, Streptomyces, Bacillus, and Pseudomonas. Salinity stress increased the abundances of Chloroflexi and Acidobacteria while decreased Actinobacteria. Rhizosphere communities of salt-treated plants showed lower diversity but separate clusters from controls, indicating salinity-induced shifts. Predictive functional analysis revealed that amino acid/carbohydrate metabolism and membrane transport pathways in salt-stressed rhizospheres were elevated. This study provides novel insights into the rhizosphere bacteriome of Brassica napus under salinity, highlighting potential plant-growth-promoting taxa for stress amelioration.

BnPLP1 Positively Regulates Flowering Time, Plant Height, and Main Inflorescence Length in Brassica napus.

Protein prenylation mediated by the Arabidopsis thaliana PLURIPETALA (AtPLP) gene plays a crucial role in plant growth, development, and environmental response by adding a 15-carbon farnesyl group or one to two 20-carbon geranylgeranyl groups onto one to two cysteine residues at the C-terminus of the target protein. However, the homologous genes and their functions of AtPLP in rapeseed are unclear. In this study, bioinformatics analysis and gene cloning demonstrated the existence of two homologous genes of AtPLP in the Brassica napus L. genome, namely, BnPLP1 and BnPLP2. Evolutionary analysis revealed that BnPLP1 originated from the B. rapa L. genome, while BnPLP2 originated from the B. oleracea L. genome. Genetic transformation analysis revealed that the overexpression of BnPLP1 in Arabidopsis plants exhibited earlier flowering initiation, a prolonged flowering period, increased plant height, and longer main inflorescence length compared to the wild type. Contrarily, the downregulation of BnPLP1 expression in B. napus plants led to delayed flowering initiation, shortened flowering period, decreased plant height, and reduced main inflorescence length compared to the wild type. These findings indicate that the BnPLP1 gene positively regulates flowering time, plant height, and main inflorescence length. This provides a new gene for the genetic improvement of flowering time and plant architecture in rapeseed.

Unravelling the plant growth promotion potential of the bacterial endophytic microbiota associated with Canola (Brassica napus) plants

Unravelling the plant growth promotion potential of the bacterial endophytic microbiota associated with Canola (Brassica napus) plants

Comparative genomic analyses reveal the genetic basis of the yellow-seed trait in Brassica napus

Yellow-seed trait is a desirable breeding characteristic of rapeseed (Brassica napus) that could greatly improve seed oil yield and quality. However, the underlying mechanisms controlling this phenotype in B. napus plants are difficult to discern because of their complexity. Here, we assemble high-quality genomes of yellow-seeded (GH06) and black-seeded (ZY821). Combining in-depth fine mapping of a quantitative trait locus (QTL) for seed color with other omics data reveal BnA09MYB47a, encoding an R2R3-MYB-type transcription factor, as the causal gene of a major QTL controlling the yellow-seed trait. Functional studies show that sequence variation of BnA09MYB47a underlies the functional divergence between the yellow- and black-seeded B. napus. The black-seed allele BnA09MYB47aZY821, but not the yellow-seed allele BnA09MYB47aGH06, promotes flavonoid biosynthesis by directly activating the expression of BnTT18. Our discovery suggests a possible approach to breeding B. napus for improved commercial value and facilitates flavonoid biosynthesis studies in Brassica crops.

Salicylic acid-mitigates abiotic stress tolerance via altering defense mechanisms in Brassica napus (L.).

Under the changing climate due to global warming, various abiotic stresses including drought (D) and salinity (S) are expected to further trigger their devastating effects on the already vulnerable crop production systems. This experiment was designed to unravel and quantify the potential role of exogenous application of salicylic acid (SA) in mitigating both D and S stresses and their combination (D+S), with three replications using CRD (Completely Randomized Design). The obtained results of the current study demonstrated significant effects of all three types of stresses (D, S, and D+S) on various parameters in Brassica napus plants. Quantifying these parameters provides a more informative and precise understanding of the findings. Current results revealed that all three stress types (D, S, and D+S) resulted in a reduction in leaf area (13.65 to 21.87%), chlorophyll levels (30 to 50%), gaseous exchange rate (30 to 54%) and the concentration of mineral ions compared to non-stressed plants. However, application of SA helped in mitigating these stresses by ameliorating the negative effects of these stresses. Moreover, Malondialdehyde (MDA) contents, an indicator of lipid per-oxidation and oxidative stress, the levels of antioxidants, proline content, an osmolyte associated with stress tolerance, and sugar content in the leaves were elevated in response to all stress conditions. In addition, the ultra-structures within the leaves were negatively affected by the stresses, while an application of SA considerably minimized the deterioration of these structures thus providing protection to the brassica plants against the stresses. In a nutshell, the findings of this study suggest that SA application in S, D and S+ D stresses provides evasion to the plants by improving different physiological and growth indices. The application of Salicylic Acid (SA) mitigated the negative effects of the stresses on all the above parameters, reducing MDA contents (47%), antioxidants (11 to 20%), proline (28%), sugar contents (20.50%), and minimizing the deterioration of ultra-structures. The findings emphasize the potential mitigatory role of SA in mitigating D and S stresses and highlight the need for further research to understand the underlying mechanisms in detail and explore its practical application in farming practices.

Interplay between the Brassica napus phytoglobin (BnPgb1), folic acid, and antioxidant responses enhances plant tolerance to waterlogging

Oxygen deprivation by waterlogging reduces the productivity of several crop species, including the oil-producing crop Brassica napus L., which is highly sensitive to excess moisture. Among factors induced by oxygen deficiency are phytoglobins (Pgbs), heme-containing proteins known to ameliorate the response of plants to the stress. This study examined the early responses to waterlogging in B. napus plants over-expressing or down-regulating the class 1 (BnPgb1) and class 2 (BnPgb2) Pgbs. The depression of gas exchange parameters and plant biomass was exacerbated by the suppression of BnPgb1, while suppression of BnPgb2 did not evoke any changes. This suggests that natural occurring levels of BnPgb1 (but not BnPg2) are required for the response of the plants to waterlogging. Typical waterlogging symptoms, including the accumulation of reactive oxygen species (ROS) and the deterioration of the root apical meristem (RAM) were attenuated by over-expression of BnPgb1. These effects were associated with the activation of antioxidant system and the transcriptional induction of folic acid (FA). Pharmacological treatments revealed that high levels of FA were sufficient to revert the inhibitory effect of waterlogging, suggesting that the interplay between BnPgb1, antioxidant responses and FA might contribute to plant tolerance to waterlogging stress.

BnaWRKY75 positively regulates the resistance against Sclerotinia sclerotiorum in ornamental Brassica napus

With the development of tourism at home and abroad, Rapeseed (Brassica napus) has become an important ornamental plant. However, its ornamental value at the inflorescence stage is greatly reduced by Sclerotinia sclerotiorum. Identification of important genes in the defense responses is critical for molecular breeding, which is an important strategy for controlling the disease. In this study, we isolated a B. napus WRKY transcription factor gene, BnaWRKY75. BnaWRKY75 was found to encode a nucleus-localized protein and exhibited relatively high expression in the stems. Arabidopsis thaliana transgenic plants expressing BnaWRKY75 showed enhanced resistance to S. sclerotiorum, and both ProBnaWRKY75:GUS and gene expression analyses showed that BnaWRKY75 was highly responsive to S. sclerotiorum infection, indicating the involvement of BnaWRKY75 in response to this infection. Furthermore, overexpression (OE) of BnaWRKY75 in B. napus significantly enhanced the resistance to S. sclerotiorum, whereas the resistance was reduced in RNAi transgenic B. napus plants. Moreover, the BnaWRKY75-OE B. napus plants exhibited constitutive activation of salicylic acid-, jasmonic acid-, and ethylene-mediated defense responses and the inhibition of both H2O2 and O2.- accumulation in response to this pathogen. By contrast, BnaWRKY75-RNAi plants showed a reverse pattern, suggesting that BnaWRKY75 is involved in hormonal signaling pathways and in the control of reactive oxygen species accumulation. In conclusion, these data indicate that BnaWRKY75, a regulator of multiple defense responses, positively regulates resistance against S. sclerotiorum, which may guide the improvement of resistance in rapeseed.

Predicting yield traits of individual field-grown Brassica napus plants from rosette-stage leaf gene expression

Predicting yield traits of individual field-grown Brassica napus plants from rosette-stage leaf gene expression

Drought-free future climate conditions enhance cadmium phytoremediation capacity by Brassica napus through improved physiological status

This study aimed to assess Cd phytoextraction efficiency in well-watered and drought-stressed B. napus plants under current climate (CC, 21/14 °C, 400 ppm CO2) and future climate (FC, 25/18 °C, 800 ppm CO2) conditions. The underlying physiological mechanisms underpinning the obtained results were investigated by studying Cd (1, 10, 50, and 100 mg kg−1) effect on B. napus photosynthetic performance and nutritional status. Only the Cd-50 and Cd-100 treatments caused visible leaf lesions, growth retardation, reductions in both gas exchange and chlorophyll fluorescence-related parameters, and disturbed mineral nutrient balance. Under CC conditions, well-watered plants were affected more than under FC conditions. The most important pathway by which Cd affected B. napus photosynthetic efficiency in well-watered plants was the damage to both photosystems, lowering photosynthetic electron transport. Meanwhile, non-stomatal and stomatal limitations were responsible for the higher reduction in the photosynthetic rate (Pr) of drought-stressed compared to well-watered plants. The significantly higher shoot dry weight, which had a strong positive relationship with Pr, was the main factor determining significantly higher shoot Cd accumulation in high Cd treatments in well-watered plants under FC conditions, resulting in a 65% (p < 0.05) higher soil Cd removal rate in the Cd-50 treatment.

Localization and chemical speciation of europium(III) in Brassica napus plants

For the reliable safety assessment of repositories of highly radioactive waste, further development of the modelling of radionuclide migration and transfer in the environment is necessary, which requires a deeper process understanding at the molecular level. Eu(III) is a non-radioactive analogue for trivalent actinides, which contribute heavily to radiotoxicity in a repository. For in-depth study of the interaction of plants with trivalent f elements, we investigated the uptake, speciation, and localization of Eu(III) in Brassica napus plants at two concentrations, 30 and 200 µM, as a function of the incubation time up to 72 h. Eu(III) was used as luminescence probe for combined microscopy and chemical speciation analyses of it in Brassica napus plants. The localization of bioassociated Eu(III) in plant parts was explored by spatially resolved chemical microscopy. Three Eu(III) species were identified in the root tissue. Moreover, different luminescence spectroscopic techniques were applied for an improved Eu(III) species determination in solution. In addition, transmission electron microscopy combined with energy-dispersive X-ray spectroscopy was used to localize Eu(III) in the plant tissue, showing Eu-containing aggregates. By using this multi-method setup, a profound knowledge on the behavior of Eu(III) within plants and changes in its speciation could be obtained, showing that different Eu(III) species occur simultaneously within the root tissue and in solution.

Brassica napus Plants Gain Improved Salt-Stress Tolerance and Increased Storage Oil Biosynthesis by Interfering with CRL3BPM Activities

Generating new strategies to improve plant performance and yield in crop plants becomes increasingly relevant with ongoing and predicted global climate changes. E3 ligases that function as key regulators within the ubiquitin proteasome pathway often are involved in abiotic stress responses, development, and metabolism in plants. The aim of this research was to transiently downregulate an E3 ligase that uses BTB/POZ-MATH proteins as substrate adaptors in a tissue-specific manner. Interfering with the E3 ligase at the seedling stage and in developing seeds results in increased salt-stress tolerance and elevated fatty acid levels, respectively. This novel approach can help to improve specific traits in crop plants to maintain sustainable agriculture.

Molecular Identification of Endophytic Bacteria from Silybum marianum and Their Effect on Brassica napus Growth under Heavy Metal Stress

Silybum marianum has been used for a variety of purposes all over the world. This plant is used to treat cancer, liver disease, and inflammation. Eleven endophytic bacteria were isolated from S. marianum collected from heavy metal polluted sites and identified using 16s rRNA sequencing in the current investigation. Three isolates stood out for having many features, including heavy metal resistance, plant growth stimulation, plant hormones, heavy metal toxicity remediation, and antibacterial action. SJLC (6.06 µg/L) and SJRB (5.98 µg/L) were the greatest producers of IAA among the isolates and were identified as Bacillus sp. and Lysinibacillus sp., respectively. Root and shoot length have improved as a result of IAA production. The SJLC was found to be effective against four of the pathogens tested. The strain SJLC showed the most activity against Bacillus cereus with a 20 mm zone of inhibition, followed by the isolate SJRB, which showed a 16 mm zone of inhibition against B. cereus. The same isolates also show inhibition against X. campestris. Almost majority of the Brassica napus plants inoculated with bacterial isolates were able to translocate and degrade heavy metals like Cr. Therefore, it was concluded that these isolates are capable to grow in highly polluted environments.