Multiple Life Stages Research Articles

Microbiomes of the Sydney Rock Oyster are acquired through both vertical and horizontal transmission

BackgroundThe term holobiont is widely accepted to describe animal hosts and their associated microorganisms. The genomes of all that the holobiont encompasses, are termed the hologenome and it has been proposed as a unit of selection in evolution. To demonstrate that natural selection acts on the hologenome, a significant portion of the associated microbial genomes should be transferred between generations. Using the Sydney Rock Oyster (Saccostrea glomerata) as a model, we tested if the microbes of this broadcast spawning species could be passed down to the next generation by conducting single parent crosses and tracking the microbiome from parent to offspring and throughout early larval stages using 16S rRNA gene amplicon sequencing. From each cross, we sampled adult tissues (mantle, gill, stomach, gonad, eggs or sperm), larvae (D-veliger, umbo, eyed pediveliger, and spat), and the surrounding environment (water and algae feed) for microbial community analysis.ResultsWe found that each larval stage has a distinct microbiome that is partially influenced by their parental microbiome, particularly the maternal egg microbiome. We also demonstrate the presence of core microbes that are consistent across all families, persist throughout early life stages (from eggs to spat), and are not detected in the microbiomes of the surrounding environment. In addition to the core microbiomes that span all life cycle stages, there is also evidence of environmentally acquired microbial communities, with earlier larval stages (D-veliger and umbo), more influenced by seawater microbiomes, and later larval stages (eyed pediveliger and spat) dominated by microbial members that are specific to oysters and not detected in the surrounding environment.ConclusionOur study characterized the succession of oyster larvae microbiomes from gametes to spat and tracked selected members that persisted across multiple life stages. Overall our findings suggest that both horizontal and vertical transmission routes are possible for the complex microbial communities associated with a broadcast spawning marine invertebrate. We demonstrate that not all members of oyster-associated microbiomes are governed by the same ecological dynamics, which is critical for determining what constitutes a hologenome.

Carryover effects of pesticide exposure and pond drying on performance, behavior, and sex ratios in a pool breeding amphibian

AbstractNeonicotinoid pesticides are widely used to combat agricultural and forest pests, yet the extent of their biological effects and synergies with other stressors is not well understood, particularly for species with complex life cycles such as amphibians. While there is extensive research on the impacts of agricultural chemicals on amphibians (particularly larval stage), research on the effects of the new class of widely used neonicotinoid pesticides across life stages is lacking. In this study, we used aquatic mesocosm manipulations and terrestrial locomotor and behavior trials to evaluate demographic, behavioral, and fitness carryover effects of sublethal neonicotinoid pesticide (imidacloprid) exposure and hydroperiod length on the wood frog (Rana sylvatica), a model organism. We found that the interaction of imidacloprid exposure and shorter hydroperiod led to decreased larval survival to metamorphosis (0.54 ± 0.14, compared to control 0.75 ± 0.04). When exposed to their thermal optimum (18°C), individuals exposed to imidacloprid as larvae had higher terrestrial locomotor performance (284.08 ± 28.62 body lengths traveled) but also experienced the largest decreases in performance (147.88 ± 19.27 fewer body lengths traveled) after terrestrial imidacloprid exposure. In a 48‐h substrate choice experiment, post‐metamorphic frogs did not show behavioral avoidance of imidacloprid‐treated substrates. Finally, we observed a skewed juvenile sex ratio from imidacloprid treatments (~10% fewer males compared to control), and we were not able to assign 15.7% of individuals from imidacloprid treatments to either sex due to ambiguous reproductive organ morphology. Our empirical assessment of carryover effects of chemical exposure and pond drying provides insights into the physiological capacity of taxa with complex lifecycles to respond to contaminants experienced at multiple life stages and informs best practices for neonicotinoid pesticide use in forest settings and conservation strategies for pond‐breeding amphibians.

Not all management is equal: a comparison of methods to increase wood turtle population viability

AbstractManagement generally targets the most tractable life stage to rescue declining populations; however, that stage may not have the largest influence on recovery. Freshwater turtles are declining globally and early stages are frequently targeted for management, although the effectiveness of these actions on population growth are relatively unknown because of incomplete demographic data. We estimated the hatchling yearly survival rate for a freshwater turtle in the field usingin situenclosures to collect missing demographic information. We used these data to develop demographic models to calculate growth rate for a hypothetical, declining population of wood turtles (Glyptemys insculpta) in Wisconsin, USA, 2014–2019. We modeled growth for populations across a range of scenarios from no management to combinations of nest protection and head‐starting at varying levels of effort. Nest protection alone did not increase population growth rate, while head‐starting alone increased population growth by 0.07, with the largest increase in growth rate, 0.11, resulting from combinations of both approaches. No combination of nest protection and head‐starting, without an increase in adult survival rate from the observed 0.88 to ≥0.95, led to population stabilization or increase. Populations of freshwater turtles, like the wood turtle, will likely only recover with a multi‐faceted approach that targets multiple life stages simultaneously.

Evaluation of Long-term Outcomes Associated With Preterm Exposure to Antenatal Corticosteroids

Animal studies have found that antenatal corticosteroids affect many organs across multiple stages of life. However, the long-term outcomes in human children are not well understood. To conduct a systematic review and meta-analysis of long-term outcomes associated with preterm exposure to antenatal corticosteroids compared with no exposure in all children as well as children with preterm and full-term birth. Academic databases were searched for articles published from January 1, 2000, to October 29, 2021, including Ovid MEDLINE, Ovid Embase, PsycInfo, CINAHL (Cumulative Index of Nursing and Allied Health Literature), Web of Science, ClinicalTrials.gov, and Google Scholar. References of articles were also searched for relevant studies. Randomized clinical trials (RCTs), quasi-RCTs, and cohort studies that assessed long-term neurodevelopmental, psychological, or other outcomes at 1 year or older in those who had preterm exposure to antenatal corticosteroids were included. No language restrictions were set. Two reviewers independently extracted data using a piloted data extraction form. Data on study population, pregnancy characteristics, exposure to antenatal corticosteroids, and outcomes were collected. Preferred Reporting Items for Systematic Reviews and Meta-analyses reporting guidelines were followed, and random-effects models were used for the meta-analysis. The primary outcome was an author-defined composite of any adverse neurodevelopmental and/or psychological disorder. The secondary outcomes included specific measures of psychological disorders; neurodevelopmental delay; and anthropometric, metabolic, and cardiorespiratory outcomes. A total of 30 studies met the inclusion criteria, and involved more than 1.25 million children who were at least 1 year of age when the outcomes were assessed. Exposure to a single course of antenatal corticosteroids for children with extremely preterm birth was associated with a significant reduction in risk of neurodevelopmental impairment (adjusted odds ratio, 0.69 [95% CI, 0.57-0.84]; I2 = 0%; low certainty). For children with late-preterm birth, exposure to antenatal corticosteroids was associated with a higher risk of investigation for neurocognitive disorders (n = 25 668 children; adjusted hazard ratio [aHR], 1.12 [95% CI, 1.05-1.20]; low certainty). For children with full-term birth, exposure to antenatal corticosteroids was associated with a higher risk of mental or behavioral disorders (n = 641 487 children; aHR, 1.47 [95% CI, 1.36-1.60]; low certainty) as well as proven or suspected neurocognitive disorders (n = 529 205 children; aHR, 1.16 [95% CI, 1.10-1.21]; low certainty). Results of this study showed that exposure to a single course of antenatal corticosteroids was associated with a significantly lower risk of neurodevelopmental impairment in children with extremely preterm birth but a significantly higher risk of adverse neurocognitive and/or psychological outcomes in children with late-preterm and full-term birth, who made up approximately half of those with exposure to antenatal corticosteroids. The findings suggest a need for caution in administering antenatal corticosteroids.

Sampling multiple life stages significantly increases estimates of marine biodiversity.

Biodiversity assessments are critical for setting conservation priorities, understanding ecosystem function and establishing a baseline to monitor change. Surveys of marine biodiversity that rely almost entirely on sampling adult organisms underestimate diversity because they tend to be limited to habitat types and individuals that can be easily surveyed. Many marine animals have planktonic larvae that can be sampled from the water column at shallow depths. This life stage often is overlooked in surveys but can be used to relatively rapidly document diversity, especially for the many species that are rare or live cryptically as adults. Using DNA barcode data from samples of nemertean worms collected in three biogeographical regions—Northeastern Pacific, the Caribbean Sea and Eastern Tropical Pacific—we found that most species were collected as either benthic adults or planktonic larvae but seldom in both stages. Randomization tests show that this deficit of operational taxonomic units collected as both adults and larvae is extremely unlikely if larvae and adults were drawn from the same pool of species. This effect persists even in well-studied faunas. These results suggest that sampling planktonic larvae offers access to a different subset of species and thus significantly increases estimates of biodiversity compared to sampling adults alone. Spanish abstract is available in the electronic supplementary material.

Spatial zoning to conserve fish species with complex life cycles in estuaries

Fish conservation in estuaries is complex because there are diverse social values and interests associated with estuarine ecosystems and multiple ecological processes (e.g., nursery, connectivity, and population dynamics). Furthermore, ontogenetic shift has an important role in determining fish habitat use (e.g. pelagic vs benthic environments), and consequently, critical implications for conservation. Here, we develop a prioritisation approach to create conservation zones in an estuarine system that considers fishery costs while also integrating pelagic and benthic habitats for different life history stages (from eggs to adults), and multiple conservation objectives. We applied our approach to the whitemouth croaker Micropogonias furnieri in the Patos Lagoon estuary (Brazil) and tested four scenarios based on different objectives, zone types and targets. In this study, we used Marxan and Marxan with Zones and accounted for 41 conservation features (including habitat type, vegetation and seasonal distribution of whitemouth croaker within the estuary). Overall, we found two important results. First, spatial priorities for the no-take and partially protected zones did not change substantially and were very robust to variation in uncertain parameters. Second, an integrated conservation plan with multiple zones requires less area to be designated as no-take zone than a traditional conservation plan with a single zone. A well-designed conservation plan based on multiple life stages may help to ensure the recruitment, persistence and management of important estuarine resources.

In search of continuity with the past: Houshang Seyhoun’s Ferdowsi mausoleum complex as cultural landscape

ABSTRACT Architecture is the meeting point of development, culture, and the environment. Development usually challenges traditions and leads to environmental and cultural concerns. In the 1970s public architecture in Iran played a significant role in re-imagining a national cultural landscape. The paper examines the Beaux Arts-trained architect Houshang Seyhoun’s (1964–68) design for the reconstructed mausoleum of Ferdowsi, the Iranian national poet. The design consisted of an interpretative gallery, tea-house, and performance space as well as an adjacent restaurant. This was one of the many public projects that went through multiple stages of life from the time of its conception through to the Islamic Revolution, which substantially transformed its social and political context leading to the present. The paper attempts to show the divergent political forces that operate on perceptions of a cultural landscape at a national scale.

Multi‐scale patterns in the occurrence of an ephemeral pool‐breeding amphibian

AbstractSpecies distributions are governed by processes occurring at multiple spatial scales. For species with complex life cycles, the needs of all life stages must be met within the dispersal limitations of the species. Multi‐scale processes can be particularly important for these species, where small‐scale patterns in specific habitat components can affect the distribution of one life stage, whereas large‐scale patterns in land cover might better explain the distribution of other life stages. Using a conditional multi‐scale model, we evaluated which aspects of the landscape and local environment are most strongly related to occupancy patterns of western spadefoots (Spea hammondii). In northern and central California, the proportion of grassland land cover within 2 km of a site was positively related to the occurrence of the northern clade of the western spadefoot. At the pond scale, we found that western spadefoots were more likely to breed in pools with lower pH. Our results indicate that protecting remaining grasslands for adult spadefoots and ensuring multiple pools with diverse characteristics and hydroperiods so at least some pools result in successful breeding will likely be necessary to conserve western spadefoots, especially with a changing climate. Considering the processes that affect species distributions at multiple life stages and spatial scales is an essential component of effective conservation.

Developmental Regulation and Functional Prediction of microRNAs in an Expanded Fasciola hepatica miRNome.

The liver fluke, Fasciola hepatica, is a global burden on the wellbeing and productivity of farmed ruminants, and a zoonotic threat to human health. Despite the clear need for accelerated discovery of new drug and vaccine treatments for this pathogen, we still have a relatively limited understanding of liver fluke biology and host interactions. Noncoding RNAs, including micro (mi)RNAs, are key to transcriptional regulation in all eukaryotes, such that an understanding of miRNA biology can shed light on organismal function at a systems level. Four previous publications have reported up to 89 mature miRNA sequences from F. hepatica, but our data show that this does not represent a full account of this species miRNome. We have expanded on previous studies by sequencing, for the first time, miRNAs from multiple life stages (adult, newly excysted juvenile (NEJ), metacercariae and adult-derived extracellular vesicles (EVs)). These experiments detected an additional 61 high-confidence miRNAs, most of which have not been described in any other species, expanding the F. hepatica miRNome to 150 mature sequences. We used quantitative (q)PCR assays to provide the first developmental profile of miRNA expression across metacercariae, NEJ, adult and adult-derived Evs. The majority of miRNAs were expressed most highly in metacercariae, with at least six distinct expression clusters apparent across life stages. Intracellular miRNAs were functionally analyzed to identify target mRNAs with inversely correlated expression in F. hepatica tissue transcriptomes, highlighting regulatory interactions with key virulence transcripts including cathepsin proteases, and neuromuscular genes that control parasite growth, development and motility. We also linked 28 adult-derived EV miRNAs with downregulation of 397 host genes in F. hepatica-infected transcriptomes from ruminant lymph node, peripheral blood mononuclear cell (PBMC) and liver tissue transcriptomes. These included genes involved in signal transduction, immune and metabolic pathways, adding to the evidence for miRNA-based immunosuppression during fasciolosis. These data expand our understanding of the F. hepatica miRNome, provide the first data on developmental miRNA regulation in this species, and provide a set of testable hypotheses for functional genomics interrogations of liver fluke miRNA biology.

Exploring Trends in Abundance of Young‐of‐the‐Year and Age‐1 Atlantic Croaker, Black Drum, Spot, and Weakfish in Relation to Salinity, Temperature, and Large‐Scale Climatic Signals in a Mid‐Atlantic Estuary

AbstractAtlantic Croaker Micropogonias undulatus, Black Drum Pogonias cromis, Spot Leiostomus xanthurus, and Weakfish Cynoscion regalis have shown species‐specific, varying trends in abundance despite general declines in commercial landings throughout the Delaware River estuary. Identifying how environmental factors and climatic processes affect fishes at multiple life stages is needed to enhance the precision of regulatory actions for managed species. Species‐, area‐, and age‐specific indices were compared with depth, salinity, temperature, the Atlantic Multidecadal Oscillation (AMO), and the North Atlantic Oscillation (NAO) to explore potential relationships as well as temporal and spatial parameters. Our results demonstrate that station (15 indices), salinity (14 indices), the AMO and NAO (13 indices each), and depth and temperature (12 indices each) served as important components for models of abundance for 17 species‐, age‐, and area‐specific combinations from 1991 to 2016. Significant time series trends were detected in six of the modeled indices of abundance, including baywide indices of age‐1 Weakfish (decline) and age‐0 Atlantic Croaker (increase); age‐0 Atlantic Croaker (increase) and Weakfish (decline) in Delaware; and age‐1 Spot (decline) and Weakfish (increase) in Delaware. Our results demonstrate how multiple fixed‐station surveys can be combined to quantitatively assess environmental and climatic effects correlated with species‐, age‐, and area‐specific levels of abundance, suggesting that climatic signals are affecting smaller‐scale environmental variables that in turn affect relative abundance.

Predicting year class strength for climate-stressed gadid stocks in the Gulf of Alaska

Climate change makes fish stocks more vulnerable to recruitment failure, and early detection of these events is important for an effective management response. Here, we evaluate the value of larval and juvenile surveys, and a thermal spawning habitat index, for predicting recruitment in two economically important gadids, walleye pollock (Gadus chalcogrammus) and Pacific cod (G. macrocephalus), in the Gulf of Alaska. These stocks have been exposed to rapid human-induced ocean warming since 2014, which has apparently contributed to anomalies in age structure, size at age, and other population variables (for pollock) and stock collapse (for cod). We found that warming results in recruitment that falls short of predictions from historical spawner-recruit relationships for both stocks, highlighting that climate change makes recruitment expectations based on historical experience less reliable. However, we also found that recruitment could be successfully predicted with surveys of early-life stages. Using Bayesian regression, we found that juvenile trawl survey data for pollock predicts recruitment to age-1 (as estimated by a stock assessment model), while prediction from larval surveys was less successful. Beach seine estimates of juvenile abundance also predicted pollock recruitment, a surprising result for a species that is typically sampled in offshore habitats. The spawning habitat index and beach seine survey both predicted cod recruitment to age-3 as estimated by the stock assessment model. We did not find a predictive relationship between cod larval abundance and recruitment. However, residuals from the larval model showed low-frequency variability, suggesting nonstationarity (time-dependence) in the predictive relationship. Dynamic Factor Analysis (DFA) models summarizing information across multiple data sets showed reasonable predictive value for both species (Bayesian R2 ≈ 0.4 for log recruitment), and they also allowed recruitment prediction for years with missing observations in some data sets. We conclude that surveying multiple early life stages may be the most useful approach for predicting gadid recruitment.

Selection of predictor variables for species distribution models: a case study with an invasive marine bryozoan.

Species distribution models (SDMs) are important tools for predicting the occurrence and abundance of organisms in space and time, with numerous applications in ecology. However, the accuracy and utility of SDMs can be compromised when predictor variables are selected without careful consideration of their ecophysiological relevance to the focal organism. We conducted an in-depth examination of the variable selection process by evaluating predictors to be used in SDMs for Membranipora membranacea, an ecologically significant marine invasive species with a complex lifecycle, as a case study. Using an information-theoretic and multi-model inference approach based on generalized linear mixed models, we assessed multiple environmental variables (depth, kelp density, kelp substrate, temperature, and wave exposure) as predictors of the abundance of multiple life stages of M. membranacea, investigating species-environment relationships and relative and absolute variable importance. We found that the relative importance of a predictor, the metric calculated to represent a predictor, and whether a predictor was proximal or distal were important considerations in the variable selection process. Data constraints (e.g. sample size, characteristics of available predictor data) may inhibit accurate assessment of predictor variables during variable selection. Importantly, our results suggest that species-environment relationships derived from small-scale studies can inform variable selection for SDMs at larger spatiotemporal scales. We developed a conceptual framework for variable selection for SDMs which can be applied to most contexts of species distribution modelling, but particularly those with several candidate predictors and a large dataset.

Early life adversity, reproductive history and breast cancer risk.

Background and objectivesIndividuals who experience early life adversity are at an increased risk for chronic disease later in life. Less is known about how early life factors are associated with cancer susceptibility. Here, we use a life history framework to test whether early life adversity increases the risk of breast cancer. We predict that early life adversity can shift investment in somatic maintenance and accelerate the timing of reproduction, which may mediate or interact with the risk of breast cancer.MethodologyWe use population-wide data from the Utah Population Database (UPDB) and Utah Cancer Registry, leading to 24 957 cases of women diagnosed with breast cancer spanning 20 years (1990–2010) and 124 785 age-matched controls. We generated a cumulative early life adversity summation score to evaluate the interaction (moderation) and mediation between early life adversity, reproductive history and their association with breast cancer risk.ResultsOur analyses led to three key findings: (i) more early life adversity, when considered as a main effect, accelerates the time to first birth and death, (ii) early age at first birth and high parity decreases the risk of breast cancer and (iii) we find no association between early adversity and breast cancer risk either as a main effect or in its interaction with reproductive history.Conclusion and implicationsEarly adversity elevates the risk of overall mortality through mechanisms other than breast cancer risk. This suggests early life factors can generate different effects on health. Future work should incorporate more complex view of life history patterns, including multiple life stages, when making predictions about cancer susceptibility.

Quantification of thermal impacts across freshwater life stages to improve temperature management for anadromous salmonids.

Water temperature is the major controlling factor that shapes the physiology, behaviour and, ultimately, survival of aquatic ectotherms. Here we examine temperature effects on the survival of Chinook salmon (Oncorhynchus tshawytscha), a species of high economic and conservation importance. We implement a framework to assess how incremental changes in temperature impact survival across populations that is based on thermal performance models for three freshwater life stages of Chinook salmon. These temperature-dependent models were combined with local spatial distribution and phenology data to translate spatial–temporal stream temperature data into maps of life stage-specific physiological performance in space and time. Specifically, we converted temperature-dependent performance (i.e. energy used by pre-spawned adults, mortality of incubating embryos and juvenile growth rate) into a common currency that measures survival in order to compare thermal effects across life stages. Based on temperature data from two abnormally warm and dry years for three managed rivers in the Central Valley, California, temperature-dependent mortality during pre-spawning holding was higher than embryonic mortality or juvenile mortality prior to smolting. However, we found that local phenology and spatial distribution helped to mitigate negative thermal impacts. In a theoretical application, we showed that high temperatures may inhibit successful reintroduction of threatened Central Valley spring-run Chinook salmon to two rivers where they have been extirpated. To increase Chinook salmon population sizes, especially for the threatened and declining spring-run, our results indicate that adults may need more cold-water holding habitat than currently available in order to reduce pre-spawning mortality stemming from high temperatures. To conclude, our framework is an effective way to calculate thermal impacts on multiple salmonid populations and life stages within a river over time, providing local managers the information to minimize negative thermal impacts on salmonid populations, particularly important during years when cold-water resources are scarce.

Zebrafish Behavioral Assays in Toxicology.

Zebrafish behavioral assays are commonly used to identify and study environmental stressors that elicit adverse effects on neurobehavior. Behavioral assay platforms are available for multiple life stages (embryonic, juvenile, and adults) and are robust in detecting stressor-induced acute effects on neurodevelopment as well as long term deficits in sensory mechanisms, social behavior, learning, memory, and neurodegenerative diseases. Within this chapter, we present an overview of zebrafish behavioral assays that are commonly used to study environmental neurotoxicants.

Stable isotopes unravel the feeding mode-trophic position relationship in trematode parasites.

Stable isotopes have been sporadically used over the last two decades to characterise host-parasite trophic relationships. The main reason for this scarcity is the lack of an obvious pattern in the ratio of nitrogen stable isotope values (δ15 N) of parasites in comparison to their host tissues, which would be key to understand any host-parasite system dynamics. To circumvent this, we focused on a single snail host, Zeacumantus subcarinatus, and three of its trematode parasites. We used stable isotopes to investigate each host-trematode trophic relationship and shed light on the mechanisms utilised by the parasite to reroute its hosts' biomass. All our trematodes were found to be 15 N-enriched compared to their host, with their δ15 N values strongly related to their feeding behaviours: passive versus active. It was possible to 'rank' these parasite species and assess their 'relative' trophic position using δ15 N values. We also demonstrated that including a broader range of samples (e.g. host food and faeces, multiple parasite life stages) helped understand the metabolic mechanisms used by the various participants, and that using carbon stable isotope values and C:N ratios allowed to identify an important lipid requirement of these trematode parasites. Finally, we show how critical it is to not ignore parasitic infections as they can have a great influence on their host's trophic position. We have shown that by focussing on a single host species and a single taxonomic group of parasites, we can remove a certain amount of variation recorded by broader isotope studies. We hope that these data will ultimately improve our ability to place parasites in food webs, and thus improve our understanding of the connections and interactions that dictate food web dynamics.

Initiating and upscaling mussel reef establishment with life cycle informed restoration: Successes and future challenges

Worldwide, coastal ecosystems are rapidly degrading in quality and extent. While novel restoration designs include facilitation to enhance restoration success in stressful environments, they typically focus on a single life-stage, even though many organisms go through multiple life-stages accompanied by different bottlenecks. A new approach – life cycle informed restoration – was designed to ameliorate multiple bottlenecks throughout an organism's life cycle. It has successfully been tested on a small scale to facilitate intertidal bivalve reef formation in the Netherlands and Florida. Yet, it remains unknown whether this approach can be scaled to ecosystem-relevant scales. To test whether life cycle informed restoration is upscalable, we conducted a large-scale restoration experiment using blue mussel reefs as a model system. In our experiment, we used biodegradable structures to temporarily facilitate mussel reef formation by providing early-life settlement substrates, and subsequently, reduce post-settlement predation on an intertidal flat in the Wadden Sea, the Netherlands. The structures were placed in 10 × 20 m plots, mimicking bands found in natural mussel beds, spread out across 650 m, and were followed for two years. Our results show that the structures enhance mussel biomass (0.7 ± 0.2 kg DW m−2), as mussels were absent in bare plots. However, biomass varied within plots; in intact structures it was 60 times higher (1.2 ± 0.2 kg DW m−2) than in those that became buried (0.02 ± 0.009 kg DW m−2). Next to burial, 18–46% of the structures were lost due to technical failure, especially during winters at this exposed site. We show that the life cycle informed restoration principle works, but we encountered technical challenges due to larger scale processes (e.g. sedimentation). Furthermore, environmental information is essential for site selection, and for restoration, the functioning of such structures should be tested under extreme conditions before upscaling.

Experimental validation of otolith-based age and growth reconstructions across multiple life stages of a critically endangered estuarine fish.

BackgroundThe application of otolith-based tools to inform the management and conservation of fishes first requires taxon- and stage-specific validation. The Delta Smelt (Hypomesus transpacificus), a critically endangered estuarine fish that is endemic to the upper San Francisco Estuary (SFE), California, United States, serves as a key indicator species in the SFE; thus, understanding this species’ vital rates and population dynamics is valuable for assessing the overall health of the estuary. Otolith-based tools have been developed and applied across multiple life stages of Delta Smelt to reconstruct age structure, growth, phenology, and migration. However, key methodological assumptions have yet to be validated, thus limiting confidence in otolith-derived metrics that are important for informing major water management decisions in the SFE.MethodsUsing known-age cultured Delta Smelt and multiple independent otolith analysts, we examined otolith formation, otolith-somatic proportionality, aging accuracy and precision, left-right symmetry, and the effects of image magnification for larval, juvenile, and adult Delta Smelt.ResultsOverall, otolith size varied linearly with fish size (from 10–60 mm), explaining 99% of the variation in fish length, despite a unique slope for larvae < 10 mm. Otolith-somatic proportionality was similar among wild and cultured specimens. Aging precision among independent analysts was 98% and aging accuracy relative to known ages was 96%, with age estimates exhibiting negligible differences among left and right otoliths. Though error generally increased with age, percent error decreased from 0–30 days-post-hatch, with precision remaining relatively high (≥ 95%) thereafter. Increased magnification (400×) further improved aging accuracy for the oldest, slowest-growing individuals. Together, these results indicate that otolith-based techniques provide reliable age and growth reconstructions for larval, juvenile, and adult Delta Smelt. Such experimental assessments across multiple developmental stages are key steps toward assessing confidence in otolith-derived metrics that are often used to assess the dynamics of wild fish populations.

Early life course processes leading to educational and economic attainment in young adulthood: Contributions of early socioeconomic adversity and education polygenic score.

The present study investigated an integrated life course model, drawn from the life course theoretical perspective, to elucidate youth’s additive, cascading, and cumulative life course processes stemming from early socioeconomic adversity and education polygenic score (education PGS) as well as potential interactions between them (GxE), which contribute to subsequent young adult socioeconomic outcomes. Additionally, the independent, varying associations among social and genetic predictors, life-stage specific educational outcomes (educational achievement in adolescence and educational attainment, in later stages), and young adult economic outcomes were examined. The study used prospective, longitudinal data from the National Longitudinal Study of Adolescent and Adult Health (Add Health) with a sample of 5,728 youth of European ancestry. Early family socioeconomic adversity and individual education PGS were associated with life stage-specific educational outcomes through additive and cascading processes linked to young adults’ economic outcomes (personal earnings) through a cumulative process. A GxE moderation existed between individuals’ education PGS and early socioeconomic adversity at multiple life stages, explaining variation in adolescent educational outcomes. Both early socioeconomic adversity and education PGS were persistently associated with youth’s educational and economic outcomes throughout the early life course. In sum, the findings based on the integrated life course model showed how additive, cascading, and cumulative processes were related and conditioned one another, generating specific life course patterns and outcomes. The findings highlight the value of incorporating molecular genetic information into longitudinal developmental life course research and provide insight into malleable characteristics and appropriate timing for interventions addressing youth developmental characteristics.

Facultative seed predators drive community-level indirect effects of mast seeding

Mast seeding is a resource pulse that is thought to be a strategy in plants to satiate obligate seed predators. Behavioral responses of facultative consumers receive less attention in mast seeding studies despite evidence that they may be more important to community-level indirect effects. We designed an acorn addition experiment to test the hypothesis that mast seeding in oaks (Quercus spp.) generates indirect effects on the plant community by generating a behavioral response in white-tailed deer (Odocoileus virginianus)—the largest herbivore in the ecosystem and a facultative seed predator. Deer activity at masting trees increased substantially for months following acorn addition. Deer may require multiple dietary sources to satisfy energetic and nutritional demands and are consumers of oaks at multiple life stages. As such, acorn addition generated opposite density-dependent effects on seeds and seedlings. In acorn addition plots, we documented increased seed survival but decreased growth of oak seedlings relative to a common competitor. Importantly, acorn additions also resulted in different local plant assemblages than those at non-masting parent trees, which suggests that beta diversity may increase with localized variation in herbivory pressure. Overall, our results indicate that oaks may promote coexistence in the plant community by modulating spatiotemporal variation in herbivory pressure. These results highlight the important role of facultative consumers in linking resource pulses to the broader community.