Evolutionary game theory specifically refers to the fact that today we no longer regard the traditional human model as a super rational player, but ascribe the outcome of human beings reaching the game balance to the fact that human beings seek the right method from the wrong through continuous trial and error. In the traditional control theory and the modern control theory, it is very difficult to establish the model for some systems which are described and summarized by the laws of physics or mathematics, and which have many influencing factors and are coupled with each other. With the continuous progress of science and technology, the application of computer data control system in many fields is more and more extensive, and based on the continuous advancement of modernization, the dependence on computer data control system is also constantly improving. Optimizing the computer data control system can not only greatly save time, but also improve the working efficiency of the group, thus increasing the benefits of the enterprise. In this paper, from the optimization control of computer data system as the analysis goal, through the study of evolutionary game theory and the analysis of multi-valued logic dynamic system, and then combined with the optimization control of computer data, this problem is discussed and analyzed from multiple aspects.