The brown rat, Rattus norvegicus, is a model system in ecological and systematic science, but little is known about its skull morphology and developmental patterns. Our objective was to investigate the cranial ontogenetic patterns in the brown rats, from Hai’l, Kingdom of Saudi Arabia.Quantitative analysis of sexual shape dimorphisms (SShD) and age-classes were investigated using 28 landmarks plotted on two-dimensional images for dorsal and ventral views. Our results detected statistically significant sexual dimorphism (P-value <0.0001) in cranial shape and size for R. norvegicus. Nevertheless, males are much larger than females and display variation around the brain-case, while females tend to show greater variation around the occipital bone. In addition, there are subtle age-classes during ontogeny in the skull. However, the older age classes (i.e. age classes 3 and 4) represent well-built crania with an extended case of the brain and shortest nasal, while youngest specimens represent an elongated snout of minimum crania.Future GMM research should therefore examine the pre-defined age-classes and sex-related individuals in brown rat skulls in relation to genotype to characterize trends in skull shape variation that may affect teeth, zygomatic arches, brain case, and compartments of muscle attachments through its ecological patterns.