Design Of Monitoring Programs Research Articles

Latitudinal cline in weapon allometry and phenology of the European stag beetle

Animal body size commonly exhibits a remarkable variation in response to environmental conditions. Latitude, when correlated with temperature, rainfall and seasonality, represents one of the main determinants of variation in body size, as well as in allometry. It has long been recognised that populations of larger body size are found in colder environments (Bergmann’s Rule), a cornerstone of evolutionary ecology. However, the way in which latitude might influence investment in exaggerated weapons of animals has received little attention. The European stag beetle Lucanus cervus (Linnaeus, 1758) is the focus of this study. Males of this species exhibit exaggerated mandibles, mainly used as weapons during intra-sexual conflicts. Five populations ranging from northern Italy to the southern limit of the distribution of L. cervus were analysed. Combining morphological and phenological data, latitudinal variation in body size, weapon investment and activity period of the adults were evaluated. The analysis of the allometry of mandibles strongly supported the presence of two male morphs. Large males (major morph) invest significantly more in weapons compared to males of the minor morph. Consistent with Bergmann’s Rule, these results confirmed that the stag beetle body size increased at higher latitudes (N) and that this increase in size triggers an arms race which leads to further exaggeration of male weapons which is particularly evident in major males. In this morph, the mandible allometric coefficient line was steeper for the northern populations. The activity period also varied with latitude, beginning later at lower latitudes. Characterisation and comparison of adult phenologies provide valuable data to be used in the design of monitoring programmes for this threatened species and are important for modelling the species responses to climate change.

Monitoring of offshore geological carbon storage integrity: Implications of natural variability in the marine system and the assessment of anomaly detection criteria

The design of efficient monitoring programmes required for the assurance of offshore geological storage requires an understanding of the variability and heterogeneity of marine carbonate chemistry. In the absence of sufficient observational data and for extrapolation both spatially and seasonally, models have a significant role to play. In this study a previously evaluated hydrodynamic-biogeochemical model is used to characterise carbonate chemistry, in particular pH heterogeneity in the vicinity of the sea floor. Using three contrasting regions, the seasonal and short term variability are analysed and criteria that could be considered as indicators of anomalous carbonate chemistry identified. These criteria are then tested by imposing a number of randomised DIC perturbations on the model data, representing a comprehensive range of leakage scenarios. In conclusion optimal criteria and general rules for developing monitoring strategies are identified. Detection criteria will be site specific and vary seasonally and monitoring may be more efficient at periods of low dynamics. Analysis suggests that by using high frequency, sub-hourly monitoring anomalies as small as 0.01 of a pH unit or less may be successfully discriminated from natural variability – thereby allowing detection of small leaks or at distance from a leakage source. Conversely assurance of no leakage would be profound. Detection at deeper sites is likely to be more efficient than at shallow sites where the near bed system is closely coupled to surface processes. Although this study is based on North Sea target sites for geological storage, the model and the general conclusions are relevant to the majority of offshore storage sites lying on the continental shelf.

High Resolution Orthomosaics of African Coral Reefs: A Tool for Wide-Scale Benthic Monitoring

Coral reefs play a key role in coastal protection and habitat provision. They are also well known for their recreational value. Attempts to protect these ecosystems have not successfully stopped large-scale degradation. Significant efforts have been made by government and research organizations to ensure that coral reefs are monitored systematically to gain a deeper understanding of the causes, the effects and the extent of threats affecting coral reefs. However, further research is needed to fully understand the importance that sampling design has on coral reef characterization and assessment. This study examines the effect that sampling design has on the estimation of seascape metrics when coupling semi-autonomous underwater vehicles, structure-from-motion photogrammetry techniques and high resolution (0.4 cm) underwater imagery. For this purpose, we use FRAGSTATS v4 to estimate key seascape metrics that enable quantification of the area, density, edge, shape, contagion, interspersion and diversity of sessile organisms for a range of sampling scales (0.5 m × 0.5 m, 2 m × 2 m, 5 m × 5 m, 7 m × 7 m), quadrat densities (from 1–100 quadrats) and sampling strategies (nested vs. random) within a 1655 m2 case study area in Ponta do Ouro Partial Marine Reserve (Mozambique). Results show that the benthic community is rather disaggregated within a rocky matrix; the embedded patches frequently have a small size and a regular shape; and the population is highly represented by soft corals. The genus Acropora is the more frequent and shows bigger colonies in the group of hard corals. Each of the seascape metrics has specific requirements of the sampling scale and quadrat density for robust estimation. Overall, the majority of the metrics were accurately identified by sampling scales equal to or coarser than 5 m × 5 m and quadrat densities equal to or larger than 30. The study indicates that special attention needs to be dedicated to the design of coral reef monitoring programmes, with decisions being based on the seascape metrics and statistics being determined. The results presented here are representative of the eastern South Africa coral reefs and are expected to be transferable to coral reefs with similar characteristics. The work presented here is limited to one study site and further research is required to confirm the findings.

The importance of patient compliance in repeated rounds of mass drug administration (MDA) for the elimination of intestinal helminth transmission

BackgroundSystematic non-compliance to chemotherapeutic treatment among a portion of the eligible population is thought to be a major obstacle to the elimination of helminth infections by mass drug administration (MDA). MDA for helminths is repeated at defined intervals such as yearly or every 2 years, as a consequence of the inability of the human host to develop fully protective immunity to reinfection. As such, how an individual complies to these repeated rounds of MDA can have a significant impact on parasite transmission. The importance of this factor is poorly understood at present. Few epidemiological studies have examined longitudinal trends in compliance in the many communities in areas of endemic helminth infection that are undergoing MDA. Reducing systematic non-compliance will obviously increase the number of individuals treated, but it may also alter the dynamics of parasite transmission.MethodsHere we develop an individual-based stochastic model of helminth transmission and MDA treatment to investigate how different patterns of compliance influence the impact of MDA for two groups of helminths, the soil transmitted nematode infections and the schistosome parasites. We study the effect of several alternative treatment and compliance patterns on the dynamics of transmission.ResultsWe find that the impact of different compliance patterns, ranging from random treatment at each round of chemotherapy to systematic non-compliance by a proportion of the population, is very dependent on both transmission intensity in a defined setting and the type of infection that the treatment is targeted at. Systematic non-compliance has a greater impact on the potential for elimination of Schistosoma mansoni transmission by intensive MDA, than it does on Ascaris lumbricoides.ConclusionsWe discuss the implications of our findings for the prioritisation of resources in MDA programmes and for monitoring and evaluation programme design. The key message generated by the analyses is that great care must be taken to record individual longitudinal patterns of compliance at each round of MDA as opposed to just recording overall coverage.

Lessons from a Community-Based Program to Monitor Forest Vertebrates in the Brazilian Amazon.

A large number of sustainable use reserves recently have been titled in the Brazilian Amazonia. These reserves require public participation in the design and implementation of management and monitoring programs. Species-monitoring programs that engage local stakeholders may be useful for assessing wildlife status over the long term. We collaborated on the development of a participatory program to monitor forest vertebrates in the Piagaçu-Purus Sustainable Development Reserveand to build capacity among the local people. We examined relations between the distance to the nearest human community and sighting rates of each species, and evaluated the program overall. Eighteen wildlife monitors received training in line transect and sign surveys and then conducted surveys along a total of ten transects. Sighting rates of most species in the Piagaçu-Purus Sustainable Development Reserve were higher than those reported in other Amazonian forests. Distance to the human community was not associated with the overall vertebrate sighting rate. Use of the trained monitors was successful in terms of data acquisition and engagement. The involvement of local people promoted discussions about regulation of hunting in the reserve. Implementation of community-based programs to monitor forest wildlife in Amazonian sustainable use reserves may empower local communities and assess the status of wildlife through time.

Meeting the Needs for Radiation Protection: Diagnostic Imaging.

Radiation and potential risk during medical imaging is one of the foremost issues for the imaging community. Because of this, there are growing demands for accountability, including appropriate use of ionizing radiation in diagnostic and image-guided procedures. Factors contributing to this include increasing use of medical imaging; increased scrutiny (from awareness to alarm) by patients/caregivers and the public over radiation risk; and mounting calls for accountability from regulatory, accrediting, healthcare coverage (e.g., Centers for Medicare and Medicaid Services), and advisory agencies and organizations as well as industry (e.g., NEMA XR-29, Standard Attributes on CT Equipment Related to Dose Optimization and Management). Current challenges include debates over uncertainty with risks with low-level radiation; lack of fully developed and targeted products for diagnostic imaging and radiation dose monitoring; lack of resources for and clarity surrounding dose monitoring programs; inconsistencies across and between practices for design, implementation and audit of dose monitoring programs; lack of interdisciplinary programs for radiation protection of patients; potential shortages in personnel for these and other consensus efforts; and training concerns as well as inconsistencies for competencies throughout medical providers' careers for radiation protection of patients. Medical care providers are currently in a purgatory between quality- and value-based imaging paradigms, a state that has yet to mature to reward this move to quality-based performance. There are also deficits in radiation expertise personnel in medicine. For example, health physics academic programs and graduates have recently declined, and medical physics residency openings are currently at a third of the number of graduates. However, leveraging solutions to the medical needs will require money and resources, beyond personnel alone. Energy and capital will need to be directed to:• innovative and cooperative cross-disciplinary institutional/practice oversight of and guidance for the use of diagnostic imaging (e.g., radiology, surgical specialties, cardiologists, and intensivists);• initiatives providing practical benchmarks (e.g., dose index registries);• comprehensive (consisting of access, integrity, metrology, analytics, informatics) and effective and efficient dose monitoring programs;• collaboration with industry;• improved use of imaging, such as through decision support combined with evidence-based appropriateness for imaging use;• integration with e-health such as medical records;• education, including information extending beyond the medical imaging community that is relevant to patients, public, and providers and administration;• identification of opportunities for alignment with salient media and advocacy organizations to deliver balanced information regarding medical radiation and risk;• open lines of communication between medical radiation experts and appropriate bodies such as the U.S. Environmental Protection Agency, the U.S. Food and Drug Administration, and the Joint Commission to assure appropriate guidance on documents and actions originating from these organizations; and• increased grant funding to foster translational work that advances understanding of low-level radiation and biological effects.

Ecological and Environmental Management During the Hail 3D Transition-Zone Survey: Safe Working Practices Within a UNESCO World-Biosphere Reserve

Summary The Hail 3D transition-zone seismic survey, carried out by Abu Dhabi National Oil Company (ADNOC) in 2013–14, was located within an area considered to be of significant national and international environmental importance. Falling within a designated marine protected area (MPA) that was ratified by Abu Dhabi ministerial decree, as well as in a United Nations Educational, Scientific, and Cultural Organization (UNESCO) world-biosphere reserve, high standards of environmental and ecological management throughout the acquisition program were of paramount importance. Effective environmental and ecological management throughout the project was attained through the design and implementation of numerous working procedures and monitoring programs. These included the development of specific sets of mitigation guidelines for use during transition-zone surveys for minimizing disturbance and injury to marine mammals and turtles and for operating within mangrove areas, and the use of environmental profiling, auditing, and post-operational monitoring in both the terrestrial and marine environment for collecting new data on the biodiversity and ecology of the area. For the first time, we present ecological and environmental data collected over a period of 12 months within the Hail shoal area. In addition to data on species numbers and distributions, we present a method for effectively managing complex seismic surveys being carried out simultaneously in both the marine and terrestrial environment. For marine-mammal and turtle species, visual observations were compared over time and analyzed against seismic activity by use of a regression analysis. Our results demonstrate seasonal variation in total numbers throughout the year, with no significant reduction in observed numbers occurring as a result of seismic-exploration activities. We further demonstrate how a complex seismic survey can be managed and supervised to mitigate and minimize the environmental footprint or negative impacts on biodiversity as a result of the exploration and resource development considered crucial to the socioeconomic development of Abu Dhabi.

ICRP Publication 134: Occupational Intakes of Radionuclides: Part 2.

The 2007 Recommendations of the International Commission on Radiological Protection (ICRP, 2007) introduced changes that affect the calculation of effective dose, and implied a revision of the dose coefficients for internal exposure, published previously in the Publication 30 series (ICRP, 1979, 1980, 1981, 1988b) and Publication 68 (ICRP, 1994b). In addition, new data are available that support an update of the radionuclide-specific information given in Publications 54 and 78 (ICRP, 1988a, 1997b) for the design of monitoring programmes and retrospective assessment of occupational internal doses. Provision of new biokinetic models, dose coefficients, monitoring methods, and bioassay data was performed by Committee 2, Task Group 21 on Internal Dosimetry, and Task Group 4 on Dose Calculations. A new series, the Occupational Intakes of Radionuclides (OIR) series, will replace the Publication 30 series and Publications 54, 68, and 78. Part 1 of the OIR series has been issued (ICRP, 2015), and describes the assessment of internal occupational exposure to radionuclides, biokinetic and dosimetric models, methods of individual and workplace monitoring, and general aspects of retrospective dose assessment. The following publications in the OIR series (Parts 2–5) will provide data on individual elements and their radioisotopes, including information on chemical forms encountered in the workplace; a list of principal radioisotopes and their physical half-lives and decay modes; the parameter values of the reference biokinetic model; and data on monitoring techniques for the radioisotopes encountered most commonly in workplaces. Reviews of data on inhalation, ingestion, and systemic biokinetics are also provided for most of the elements. Dosimetric data provided in the printed publications of the OIR series include tables of committed effective dose per intake (Sv per Bq intake) for inhalation and ingestion, tables of committed effective dose per content (Sv per Bq measurement) for inhalation, and graphs of retention and excretion data per Bq intake for inhalation. These data are provided for all absorption types and for the most common isotope(s) of each element. The electronic annex that accompanies the OIR series of reports contains a comprehensive set of committed effective and equivalent dose coefficients, committed effective dose per content functions, and reference bioassay functions. Data are provided for inhalation, ingestion, and direct input to blood. The present publication provides the above data for the following elements: hydrogen (H), carbon (C), phosphorus (P), sulphur (S), calcium (Ca), iron (Fe), cobalt (Co), zinc (Zn), strontium (Sr), yttrium (Y), zirconium (Zr), niobium (Nb), molybdenum (Mo), and technetium (Tc).

Summer habitat selection by Dall’s sheep in Wrangell-St. Elias National Park and Preserve, Alaska

Sexual segregation occurs frequently in sexually dimorphic species, and it may be influenced by differential habitat requirements between sexes or by social or evolutionary mechanisms that maintain separation of sexes regardless of habitat selection. Understanding the degree of sex-specific habitat specialization is important for management of wildlife populations and the design of monitoring and research programs. Using mid-summer aerial survey data for Dall’s sheep ( Ovis dalli dalli ) in southern Alaska during 1983–2011, we assessed differences in summer habitat selection by sex and reproductive status at the landscape scale in Wrangell-St. Elias National Park and Preserve (WRST). Males and females were highly segregated socially, as were females with and without young. Resource selection function (RSF) models containing rugged terrain, intermediate values of the normalized difference vegetation index (NDVI), and open landcover types best explained resource selection by each sex, female reproductive classes, and all sheep combined. For male and all female models, most coefficients were similar, suggesting little difference in summer habitat selection between sexes at the landscape scale. A combined RSF model therefore may be used to predict the relative probability of resource selection by Dall’s sheep in WRST regardless of sex or reproductive status.

Effects of model complexity and priors on estimation using sequential importance sampling/resampling for species conservation

We examined the effects of complexity and priors on the accuracy of models used to estimate ecological and observational processes, and to make predictions regarding population size and structure. State-space models are useful for estimating complex, unobservable population processes and making predictions about future populations based on limited data. To better understand the utility of state space models in evaluating population dynamics, we used them in a Bayesian framework and compared the accuracy of models with differing complexity, with and without informative priors using sequential importance sampling/resampling (SISR). Count data were simulated for 25 years using known parameters and observation process for each model. We used kernel smoothing to reduce the effect of particle depletion, which is common when estimating both states and parameters with SISR. Models using informative priors estimated parameter values and population size with greater accuracy than their non-informative counterparts. While the estimates of population size and trend did not suffer greatly in models using non-informative priors, the algorithm was unable to accurately estimate demographic parameters. This model framework provides reasonable estimates of population size when little to no information is available; however, when information on some vital rates is available, SISR can be used to obtain more precise estimates of population size and process. Incorporating model complexity such as that required by structured populations with stage-specific vital rates affects precision and accuracy when estimating latent population variables and predicting population dynamics. These results are important to consider when designing monitoring programs and conservation efforts requiring management of specific population segments.

Consistent patterns of variation in macrobenthic assemblages and environmental variables over multiple spatial scales using taxonomic and functional approaches

Spatial variability of environmental factors and macrobenthos, using species and functional groups, was examined over the same scales (100s of cm to >100 km) in intertidal sediments of two transitional water systems. The objectives were to test if functional groups were a good species surrogate and explore the relationship between environmental variables and macrobenthos. Environmental variables, diversity and the multivariate assemblage structure showed the highest variability at the scale of 10s of km. However, abundance was more variable at 10s of m. Consistent patterns were achieved using species and functional groups therefore, these may be a good species surrogate. Total carbon, salinity and silt/clay were the strongest correlated with macrobenthic assemblages. Results are valuable for design and interpretation of future monitoring programs including detection of anthropogenic disturbances in transitional systems and propose improvements in environmental variable sampling to refine the assessment of their relationship with biological data across spatial scales.

Identifying key sedimentary indicators of geomorphic structure and function of upland swamps in the Blue Mountains for use in condition assessment and monitoring

Temperate Highland Peat Swamps on Sandstone (THPSS) are located at the headwaters of streams on low relief plateaus of Eastern Australia. Swamp sediment structure has a direct link to the high water tables, element cycling and carbon sequestration that are the characteristic functions of these systems. By comparing the sediment structure of intact swamps and channelised fills, we can gain an understanding of how changes in swamp geomorphology change both swamp structure and function. We examined the sedimentology of six intact and six channelised fill swamps in the Blue Mountains NSW, Australia. There were significant differences in texture, unit thickness, Carbon: Nitrogen (C:N) ratios and moisture content between intact swamps and channelised fills. The presence and thickness of unmodified contemporary sand layers in almost all channelised fills and its absence in almost all intact swamps was a distinctive structural difference. The two functional swamp layers, in terms of water and carbon storage were almost double the mean thickness in intact swamps than in channelised fills. Moisture content was 30% higher in intact swamps than in channelised fills. Mean C: N ratios for channelised fills were 25% lower than that of intact swamps. Peat forming potential, as defined by C:N ratios >27, started at a greater depth in the sediment profile (0.9m lower) in channelised fills than in intact swamps. It is clear from this study that these structural and functional indicators are important for assessing swamp condition and can also be useful in designing monitoring programs for management and rehabilitation that target key structural attributes that produce and maintain swamp function.

Efficacy of Soiled Bedding Transfer for Transmission of Mouse and Rat Infections to Sentinels: A Systematic Review.

PurposeThis systematic review was conducted to gain insight into the efficacy of transmission of infectious agents to colony sentinels by soiled bedding transfer based on publications studying this subject in mice and rats. This information is essential to establish recommendations for the design of health monitoring programs which use sentinels to determine the microbiological status of laboratory animal colonies.ResultsFifteen original articles retrieved from PubMed, Embase, and CAB abstracts met the inclusion criteria. The design of the studies varied substantially per infectious agent with regard to dose of soiled bedding, exposure time, and sentinel strains used.ConclusionWith our conservative criteria for effectiveness, soiled bedding transfer appeared to be effective for MHV, MPV, TMEV, Helicobacter spp., and fur mite infections and ineffective for Sendai virus. For other infectious agents, such as MNV, EDIM, MVM, SDAV, Clostridium piliforme, and pinworms, too few data were available to be able to draw robust conclusions on the efficacy of soiled bedding transfer.RecommendationThe identified evidence only pertains to a portion of the infectious organisms included in the FELASA 2014 guidelines. As many animal facilities design their health monitoring program according to these recommendations, additional studies are warranted to draw comprehensive conclusions on the effective transmission of the infectious agents listed in these guidelines by soiled bedding transfer.

Multiscale occupancy modeling provides insights into range-wide conservation needs of Lesser Prairie-Chicken (Tympanuchus pallidicinctus)

ABSTRACT The range-wide monitoring program for the Lesser Prairie-Chicken (Tympanuchus pallidicinctus) plays an important role in landscape conservation initiatives for the recovery of this species. Methodologies to evaluate the species' responses to habitat conditions and conservation practices are necessary to evaluate the success of these initiatives. We adapted the design of the range-wide monitoring program and applied a multiscale occupancy model. The objectives were to (1) estimate occupancy at multiple spatial scales and (2) conduct an exploratory evaluation of responses to habitat condition and conservation practices at multiple spatial scales. The application of the model to a single year of data from the range-wide monitoring program yielded a coefficient of variation (CV) of large-scale occupancy of 17%. The CVs of small-scale occupancy for the 4 ecoregions ranged between 21% and 52% and were acceptable for detecting differences between strata. We used the method of multiple working hypotheses...

Jungle Giants: Assessing Sustainable Harvesting in a Difficult-to-Survey Species (Python reticulatus).

Sustainability of wildlife harvests is critical but difficult to assess. Evaluations of sustainability typically combine modelling with the measurement of underlying abundances. For many taxa harvested in developing countries, however, abundances are near-impossible to survey and a lack of detailed ecological information impedes the reliability of models. In such cases, repeated surveys of the attributes of harvested individuals may provide more robust information on sustainability. If the numbers, sizes and other demographic attributes of animals taken for the commercial trade do not change over biologically significant time intervals (decades), there is a prima facie case that the harvest is indeed sustainable. Here, we report the results of examinations of > 4,200 reticulated pythons (Python reticulatus) taken for the commercial leather industry in northern and southern Sumatra, Indonesia. The numbers, mean body sizes, clutch sizes, sizes at maturity and proportion of giant specimens have not decreased between our first surveys (1995) and repeat surveys (2015). Thus, despite assumptions to the contrary, the harvest appears to be sustainable. We use our data to inform the design of future monitoring programs for this species. Our study underpins the need for robust science to inform wildlife trade policy and decision-making, and urges wildlife managers to assess sustainability of difficult-to-survey terrestrial wildlife by drawing inferences directly from the harvest itself.

An overview of the monitoring program design for the FutureGen 2.0 CO2 storage site

As part of the FutureGen 2.0 Project, a design was developed for a first-of-its-kind, commercial-scale, near-zero emissions coal-fueled power plant that includes carbon capture and storage (CCS) in a deep saline reservoir. To assess storage site performance and meet the regulatory requirements of the Class VI Underground Injection Control Program for CO2 Geologic Sequestration, the FutureGen 2.0 Project evaluated, selected, and designed a suite of monitoring technologies for use in (1) evaluating CO2 mass balance, (2) detecting significant loss of CO2 containment, (3) tracking the spatial extent of the CO2 plume and advancement of the pressure front within the storage reservoir, and (4) identifying the occurrence and location of injection-related induced seismicity. The monitoring program design includes direct monitoring of the injection process (above ground and in the injection wells), injection-zone monitoring, early-leak-detection monitoring directly above the primary confining zone, and compliance monitoring within the lowermost underground source of drinking water (USDW); it also includes measurements of formation pressure and other geochemical/isotopic signatures that provide an indication of changes in CO2 concentration and/or brine composition, both within the injection zone and immediately above the primary confining zone. In addition to these direct measurements, several indirect geophysical monitoring technologies were included in the monitoring program design such as passive seismic and integrated surface deformation monitoring. Although the FutureGen 2.0 Project was suspended by the U.S. Department of Energy prior to implementation of the monitoring program design, this overview is provided with the hope that other current or future CCS projects will derive benefit from consideration of the approach and monitoring network configuration adopted by the project.

Confidence in ecological indicators: A framework for quantifying uncertainty components from monitoring data

The value of an ecological indicator is no better than the uncertainty associated with its estimate. Nevertheless, indicator uncertainty is seldom estimated, even though legislative frameworks such as the European Water Framework Directive stress that the confidence of an assessment should be quantified. We introduce a general framework for quantifying uncertainties associated with indicators employed to assess ecological status in waterbodies. The framework is illustrated with two examples: eelgrass shoot density and chlorophyll a in coastal ecosystems. Aquatic monitoring data vary over time and space; variations that can only partially be described using fixed parameters, and remaining variations are deemed random. These spatial and temporal variations can be partitioned into uncertainty components operating at different scales. Furthermore, different methods of sampling and analysis as well as people involved in the monitoring introduce additional uncertainty. We have outlined 18 different sources of variation that affect monitoring data to a varying degree and are relevant to consider when quantifying the uncertainty of an indicator calculated from monitoring data. However, in most cases it is not possible to estimate all relevant sources of uncertainty from monitoring data from a single ecosystem, and those uncertainty components that can be quantified will not be well determined due to the lack of replication at different levels of the random variations (e.g. number of stations, number of years, and number of people). For example, spatial variations cannot be determined from datasets with just one station. Therefore, we recommend that random variations are estimated from a larger dataset, by pooling observations from multiple ecosystems with similar characteristics. We also recommend accounting for predictable patterns in time and space using parametric approaches in order to reduce the magnitude of the unpredictable random components and reduce potential bias introduced by heterogeneous monitoring across time. We propose to use robust parameter estimates for both fixed and random variations, determined from a large pooled dataset and assumed common across the range of ecosystems, and estimate a limited subset of parameters from ecosystem-specific data. Partitioning the random variation onto multiple uncertainty components is important to obtain correct estimates of the ecological indicator variance, and the magnitude of the different components provide useful information for improving methods applied and design of monitoring programs. The proposed framework allows comparing different indicators based on their precision relative to the cost of monitoring.

Aligning community-based water monitoring program designs with goals for enhanced environmental management

Community-based water monitoring (CBWM) provides essential baseline information on watershed health and engages the public in science, but those involved often encounter barriers to informing environmental management. We conducted qualitative interviews with watershed group coordinators and government counterparts from four CBWM organizations to explore instances where CBWM successfully influenced governmental decision-making. Our findings show that the level of rigor for quality standards, inclusion of volunteers, available resources, and desired goals are important considerations when designing community-based monitoring programs. Integrated program designs that include adequate quality standards and engage volunteers are more apt to maximize resources and realize both scientific and educational goals.

Outcropping reef ledges drive patterns of epibenthic assemblage diversity on cross-shelf habitats

Seafloor habitats on continental shelf margins are increasingly being the subject of worldwide conservation efforts to protect them from human activities due to their biological and economic value. Quantitative data on the epibenthic taxa which contributes to the biodiversity value of these continental shelf margins is vital for the effectiveness of these efforts, especially at the spatial resolution required to effectively manage these ecosystems. We quantified the diversity of morphotype classes on an outcropping reef system characteristic of the continental shelf margin in the Flinders Commonwealth Marine Reserve, southeastern Australia. The system is uniquely characterized by long linear outcropping ledge features in sedimentary bedrock that differ markedly from the surrounding low-profile, sand-inundated reefs. We characterize a reef system harboring rich morphotype classes, with a total of 55 morphotype classes identified from the still images captured by an autonomous underwater vehicle. The morphotype class Cnidaria/Bryzoa/Hydroid matrix dominated the assemblages recorded. Both α and β diversity declined sharply with distance from nearest outcropping reef ledge feature. Patterns of the morphotype classes were characterized by (1) morphotype turnover at scales of 5 to 10s m from nearest outcropping reef ledge feature, (2) 30 % of morphotype classes were recorded only once (i.e. singletons), and (3) generally low levels of abundance (proportion cover) of the component morphotype class. This suggests that the assemblages in this region contain a considerable number of locally rare morphotype classes. This study highlights the particular importance of outcropping reef ledge features in this region, as they provide a refuge against sediment scouring and inundation common on the low profile reef that characterizes this region. As outcropping reef features, they represent a small fraction of overall reef habitat yet contain much of the epibenthic faunal diversity. This study has relevance to conservation planning for continental shelf habitats, as protecting a single, or few, areas of reef is unlikely to accurately represent the geomorphic diversity of cross-shelf habitats and the morphotype diversity that is associated with these features. Equally, when designing monitoring programs these spatially-discrete, but biologically rich outcropping reef ledge features should be considered as distinct components in stratified sampling designs.

Area use and movement patterns of wild and escaped farmed Atlantic salmon before and during spawning in a large Norwegian river

AEI Aquaculture Environment Interactions Contact the journal Facebook Twitter RSS Mailing List Subscribe to our mailing list via Mailchimp HomeLatest VolumeAbout the JournalEditorsTheme Sections AEI 8:77-88 (2016) - DOI: https://doi.org/10.3354/aei00165 Area use and movement patterns of wild and escaped farmed Atlantic salmon before and during spawning in a large Norwegian river Karina Moe1,2, Tor F. Næsje1,*, Thrond O. Haugen2, Eva M. Ulvan1, Tonje Aronsen1, Tomas Sandnes3, Eva B. Thorstad1 1Norwegian Institute for Nature Research (NINA), PO Box 5685 Sluppen, 7485 Trondheim, Norway 2Norwegian University of Life Sciences (NMBU), PO Box 5003 NMBU, 1432 Ås, Norway 3Aqua Kompetanse AS, 7770 Flatanger, Norway *Corresponding author: tor.naesje@nina.no ABSTRACT: We compared the within-river movements and distribution of wild and escaped farmed Atlantic salmon Salmo salar before and during spawning in the Namsen river system of Central Norway. A total of 74 wild and 43 escaped farmed salmon were captured at sea, tagged with radio transmitters and released. Based on our examinations, most, if not all salmon (farmed and wild) entering the River Namsen were sexually mature. Farmed salmon entering the river system had a higher probability than wild individuals of reaching the migration barrier in the upper part of the river, 70 km from the sea. During the pre-spawning and spawning periods, farmed salmon were located mainly in the upper parts (50 to 70 km from the sea), whereas wild salmon were evenly distributed along the entire river during both periods. Consequently, the probability of farmed × wild inter-breeding varied among river sections. Our finding that the distribution of escaped farmed salmon may differ from that of wild salmon and among river sections in the pre-spawning and spawning periods—and that it may also vary over time—must be taken into consideration when (1) designing monitoring programs aimed at estimating the proportion of escaped farmed salmon in rivers and (2) when interpreting monitoring results. Furthermore, targeted fishing in the river aimed at reducing the number of farmed salmon prior to spawning may be more effective in upper rivers sections, and below major migration barriers. KEY WORDS: Radio telemetry · Farmed escapees · Within-river movements · Pre spawning · Spawning period · Introgression risk · River Namsen Full text in pdf format Supplementary material PreviousNextCite this article as: Moe K, Næsje TF, Haugen TO, Ulvan EM, Aronsen T, Sandnes T, Thorstad EB (2016) Area use and movement patterns of wild and escaped farmed Atlantic salmon before and during spawning in a large Norwegian river. Aquacult Environ Interact 8:77-88. https://doi.org/10.3354/aei00165 Export citation RSS - Facebook - Tweet - linkedIn Cited by Published in AEI Vol. 8. Online publication date: February 02, 2016 Print ISSN: 1869-215X; Online ISSN: 1869-7534 Copyright © 2016 Inter-Research.