Electropulsing treatment (EPT) is a promising technology for controlling the phase transition during the solidification of melts owing to its electric and thermal effects. In this study, the influence of EPT on the crystallization and melt structure of a calcium silicate-based mold flux was investigated. The results showed that the morphology of crystals that precipitated in the mold flux changed from elongated columnar to block shape, and the equivalent grain diameter of the crystals increased with increasing voltage from 0 to 20 V. The mass fraction of Ca4Si2O7F2 precipitated in the mold flux decreased with increasing impulse voltage, whereas that of Ca2Mg0.75Al0.5Si1.75O7 increased. Raman spectroscopy and X-ray photoelectron spectroscopy (XPS) analyses suggest that the network structure of both silicate and aluminate was simplified by electropulsing because the simpler structural units of Q0, Q1, [AlO6]9+, etc., increased with increasing impulse voltage, whereas the complex structural units of Q2, Q3, and [AlO4]5+ decreased. The extra electric field force is the repulsion force between two oppositely charged ions, which was the root of the network structure simplification and crystallization promotion. The results obtained in this study provide an innovative method for locally controlling the crystallization behavior of mold flux in a mold.