Minute Amounts Research Articles

Evaluation of Nutritional Composition of Ocimum gratissimum Leaf Extract

Vegetables are known to be vital sources of nutritive foods. This study evaluates the nutritional composition of Ocimum gratissimum leaf extract vis-a-vis proximate, minerals and vitamins analyses. Fresh leaves of O. gratissimum were purchased from a local market in Awka North Local Government Area of Anambra State, Nigeria and were washed, destalked, oven-dried at 40 0C, pulverized, and sieved through 2.0 mm mesh prior to analysis. Proximate, minerals, and vitamin analyses were carried out, using standard methods. Results indicated that O. gratissimum contained high levels of carbohydrate (51.78 ± 0.50 %), protein (10.50 ± 0.04 %), and fiber (9.38 ± 0.05 %), with minute quantity of crude fat (4.94 ± 0.03 %). Analysis of the mineral compositions showed that the vegetable contained considerable quantity of minerals that is sufficient to improve general well-being, while the vitamin analysis revealed that the leaves of O. gratissimum was sufficiently rich in Vitamin E and could, therefore, act as antioxidant and consequently help to improve health status of its consumers.

Nanostructured Lipid Carrier for Dermatological Application: A Comprehensive Review and Future Perspective

Abstract:: Dermatological disease states have psychological impacts that affect a patient’s life. In the management of such disorders, topical delivery has an important role. However, the conven-tional topical delivery systems suffer from various limitations, like skin irritation, a minute quan-tity of drugs reaching disease sites, and over and under medication, which leads to an adverse re-action and therapeutic failure, respectively. Therefore, researchers continuously search for an al-ternate delivery system for treating skin disease. In recent years, nanostructured lipid carriers (NLC) have emanated as promising carrier systems for topical delivery. The current review pro-vides an in-depth insight into topical administration for treating a variety of dermatological issues using NLCs as a carrier. This review highlights the suitability of NLCs as carriers for topical de-livery, their method of preparation, and their characterization. In the present review, the main emphasis has been given to the management of various dermatological problems by using NLCs as a carrier; a plethora of literature investigating NLC as the carrier for topical delivery has been included in this review. In this paper, an attempt has been made to provide a summary of the re-search carried out in this field that will encourage further research in this arena.

Ab Initio Molecular Dynamics Investigation of Water and Butanone Adsorption on UiO-66 with Defects.

Volatile organic compounds (VOCs) are harmful chemicals that are found in minute quantities in the atmosphere and are emitted from a variety of industrial and biological processes. They can be harmful to breathe or serve as biomarkers for disease detection. Therefore, capture and detection of VOCs is important. Here, we have examined if the Zr-based UiO-66 metal-organic framework (MOF) can be used to capture butanone─a well-known VOC. Toward that end, we have performed Born-Oppenheimer ab initio molecular dynamics (AIMD) at 300 and 500 K to probe the energetics and molecular interactions between butanone [CH3C(O)CH2CH3] and open-cage Zr-UiO-66. Such interactions were systematically interrogated using three MOF structures: defective MOF with a missing 1,4-benzene-dicarboxylate linker and two H2O; pristine MOF with two H2O; and pristine dry MOF. These structures were loaded with one and four molecules of butanone to examine the effect of concentration as well. One-molecule loading interacted favorably with the defective structure at 300 K, only. In comparison, interactions with four-molecule loading were energetically favorable for all conditions. Persistent hydrogen bonds between the O atom of butanone, H2O, and μ3-OH hydroxyl attachments at Zr nodes substantially contributed to the intermolecular interactions. At higher loadings, butanone also showed a pronounced tendency to diffuse into the adjoining cages of Zr-UiO-66. The effect of such movement on interaction energies was rationalized using simple statistical mechanics-based models of interacting and noninteracting gases. Broadly, we learn that the presence of prior moisture within the interstitial cages of Zr-UiO-66 significantly impacts the adsorption behavior of butanone.

Antimicrobial effects and phytochemical analysis of guava leaf extracts on selected microorganisms

The misuse of antimicrobial agents can lead to emergence of resistance to microbes which in turn can lead to the search for alternative therapy. The use of phytopharmaceuticals and herbal medicines have a positive impact and represents a promising alternative. Guava extract has been reported to have antimicrobial properties. However, the aim of this study was to determine the antimicrobial activities of methanol and ethanol extract of guava leave against some certain bacteria (Staphylococus aureus and Escherichia coli) and a fungus (Candida albicans). Qualitative phytochemical screening showed that phenols, tannins, saponins, terpenoids, flavonoids and glycosides are all present in the leaf extract; phenols and tannins are moderately present while others are present in minute quantities. Out of the different concentrations use (50, 100, 200 and 250), The highest concentration which is 250mg/ml showed the highest zone of inhibition for both methanolic and ethanolic extracts against the isolates. Minimum inhibitory concentration and Minimum Bactericidal Concentrations value for both S. aureus and E. coli are 200mg/ml and 250mg/ml respectively; while 50mg/ml and 100mg/ml are for Candida albicans.

Stable Droplet Manipulation in Multiple Directions on a Magnetically Responsive Micropillar Array Surface

AbstractDroplets constitute an essential discrete form of liquids and are prevalent in both natural and industrial fields. Droplet manipulation technologies have broad application prospects in various fields, including biomedical devices, chemical engineering, water collection, and so on. The manipulation of surfaces with magnetic responsiveness has emerged as a pivotal technique in droplet control owing to its flexibility and precision in remote operations. In this study, the dynamic rolling behavior of low‐surface‐tension working fluids and water droplets on a superhydrophobic magnetically responsive micropillar array (SMMA) is investigated, with a focus on the mechanisms that generate instabilities during the directional rolling motion of droplets. The factors influencing these instabilities are studied using data analysis. Moreover, techniques for capturing and releasing droplets are investigated, offering significant insights into the efficient handling of minute amounts of liquids in experiments and the automation of intricate chemical processes.

A Cross-Sectional Study of Serum Levels of Several Vitamins in Healthy and Unhealthy Periodontal Conditions

Vitamins are examples of micronutrients, which are nutrients needed in very minute quantities. They're crucial to metabolism and keeping tissues working properly. The purpose of this study was to determine whether vitamin deficiencies are associated with an increased risk of periodontitis. There was a total of 110 participants: 55 with chronic periodontitis spread throughout the mouth and 55 periodontally healthy individuals. Clinical parameters that were assessed included: Clinical attachment loss (in millimetres) and gingival index (in millimetres). Vitamin B12, vitamin D, folate, as well as vitamin E levels in serum samples were measured. Also measured were Beta-carotene and Beta-cryptoxanthin levels. The acquired data was aggregated and analysed using statistical programmes. All periodontal status clinical measures in the periodontitis group were statistically significantly different from those in the healthy volunteers group (p < 0.0001). Vitamin A precursors Beta-carotene and Beta-cryptoxanthin, folate, D, vitamins B12, and E, and vitamin E were all significantly lower in the periodontitis group compared to the healthy volunteers, but the difference was only statistically significant for vitamins B12 as well as D (p < 0.05). Finally, we conclude that serum micronutrient levels, particularly those of Vitamin A, Vitamin B12, and Vitamin D, may be modifiable risk factors for periodontal disease. In addition to practicing good dental hygiene on a regular basis, eating a diet rich in the right kinds of vitamins may play a significant part in warding off periodontitis.

CuO@3D graphene modified glassy carbon electrode towards the detection of Orange II and Rhodamine B

Synthetic dyes are illegally used in foodstuffs and cause serious health issues in humans due to their carcinogenic nature. To avoid serious health issues, it is compulsory to detect and remove even the minute quantities of these harmful dyes in foodstuffs. Electrochemical sensors are accredited as an efficient and promising platform for the robust and sensitive determination of food toxins in various foodstuffs. Therefore, an efficient, facile, and competent sensor is devised for the simultaneous detection of Orange II (OR II) and Rhodamine B (RhB) supported by rGO and CuO nanoparticles. The synergism between rGO’s immense surface area and the adsorption properties of CuO enhances selectivity and response time for the detection of OR II and RhB. This work elaborated the synthesis, characterization, and electrochemical behavior of CuO@3DGr electrode towards simultaneous sensing of OR II and RhB. Physicochemical techniques were utilized to validate the fabrication of targeted material. On the other hand, the electrochemical features of the developed sensor were characterized by cyclic voltammetry (CV) and electron impedance spectroscopy (EIS). Differential pulse voltammetry technique was employed to detect simultaneously Orange II and Rhodamine B on the surface of bare (GCE), GO/GCE, CuO/GCE, and CuO@3DGr/GCE. Multi-analyte detection is possible with DPV, a sensitive electrochemical method. Based on each toxin’s specific electrochemical signature, the sensor may generate separate peaks by delivering a sequence of potential pulses and detecting the ensuing current. The parameters which influence the performance of the modified sensor were carefully evaluated. Under ambient conditions, the developed sensor exhibited excellent electrocatalytic activity in oxidation at 0.67 V of OR II and 0.96 V RhB with a low limit of detection 08 nM for OR II and 4.5 nM for RhB in Britton- Robinson buffer (BRB pH:7). The described methodology allowed a robust and fast analysis of food toxins in different foodstuff establishing this sensor as a novel tool for detecting food toxins. Tap water was used to analyze the practical applicability of developed electrode material and suitable results were achieved. These results showed that the as-synthesized novel electrochemical sensor has the potential for ultrasensitive determination and detection of toxins in different foodstuffs.

Restaurant staff's knowledge, practices, and attitudes pertaining to food allergy in Qassim region, Saudi Arabia: A cross-sectional analysis.

Food allergies, often triggered by minute amounts of certain foods, affect people of all ages and frequently occur in dining-out settings. Previous research in Saudi Arabia has not investigated the extent of restaurant workers' knowledge of food allergies and their role in protecting patrons from allergic reactions. This descriptive study assessed the knowledge, attitudes, and practices of restaurant staff regarding food allergies in Qassim, Saudi Arabia between January and March 2023. Interviews and observations were conducted in four stages, and data were analyzed using the Environmental Health Specialists Network Food Allergen Study Protocol. Results showed that most restaurant staff had limited knowledge of food allergens and their symptoms, and a small proportion had received specific training on food allergies. Moreover, only 14% of restaurants provided allergen information on their menus. Despite these knowledge gaps, most staff exhibited positive attitudes toward managing food allergies. Findings also indicated that factors such as experience, training, and restaurant policies were associated with higher levels of knowledge and more positive attitudes. These results highlight the urgent need for the restaurant sector to implement food allergy measures, including clear policies and comprehensive training, to prevent potentially life-threatening incidents.

Ozone Doping and Negative Temperature Response in the Explosion Limits of Ethylene-Oxygen Mixtures.

In this work, effects of ozone (O3) addition on ethylene-oxygen (C2H4-O2) mixtures are computationally studied through the explosion limit profiles. The results show that the addition of minute quantities of ozone (with a mole fraction of 0.06% in the oxidizer) shifts the explosion limit of the C2H4-O3-O2 mixtures to the low-temperature regime. Further increases in the ozone concentration gradually strengthen the negative temperature coefficient (NTC) behavior at the second limit. That is because the explosion limit is primarily controlled by the ethylene ozonolysis reaction, and both the sensitivity analysis and chemical reaction rate perturbation method reveal specific kinetic reasons. Furthermore, it is shown that with the increasing equivalence ratio, the explosion limit curve with minute ozone addition rotates counterclockwise around a crossover point, while the explosion limit curve becomes complicated and the NTC behavior appears on the second limit with larger quantities of ozone addition. Furthermore, the effects of dilutions of nitrogen (N2), argon (Ar), carbon dioxide (CO2), and water (H2O) on the explosion limits are also studied. To elucidate the different wall elimination effects of different explosion limit regimes, the impacts of surface reactions of six radicals (H, O, OH, HO2, H2O2, and HCO) have been examined and the dominant radicals are found to be H and HO2. The H radicals significantly influence the first explosion limit, while the HO2 radicals impact the entire explosion limit.

Amplification of vibration induced nystagmus in patients with peripheral vestibular loss by head tilt.

In patients with unilateral loss of vestibular function (UVL) vibration of the skull leads to a response of the vestibulo-ocular reflex (VOR) called vibration-induced nystagmus (VIN), with slow phases usually directed toward the paretic ear. This response is thought to result from the difference between the neural discharge in semicircular canal afferents from the healthy and the affected labyrinth. The brain interprets this difference as a sustained imbalance in angular (rotational) vestibular tone, which in natural circumstances would only occur when the head was rotating at a constant acceleration. To study this effect, we used a contemporary model of the neural network that combines sensory information about head rotation, translation, and tilt relative to gravity to estimate head orientation and motion. Based on the model we hypothesize that in patients with UVL, the brain may estimate not only a "virtual" rotation from the induced canal imbalance but also a subsequent "virtual" translation from the incorrect computation of the orientation of the head relative to gravity. If this is the case, the pattern of vibration-induced nystagmus will depend on the orientation of the head relative to gravity during the stimulation. This model predicts that this "virtual" translation will alter the baseline VIN elicited with the head upright; augmenting it when the affected ear is down and diminishing it when the affected ear is up. Confirming this hypothesis, we recorded VIN in 3 patients with UVL (due to vestibular neuritis) in upright, right ear-down, and left ear-down positions and each showed the expected pattern. From a practical, clinical view, our results and modeling suggest that positional VIN might reveal a hidden imbalance in angular vestibular tone in patients with UVL, when patients have equivocal signs of a vestibular imbalance, such as a minute amount of spontaneous or vibration-induced nystagmus with the head upright. This research provides insights into the underlying mechanisms of vestibular processing, the analysis of nystagmus in patients with UVL, and guides the design of a new bedside diagnostic test to assess vestibular function in patients with dizziness and imbalance.

Comparative Evaluation of Methane Yield from Continuous and Batch Fermentative Processing of Selected Agrowaste

This study investigated the influence of different agrowaste compositions on methane yield in batch and continuous operational modes, highlighting the significance of substrate characteristics in determining the efficiency of methane production. It comparatively assessed the methane yield derived from continuous and batch fermentative processing of the following agrowaste; Cassava peels (A), Maize husks (B), Pig Slurry (C), and composite (D) that represents the co-digestion of the aforementioned A, B & C. Eight digesters were used in all, two anaerobic systems for each substrate, [I.e one operating in a batch mode (1) and the other in a continuous mode (2)]. The proximate properties of the substrates were determined and gas production rates were monitored over the experimental period of 45 days. Gas analysis of the generated gas revealed mainly methane and CO2, with concomitant organic compounds like; Ethanol, Methanol, Acetic Acid, Acetone, etc. Minute quantities of Phenol and Lactic Acid were mainly found in the gas generated from Cassava peels. The average percentage value of Co-digested substrates (D) yielded higher gas volume of 78.263±4.54, followed by C (74.263±4.65), B (70.240±4.38), and A (56.090±3.50). The results also revealed that the continuous fermentative process demonstrated a more stable and consistent methane production rate compared to the batch system, attributed to its steady-state operational mode and continuous substrate feed input. However, modeled graphical results showed that batch fermentation system produced higher gas yield (for all the substrates) between days 29-39 before it recorded a sharp decline curve, attributed to the reduction in substrate availability.

Fano mode based plasmonic sensor for temperature and chemical pollutant detection

Plasmonic sensors provide great sensitivity to minute quantities of analytes and provide excellent detection. In present context of environmental monitoring, plasmonic sensor can prove to be an excellent choice in chemical pollutant and temperature detection. Plasmonic sensors can provide immediate results, allowing for monitoring temperature changes in ecosystems or climate studies and quick decision-making in emergency situations related chemical pollution incidents. They are compact and can be integrated into portable devices for on-site analysis. In this investigation, a plasmonic refractive index sensor based on key ring shaped resonator consisting of a microring resonator and two rectangular resonator is proposed. Finite-Difference Time-Domain (FDTD) method is used to study the transmittance characteristics of the sensor. The device exhibits quadruple Fano resonance with highest sensitivity of 2521.7 nm/RIU. Other performance parameters such as figure of Merit (FOM), Quality (Q) factor and Detection limit (DL) are also been calculated, with values 98.8 RIU−1, 99.6 and 0.01 respectively. Additionally, the effects of different geometrical configurations is also studied, providing insights into the design principles in context of potential fabrication complexities. Further, the simulated Fano characteristic is validated against the theoretical value. The application of the proposed sensor is investigated for different types of analyte such as chemical pollutants and temperature sensing.

Structural modification of Pr3+-/Zr4+ doped HfO2:Eu3+ and the resulting luminescence and dielectric properties

Incorporating a minute amount of rare earth ions has been suggested to improve the functionality of electronic materials through the introduction of luminescence properties. HfO2-based materials have received significant attention owing to their high dielectric permittivity (k), excellent thermodynamic stability, and ferroelectricity. In this study, we fabricated luminescent high-k materials by co-doping Pr3+/Zr4+ and Eu3+ into HfO2, i.e., Hf1-xPrxO2-δ:Eu for x = 0.00, 0.01, 0.03, 0.05, 0.07, and 0.09, and into Hf1-yZryO2:Eu for y = 0.00, 0.10, 0.50, and 0.90 via the solid-state reaction method. The doping concentration of Eu3+ is 0.4 mol%. Rietveld refinement based on the X-ray diffraction pattern of Hf1-xPrxO2-δ:Eu shows that HfO2 undergoes structural transformation from monoclinic (P21/c) to cubic (Fm3̅m) as x increases, along with an increase in its dielectric constant. Although the structures of Hf1-yZryO2:Eu maintain the P21/c phase of HfO2 even with Zr4+ doping, their dielectric constants increase with y, which is associated closely with an increase in the grain size. The photoluminescence (PL) spectra of Hf1-xPrxO2-δ:Eu and Hf1-yZryO2:Eu under 396 nm excitation show the typical orange-red emission of Eu3+ ions. As x increases, the PL intensity of Hf1-xPrxO2-δ:Eu decreases because of its higher local structural symmetry. However, the PL intensity of Hf1-yZryO2:Eu increases with y because of its larger grain size. Our experiments suggest that Hf1-xPrxO2-δ:Eu and Hf1-yZryO2:Eu are promising candidates as multifunctional luminescent high-k materials.

Model for atomization droplet size and energy distribution ratio at the distal end of an electrostatic nozzle

Electrostatic atomization minimum quantity lubrication (EMQL) employs the synergistic effect of multiple physical fields to atomize minute quantities of lubricant. This innovative methodology is distinguished by its capacity to ameliorate the atomization attributes of the lubricant substantially, which subsequently augments the migratory and infiltration proficiency of the droplets within the complex and demanding milieu of the cutting zone. Compared with the traditional minimum quantity lubrication (MQL), the EMQL process is further complicated by the multiphysical field influences. The presence of multiple physical fields not only increases the complexity of the forces acting on the liquid film but also induces changes in the physical properties of the lubricant itself, thus making the analysis of atomization characteristics and energy distribution particularly challenging. To address this objective reality, the current study has conducted a meticulous measurement of the volume average diameter, size distribution span, and the percentage concentration of inhalable particles of the charged droplets at various intercept positions of the EMQL nozzle. A predictive model for the volume-averaged droplet size at the far end of the EMQL nozzle was established with the observed statistical value F of 825.2125, which indicates a high regression accuracy of the model. Furthermore, based on the changes in the potential energy of surface tension, the loss of kinetic energy of gas, and the electric field work at different nozzle orifice positions in the EMQL system, an energy distribution ratio model for EMQL was developed. The energy distribution ratio coefficients under operating conditions of 0.1 MPa air pressure and 0 to 40 kV voltage on the 20 mm cross-section ranged from 3.094‰ to 3.458‰, while all other operating conditions and cross-sections had energy distribution ratios below 2.06‰. This research is expected to act as a catalyst for the progression of EMQL by stimulating innovation in the sphere of precision manufacturing, providing theoretical foundations, and offering practical guidance for the further development of EMQL technology.

Gold removal from e-waste using high-intensity focused ultrasound

The demand for rare and precious metals (RPMs), e.g. gold, is increasing, as these are used in the ever-increasing amount of electronics needed for technological development and digitalization. Due to their rarity, virgin mining of RPMs is becoming more difficult and expensive. At the same time, over 62Mt of e-waste is created globally each year. The high concentration of gold and other RPMs in e-waste makes it an excellent source for recycling. Unfortunately, current recycling methods need to separate the different metals and the current pyrometallurgical and hydrometallurgical processes also create toxic pollutants, large amounts of wastewater and require highly corrosive substances. Here we present a new method for gold removal for the purpose of recycling, using only water and high-intensity focused ultrasound to induce material erosion through cavitation. An 11.8 MHz ultrasonic transducer is used to first image the sample to locate gold-coated pads on discarded printed circuit boards (PCBs) and subsequently to remove only the gold layer. We demonstrate that the gold removal can be controlled by the number of transmitted ultrasonic bursts and that the energy efficiency is optimal when only minute amounts of the nickel layer beneath are also removed. Removing solely the gold layer also decreases the need for further processing steps. This greener gold removal method for e-waste is therefore well aligned with, and contributing to, the United Nations Sustainable Development Goal 12: Ensure sustainable consumption and production patterns.

Design and validation of cell-based potency assays for frataxin supplementation treatments

Friedreich's ataxia (FRDA) is a multisystem, autosomal recessive disorder caused by mutations in the frataxin (FXN) gene. As FRDA is considered a FXN deficiency disorder, numerous therapeutic approaches in development or clinical trials aim to supplement FXN or restore endogenous FXN expression. These include gene therapy, protein supplementation, genome editing or upregulation of FXN transcription. To evaluate efficacy of these therapies, potency assays capable of quantitative determination of FXN biological activity are needed. Herein, we evaluate the suitability of mouse embryonic fibroblasts derived from Fxn G127V knock-in mice (MUT MEFs) as a candidate for cell-based potency assays. We demonstrate that these cells, when immortalized, continue to express minute amounts of Fxn and exhibit a broad range of phenotypes that result from severe Fxn deficiency. Exogenous FXN supplementation reverses these phenotypes. Thus, immortalized MUT MEFs are an excellent tool for developing potency assays to validate novel FRDA therapies. Care needs to be exercised while utilizing these cell lines, as extended passaging results in molecular changes that spontaneously reverse FRDA-like phenotypes without increasing Fxn expression. Based on transcriptome analyses, we identified the Warburg effect as the mechanism allowing cells expressing a minimal level of Fxn to thrive under standard cell culture conditions.

Effect of trace niobium on the microstructure and properties of full-pearlite steel used in the high-strength hypereutectoid wire rods

The present study investigated the impact of 20–80 ppm Nb on the microstructure and properties of hypereutectoid pearlite steel. Remarkably, even trace amounts of Nb exhibited a favorable effect on the refinement of austenite grain. The addition of the Nb element resulted in a reduction of pearlite transition temperature, leading to a decrease of approximately 13% in lamellar spacing and 11% in the size of pearlite colonies. Furthermore, the dragging effect of the Nb element on the carbon atoms in hypereutectoid steel facilitated the control and refinement of network carbides. These findings offer valuable theoretical guidance for the production of ultra-high-strength wire rods. When the Nb content reached 80 ppm, it promoted the precipitation of (Ti, V)C, while simultaneously improving the morphology of square carbides. The grain refining strengthening mechanism accounted for about 70% of the overall strengthening effect observed in high carbon wire rods, with the influence of the Nb element primarily targeting grain refinement. Consequently, the incorporation of minute quantities of Nb presents a promising avenue for the development of ultra-high-strength hypereutectoid wire rods, offering significant potential for enhancing their strength properties.

Celiac disease gut microbiome studies in the third millennium: reviewing the findings and gaps of available literature.

Celiac disease is an autoimmune enteropathy caused by the ingestion of minute amounts of gluten in a subset of genetically predisposed individuals. Its onset occurs at different ages and with variable symptoms. The gut microbiome may contribute to this variability. This review aims to provide an overview of the available research on celiac disease gut microbiome and identify the knowledge gap that could guide future studies. Following the guidelines of the Preferred Reporting Items for Systematic Reviews and Meta-analysis extension for Scoping Reviews (PRISMA-ScR), four electronic databases were searched for literature from January 2000 to July 2023 addressing celiac disease gut microbiome characterization using next-generation sequencing (NGS) approaches. From the 489 publications retrieved, 48 publications were selected and analyzed, focusing on sample characterization (patients, controls, and tissues) and methodologies used for NGS microbiome analysis and characterization. The majority of the selected publications regarded children and adults, and four were randomized clinical trials. The number of participants per study greatly varied and was typically low. Feces were the most frequently tested sample matrix, and duodenal samples were analyzed in one-third of the studies. Incomplete and diverse information on the methodological approaches and gut microbiome results was broadly observed. While similar trends regarding the relative abundance of some phyla, such as Pseudomonadota (former Proteobacteria), were detected in some studies, others contradicted those results. The observed high variability of technical approaches and possibly low power and sample sizes may prevent reaching a consensus on celiac disease gut microbiome composition. Standardization of research protocols to allow reproducibility and comparability is required, as interdisciplinary collaborations to further data analysis, interpretation, and, more importantly, health outcome prediction or improvement.

Comprehensive Mapping of Cyclotides from Viola philippica by Using Mass Spectrometry-Based Strategy.

Cyclotides are plant cyclic peptides with exceptional stability and diverse bioactivity, making them promising candidates for biomedical applications. Therefore, the study of cyclotides has attracted increasing attention in recent years. However, the existing cyclotide detection methods face limitations in sensitivity, accuracy, and reliability. To address these challenges, we developed an integrated strategy using a combination of strong cation exchange chromatography techniques for removing interfering small molecules, Orbitrap Exploris 480 mass spectrometry (OEMS); this is a detection and database searching-based method for cyclotide verification, which greatly improved the sensitivity, accuracy, and reliability of cyclotide identification. This strategy was subsequently employed for cyclotide mapping in Viola with a minute amount of starting tissue, resulting the identification of 65 known and 18 potentially novel cyclotides, which is the largest dataset of cyclotides for Viola philippica. This strategy provided valuable insights into the cyclotide diversity and distribution in V. philippica, with potential applications in drug discovery and other biomedical fields.

Developing a Machine-Learning 'Smart' PCR Thermocycler, Part 1: Construction of a Theoretical Framework.

The use of PCR is widespread in biological fields. Some fields, such as forensic biology, push PCR to its limits as DNA profiling may be required in short timeframes, may be produced from minute amounts of starting material, and may be required to perform in the presence of inhibitory compounds. Due to the extreme high-throughput of samples using PCR in forensic science, any small improvement in the ability of PCR to address these challenges can have dramatic effects for the community. At least part of the improvement in PCR performance could potentially come by altering PCR cycling conditions. These alterations could be general, in that they are applied to all samples, or they could be tailored to individual samples for maximum targeted effect. Further to this, there may be the ability to respond in real time to the conditions of PCR for a sample and make cycling parameters change on the fly. Such a goal would require both a means to track the conditions of the PCR in real time, and the knowledge of how cycling parameters should be altered, given the current conditions. In Part 1 of our work, we carry out the theoretical groundwork for the ambitious goal of creating a smart PCR system that can respond appropriately to features within individual samples in real time. We approach this task using an open qPCR instrument to provide real-time feedback and machine learning to identify what a successful PCR 'looks like' at different stages of the process. We describe the fundamental steps to set up a real-time feedback system, devise a method of controlling PCR cycling conditions from cycle to cycle, and to develop a system of defining PCR goals, scoring the performance of the system towards achieving those goals. We then present three proof-of-concept studies that prove the feasibility of this overall method. In a later Part 2 of our work, we demonstrate the performance of the theory outlined in this paper on a large-scale PCR cycling condition alteration experiment. The aim is to utilise machine learning so that throughout the process of PCR automatic adjustments can be made to best alter cycling conditions towards a user-defined goal. The realisation of smart PCR systems will have large-scale ramifications for biological fields that utilise PCR.