Fecal Microorganisms Research Articles

Evaluation of fecal microorganisms of children with cleft palate before and after palatoplasty

This study isolated and quantified intestinal bacteria of children with cleft palate before and after palatoplasty. A prospective study was conducted from May 2007 to September 2008 on 18 children with cleft palate, aged one to four years, of both genders, attending a tertiary cleft center in Brazil for palatoplasty, to analyze the effect of surgical palate repair on the concentration of anaerobes Bacteroides sp, Bifidobacterium sp and microaerophiles Lactobacillus sp in feces of infants with cleft palate before and 24 hours after treatment with cefazolin for palatoplasty. There was significant reduction of Lactobacillus sp (p < 0.002), Bacteroides sp (p < 0.001) and Bifidobacterium sp (p = 0.021) after palatoplasty, revealing that surgery and utilization of cefazolin significantly influenced the fecal microbiota comparing collections before and after surgery. However, due to study limitations, it was not possible to conclude that other isolated factors, such as surgical stress, anesthetics and other medications used in palatoplasty might have a significant influence on the microbiota. Considering the important participation of the intestinal microbiota on both local and systemic metabolic and immunological activities of the host, professionals should be attentive to the possible influence of these changes in patients submitted to cleft repair.

Comparative study of fecal bacterial decay models for the simulation of plumes of submarine sewage outfalls

In the literature, analytical models have been shown to be extremely useful for estimating the decay rates of coliform as fecal indicator microorganisms, providing reliable predictions of bathing conditions in coastal and continental waters. Although a number of different formulations have been developed in the literature, each one may only be suitable for specific environments, and no comparison between these methods has ever been carried out. In the present article, a comparative analysis of bacterial decay models, calculated by eight different formulations, was performed in coastal outfall plumes, considering identical environmental conditions of solar radiation, temperature and salinity. A statistical approach was applied to identify the differences in means and in behaviors of the results obtained in the various simulations. The results indicate good agreement between bacterial decay rates calculated with at least four methods that were considered more reliable, and at least one of the models was shown to be suitable for estimating bacterial decay rates under night-time conditions, considering only the combined influences of temperature and salinity. Moreover, under daytime conditions, it provides consistent decay rates when compared with measurements taken in the field.

Quantification of human norovirus GII, human adenovirus, and fecal indicator organisms in wastewater used for irrigation in Accra, Ghana

Quantitative microbial risk assessment (QMRA) is frequently used to estimate health risks associated with wastewater irrigation and requires pathogen concentration estimates as inputs. However, human pathogens, such as viruses, are rarely quantified in water samples, and simple relationships between fecal indicator bacteria and pathogen concentrations are used instead. To provide data that can be used to refine QMRA models of wastewater-fed agriculture in Accra, stream, drain, and waste stabilization pond waters used for irrigation were sampled and analyzed for concentrations of fecal indicator microorganisms (human-specific Bacteroidales, Escherichia coli, enterococci, thermotolerant coliform, and somatic and F+ coliphages) and two human viruses (adenovirus and norovirus genogroup II). E. coli concentrations in all samples exceeded limits suggested by the World Health Organization, and human-specific Bacteroidales was found in all but one sample, suggesting human fecal contamination. Human viruses were detected in 16 out of 20 samples, were quantified in 12, and contained 2-3 orders of magnitude more norovirus than predicted by norovirus to E. coli concentration ratios assumed in recent publications employing indicator-based QMRA. As wastewater irrigation can be beneficial for farmers and municipalities, these results should not discourage water reuse in agriculture, but provide motivation and targets for wastewater treatment before use on farms.

Faecal sludge management with the larvae of the black soldier fly (Hermetia illucens) — From a hygiene aspect

Inadequate and lacking sanitation and wastewater treatment systems can lead to the spreading of diarrhoeal diseases. One contributing factor in the lack of such treatment systems is the lack of economic incentives for stakeholders throughout the service chain. However, the organic fraction of the waste is high in valuable plant nutrients and could be reused in agriculture and as animal feed. For example, grown larvae of the black soldier fly, Hermetia illucens L. (Diptera: Stratiomyidae), make an excellent protein source in animal feed, while the feeding activity of the larvae substantially reduces the dry mass of the treated material. This study examined the effect of black soldier fly larvae on the concentration of pathogenic microorganisms in human faeces and found a 6 log10 reduction in Salmonella spp. in human faeces in eight days, compared with a <2 log10 reduction in the control. No increased reduction was observed for Enterococcus spp., bacteriophage ΦX174 or Ascaris suum ova.

Assessing the efficacy of pre-harvest, chlorine-based sanitizers against human pathogen indicator microorganisms and Phytophthora capsici in non-recycled surface irrigation water

Many factors must be considered in order to develop and implement treatment systems to improve the microbial quality of surface water and prevent the accidental introduction of plant and human pathogens into vegetable crops. The efficacy of chlorine gas (Cl2(g)) and chlorine dioxide (ClO2) injection systems in combination with rapid sand filtration (RSF) was evaluated in killing fecal indicator microorganisms in irrigation water in a vegetable-intensive production area. The efficacy of ClO2 and Cl2(g) was variable throughout the distribution systems and coliform bacteria never dropped below levels required by the United States Environmental Protection Agency for recreational waters. Sampling date and sampling point had a significant effect on the abundance of coliforms in Cl2(g)- and ClO2-treated water. Sampling date and sampling point also had a significant effect on the abundance of generic Escherichia coli in Cl2(g) treated water but only sampling point was significant in ClO2 treated water. Although the waterborne plant pathogen Phytophthora capsici was detected in five different sources of surface irrigation water using baiting and P. capsici-specific PCR, in vitro studies indicated that ClO2 at concentrations similar to those used to treat irrigation water did not reduce mycelial growth or direct germination of P. capsici sporangia and reduced zoospore populations by less than 50%. This study concludes that injection of ClO2 and Cl2(g) into surface water prior to rapid sand filtration is inadequate in reducing fecal indicator microorganism populations and ClO2 ineffectively kills infectious propagules of P. capsici. Additional research is needed to design a system that effectively targets and significantly reduces both plant and human pathogens that are present in surface irrigation water. A model for a multiple barrier approach to treating surface water for irrigation is proposed.

Microbial biomass in faeces of dairy cows affected by a nitrogen deficient diet

Since more than half of the faecal nitrogen (N) originates from microbial N, the objective of the study was to develop a method for quantitatively detecting microbial biomass and portion of living microorganisms in dairy cattle faeces, including bacteria, fungi and archaea. Three techniques were tested: (1) the chloroform fumigation extraction (CFE) method, (2) detection of the fungal cell-membrane component ergosterol and (3) analysis of the cell wall components fungal glucosamine and bacterial muramic acid. In a second step, an N deficient (ND) and an N balanced (NB) diets were compared with respect to the impacts on faecal C and N fractions, microbial indices and digestibility. The mean values of microbial biomass C and N concentrations averaged around 37 and 4.9 mg g−1 DM, respectively. Ergosterol, together with fungal glucosamine and bacterial muramic acid, revealed a 25% fungal C in relation to the total microbial C content in dairy cattle faeces. Changes in ruminal N supply showed significant effects on faecal composition. Faecal concentrations of NDF, hemicelluloses and undigested dietary N and the total C/N ratio were significantly higher in ND treatment compared to the NB treatment. N deficiency was reflected also by a higher microbial biomass C/N ratio. It was concluded that the assessment of microbial indices provides valuable information with respect to diet effects on faecal composition and the successive decomposition. Further studies should be conducted to explore the potentials for minimising nutrient losses from faeces.

Comparison of the Microbial Community Structures of Untreated Wastewaters from Different Geographic Locales

Microbial sewage communities consist of a combination of human fecal microorganisms and nonfecal microorganisms, which may be residents of urban sewer infrastructure or flowthrough originating from gray water or rainwater inputs. Together, these different microorganism sources form an identifiable community structure that may serve as a signature for sewage discharges and as candidates for alternative indicators specific for human fecal pollution. However, the structure and variability of this community across geographic space remains uncharacterized. We used massively parallel 454 pyrosequencing of the V6 region in 16S rRNA genes to profile microbial communities from 13 untreated sewage influent samples collected from a wide range of geographic locations in the United States. We obtained a total of 380,175 high-quality sequences for sequence-based clustering, taxonomic analyses, and profile comparisons. The sewage profile included a discernible core human fecal signature made up of several abundant taxonomic groups within Firmicutes, Bacteroidetes, Actinobacteria, and Proteobacteria. DNA sequences were also classified into fecal, sewage infrastructure (i.e., nonfecal), and transient groups based on data comparisons with fecal samples. Across all sewage samples, an estimated 12.1% of sequences were fecal in origin, while 81.4% were consistently associated with the sewage infrastructure. The composition of feces-derived operational taxonomic units remained congruent across all sewage samples regardless of geographic locale; however, the sewage infrastructure community composition varied among cities, with city latitude best explaining this variation. Together, these results suggest that untreated sewage microbial communities harbor a core group of fecal bacteria across geographically dispersed wastewater sewage lines and that ambient water quality indicators targeting these select core microorganisms may perform well across the United States.

The Bacterial Load of Hospital Discharges (Sidi Kacem, Morocco)

Fecal microorganisms, which are indicators or pathogens, have an optimum growth in the specific conditions of the internal environment animal or human. Therefore, when issued by a host, they result in sudden and drastic changes in the environment. This study aims at bacteriological characterization of the effluent from the provincial hospital in Sidi Kacem. And it shows that the effluent from the hospital contributing to non-regulatory standards ultimately reaches the environment (river wadi floor, animal, vegetable...). The results of bacteriological analyses (Total Coliforms, Fecal Coliforms) about sewage from the provincial hospital depending on the day of rest and work in the city of Sidi Kacem are presented with means respectively 557 × 104 and 328 × 104 in the rest and working days 555 × 104, 342 × 104 and the much higher maximum working days from the day of rest are 64 × 105 and 42 × 105. The results obtained show that the rate of bacteria (CT-CF) exceeds standards recommended by CNS (1994) and WHO (1996, 1997). These results have adverse effects on human life, animal, environment and ecosystem in general.

Identification of Human and Animal Fecal Contamination after Rainfall in the Han River, Korea

We investigated the effect of rainfall on the levels and sources of microbial contamination in the Han River, Korea. Thirty-four samples were collected at two sampling sites located upstream and downstream in the river from July 2010 to February 2011. Various fecal indicator microorganisms, including total coliform, fecal coliform, Escherichia coli, Enterococcus spp., somatic and male-specific (F+) coliphage, and four major enteric viruses were analyzed. Rainfall was positively correlated with the levels of fecal coliform and norovirus at both sampling sites. Additionally, rainfall was positively correlated with the levels of total coliform, E. coli, Enterococcus spp., and F+ coliphage at the upstream site. To identify the source of fecal contamination, microbial source tracking (MST) was conducted using both male-specific (F+) RNA coliphage and the Enterococcus faecium esp gene as previously described. Our results clearly indicated that the majority of fecal contamination at the downstream Han River site was from a human source. At the upstream sampling site, contamination from human fecal matter was very limited; however, fecal contamination from non-point animal sources increased following rainfall. In conclusion, our data suggest that rainfall significantly affects the level and source of fecal contamination in the Han River, Korea.

Glacial Transport of Human Waste and Survival of Fecal Bacteria on Mt. McKinley’s Kahiltna Glacier, Denali National Park, Alaska

Each year, over 1000 climbers attempt an ascent of Mt. McKinley via the West Buttress, located on the 77-km-long Kahiltna Glacier in Denali National Park and Preserve, Alaska. Climbers generate over two metric tons of human waste annually, the majority of which is disposed of in crevasses. To assess potential health impacts of this management practice, we conducted field studies and a laboratory experiment to document the persistence of fecal bacteria in a variety of glacial microclimates. Low concentrations of fecal bacteria found in water samples collected over two melt seasons from the Kahiltna River support the argument that bacteria can survive in a glacial environment for an extended period of time. We documented Kahiltna Glacier surface velocities and used a simple flow model to predict the time and place that human waste will emerge in the ablation zone. Based on surface velocities we predict that waste buried in major camps will emerge at the glacier surface in as little as 71 years after traveling 28 km downstream. Our results show fecal microorganisms are persistent in a glacial environment, these pathogens pose a minor threat to human health, and buried human waste can be expected to emerge at the glacier surface within decades.

Effects of Different Levels of Fermented Oat on Growth Performance, Nutrientdigestibility, Diarrhea Incidence, Fecal Microorganisms and Emission Gas in Weaned Pigs

This study was conducted to investigate the effects of different levels of fermented oat meal on growth performance, diarrhea incidence, fecal microorganisms, and emission gas in weaned pigs. A total of 80 crossbred piglets (7.31 ± 0.24 kg) weaned at 21 days of age were assigned to treatments in a randomized complete block design based on the initial body weight (BW). This experiment included 2 phases. In the first phase (from 0 to 21 d), there were 5 treatments: T1 (15% nature oat), T2 (3.7% fermented oat + 11.3% nature oat), T3 (7.5% fermented oat + 7.5% nature oat), T4 (11.3% fermented oat + 3.7% nature oat), T5 (15% fermented oat). In the second phase (from 21 to 35 d): T1 (7% nature oat), T2 (1.75% fermented oat + 5.25% nature oat), T3 (3.5% fermented oat + 3.5% nature oat), T4 (5.25% fermented oat + 1.75% nature oat), T5 (7% fermented oat). Pigs had access to feed and water ad libitum and their BW and average daily feed intake (ADFI) were measured for each phase throughout the duration of the experiment. During the first phase,the use of 7.5%, 11.3% and 15% fermented oat to replace nature oat improvedaverage daily gain (ADG) and gain/feed ratio (G/F) (P<0.05). . During the second phase, the use of 3.5%, 5.3%, and 7% fermented oat to substitute nature increased ADG. Entire period of this experiment, T3 and T4 treatments were presented higher ADG, G/F compared with T1 and T2 treatments. Different levels of fermented oat didnot affect diarrhea incidence score, digestibility, fecal microorganisms and emission gas. It is concluded thatfermented oat can serve as an alternative feed ingredient for possibly replacing the use of nature oat.

Phosphorus and faecal bacteria in runoff from horse paddocks and their mitigation by the addition of P-sorbing materials

The growing popularity of horse keeping is accompanied by an increase of phosphorus (P) and faecal micro-organisms from outdoor paddocks. We used an indoor rainfall simulation to monitor concentrations of dissolved reactive P (DRP) and faecal coliforms in runoff and percolation water from different paddock footings. Drainage water was also monitored from two paddocks constructed of woodchips. Sand retained more DRP (p&lt;0.0001) and coliforms from percolation water than woodchips. Some of the footings were amended with P-sorbing materials, such as [Ca(OH)2], [Fe2(SO4)3], or Fe-gypsum, to retain DRP. High DRP concentrations (17–18 mg l-1) were observed in runoff from a woodchip footing amended earlier with Ca(OH)2 and in sand footing amended with CaCO3. However, application of Fe-gypsum to woodchips decreased the DRP load in percolation water by 83% compared to the footing without Fe-gypsum. Fe compounds were better than Ca compounds. The decrease in coliforms was usually small due to the modest pH changes in the water.

The application of polymerized lipid vesicles as colorimetric biosensors for real-time detection of pathogens in drinking water

The inadequate treatments given to the served waste water which are disposal to the rivers and sea coast are the major sources of faecal Microorganisms and enteric bacterial pathogens. They are among the most serious effects of water pollution bringing risks on public health. None of the current methods for detection of pathogens offer real-time on site solutions, are capable of delivering a simple visual detection signal, or can be easily instrumented as an indicator of the presence of a pathogen in water. The use of lipid vesicles incorporating Polydiacetylenes (PDAs) for the development of biosensors for "real-time" detection of pathogens has become an alternative, due to its potential for simple colorimetric response against harmful environmental effectors. However, its actual application in the field has been complicated because lipid vesicles are unable to respond specifically to environmental changes. In this paper, we report several experimental trials leading to improved response in the detection of flagellated pathogens in drinking water. Chromatic biomimetic membranes of TRCDA/DMPC and TRCDA/DMPC/Tryptophan were used in agar and liquid media, which were challenged with different amounts of Escherichia coli and Salmonella typhimurium . In addition, the effect of some divalent cations on the interaction with vesicles TRCDA/DMPC was investigated. The results indicated an improvement in the response times, both visually and quantitatively, through the use of TRIS-EDTA and proper growing conditions for E. coli and Salmonella . With the application of both conditions, it was possible by incubation at 35ºC to promote bacterial growth, therefore avoiding a dramatic effect on the colour change over control samples which may invalidate the test. Our experiments indicated that the minimum bacterial concentration necessary to produce the transition from blue to red on the vesicles as biosensor approaches 10 8 CFU/ml within 4 hrs, faster than traditional methods such as MPN or plate count agar. We present here incubations of samples of contaminated water at 35ºC, in agar plates containing chromatic biomimetic membranes of TRCDA/DMPC. A measurable colour transition is obtained within a reaction time of four hrs, which compares favourably with detection times between seven to 24 hrs corresponding to available tests.

Monitoring Recreational Waters: How to Integrate Environmental Determinants

Recreational waters are associated with a higher risk of disease for people engaged in activities that bring them into contact with these waters. The primary cause of contamination of recreational waters is fecal microorganisms, which may originate from various sources and involve several modulating factors, making it a complex public health and en- vironmental issue. Monitoring recreational water quality should include two key components: Microbial water testing and monitoring environmental determinants associated with higher risks of contamination. Conducting both activities provides the foundation for a comprehensive assessment according to risk and the actual level of fecal pollution and thus could promote good management actions to ensure safe water quality. Nevertheless, monitoring of environmental determinants is rarely fully integrated in monitoring programs and is also harder to achieve, especially when water pol- lution is mainly associated with nonpoint sources. In order to achieve identification and monitoring of environmental determinants associated with fecal contamination of recreational waters, some specific steps should be followed and some questions must be answered. The objective of this review article is to present current knowledge on this topic and to suggest and discuss recommendations. Potential sources of contamination and factors able to modulate them should be identified and measured after the geographical area influencing fecal contamination of recreational water has been delineated. Statistical models have been developed to identify the relative importance of these environmental characteristics on fecal pollution of recreational waters but they do not allow for a full comprehension of the exact processes leading to this pollution, thus other methods should also be used to better understand these processes.

Selective grazing by protists upon enteric bacteria in an aquatic system.

It is well known that protozoan grazing can be an important agent of mortality for suspended bacteria, both in marine and freshwater environments. Considering that the presence of fecal contamination is a frequent phenomenon in tríese environments, and that Escherichia coli and the genus Enterococcus are indicators of microbiological water quality, the effect of protozoan grazing on E. coli and Enterococcus faecalis in Los Padres Lagoon waters (Buenos Aires, Argentina, 37° 56'30" S, 57° 44'30" W) was herein analyzed. Microcosm assays were carried out, simulating lacustrine conditions, confronting suspensions of autochthonous bacterivorous protozoans with suspensions of autochthonous and collection strains of E. coli and E. faecalis, combined and individually. Daily counts were made for evaluating bacterial survival and the number of ciliates. The results obtained indicate that there is a preferential sequence for bacterial removal in the water, where E. faecalis is more grazing-resistant than E. coli. Moreover, it was noted that the origin of bacterial strains influenced their sensitivity for grazing, at least in the short term (e.g. the collection strains were less affected). We conclude that protozoan grazing can modify the relative abundance of fecal indicator microorganisms, thus altering the results of water quality studies.

Amoeba-Related Health Risk in Drinking Water Systems: Could Monitoring of Amoebae Be a Complementary Approach to Current Quality Control Strategies?

Culture-based methods for fecal indicator microorganisms are the standard protocol to assess potential health risk from drinking water systems. However, these traditional fecal indicators are inappropriate surrogates for disinfection-resistant fecal pathogens and the indigenous pathogens that grow in drinking water systems. There is now a range of molecular-based methods, such as quantitative PCR, which allow detection of a variety of pathogens and alternative indicators. Hence, in addition to targeting total Escherichia coli (i.e., dead and alive) for the detection of fecal pollution, various amoebae may be suitable to indicate the potential presence of pathogenic amoeba-resisting microorganisms, such as Legionellae. Therefore, monitoring amoeba levels by quantitative PCR could be a useful tool for directly and indirectly evaluating health risk and could also be a complementary approach to current microbial quality control strategies for drinking water systems.

Impact of rainfall on microbial contamination of surface water

PurposeIncreased annual precipitation and more frequent episodes with heavy precipitation are expected in Norway due to climate change. The purpose of this paper is to use two case studies to investigate effects of precipitation on the amounts of faecal indicator bacteria and parasitic protozoa (Cryptosporidium and Giardia) loaded to surface waters from catchment areas exposed to different faecal sources.Design/methodology/approachIn the first case study, the loads of faecal indicator bacteria and Cryptosporidium and Giardia, were investigated in relation to precipitation in a stream from a small valley where cattle and sheep are grazed. In the second case study, historical data (monthly values from 2004‐2009) regarding faecal coliforms and water flow in five tributaries (urban and rural) of a lake used as a drinking water source, were used for calculating loads of faecal indicator bacteria. These loads were evaluated in relation to historical data on precipitation. Additional sampling during/after rainfall, including analysis of samples for Cryptosporidium and Giardia, was performed.FindingsThe study visualises how heavy rainfall may increase the load of faecal microorganisms and potential pathogens in Norwegian water sources.Originality/valueThis study provides supplementary information about microbial contamination (including by parasites) of Norwegian surface waters during or after rainfall. This is useful input for decision making regarding protection of vulnerable water sources and for risk assessments. Data are also provided for evaluation of water treatment needs for Norwegian municipalities and waterworks responsible for providing safe drinking water under future climatic conditions.

Sustainable microbial water quality monitoring programme design using phage-lysis and multivariate techniques

Contamination of surface waters is a pervasive threat to human health, hence, the need to better understand the sources and spatio-temporal variations of contaminants within river catchments. River catchment managers are required to sustainably monitor and manage the quality of surface waters. Catchment managers therefore need cost-effective low-cost long-term sustainable water quality monitoring and management designs to proactively protect public health and aquatic ecosystems. Multivariate and phage-lysis techniques were used to investigate spatio-temporal variations of water quality, main polluting chemophysical and microbial parameters, faecal micro-organisms sources, and to establish ‘sentry’ sampling sites in the Ouse River catchment, southeast England, UK. 350 river water samples were analysed for fourteen chemophysical and microbial water quality parameters in conjunction with the novel human-specific phages of Bacteroides GB-124 (Bacteroides GB-124). Annual, autumn, spring, summer, and winter principal components (PCs) explained approximately 54%, 75%, 62%, 48%, and 60%, respectively, of the total variance present in the datasets. Significant loadings of Escherichia coli, intestinal enterococci, turbidity, and human-specific Bacteroides GB-124 were observed in all datasets. Cluster analysis successfully grouped sampling sites into five clusters. Importantly, multivariate and phage-lysis techniques were useful in determining the sources and spatial extent of water contamination in the catchment. Though human faecal contamination was significant during dry periods, the main source of contamination was non-human. Bacteroides GB-124 could potentially be used for catchment routine microbial water quality monitoring. For a cost-effective low-cost long-term sustainable water quality monitoring design, E. coli or intestinal enterococci, turbidity, and Bacteroides GB-124 should be monitored all-year round in this river catchment.

Effects of short term fasting on the evolution of fecal peritonitis in mice

To investigate the effect of 72 hours food suppression on the evolution of fecal peritonitis in mice evaluating the mortality and measuring the number and size of abscesses formed into the peritoneal cavity. Mice receiving commercial diet and water ad libitum (control group, N=35) and mice fasted during 72 h (N=35), receiving only water ad libitum, were inoculated by i.p. route, with 4uL/g body weight of a fecal suspension diluted 1:6 or 1:9 in 0.15M NaCl solution (1:6 dilution, 22 controls and 18 fasted; 1:9 dilution, 13 controls and 17 fasted). Animals were followed up until two weeks after fecal inoculation, when the survivors were euthanized for evaluation of the number and size of intra-peritoneal abscesses. Mortality was evaluated by Kaplan Meyer curves. Mortality was significantly higher in fasted groups than in controls. However the number and size of abscesses were significantly less in fasted groups than in controls. Seventy two hours food suppression increased the susceptibility to endotoxic shock (high mortality after peritonitis induction) and the resistance to infection with fecal microorganisms (less number and size of intra-peritoneal abscesses).

Incidence and prevalence of microbial indicators and pathogens in ovine faeces in New Zealand

The incidence and prevalence of micro-organisms in ovine faeces as potential sources of diffuse pollution to natural waters were determined. Faecal samples from lambs at slaughter (N=105) and sheep at pasture (N=220) were collected. E. coli, enterococci and Campylobacter spp. were enumerated in lambs (6.04×108, 1.44×107 and 3.3×105 g−1 respectively) and sheep (1.62×107, 6.8×105 and 2.08×103 g-1 respectively). Campylobacter spp., Salmonella spp. and Shiga toxin producing E. coli (STEC) were present in 80.9%, 1.9% and 3.8% of lamb samples, and 30.4%, 0% and 0.9% of sheep samples respectively. Cryptosporidium spp. and Giardia spp. were present in 28.6% and 37.1% of the lamb faecal samples, and 3.6% of sheep samples were positive for Cryptosporidium spp. The results of this study will be incorporated into models for estimating the potential impact of ovine faeces on natural waters.