Community Of Microorganisms Research Articles

Effect of mineral fertilizers on microorganisms community characteristic during leaf litter decomposition under Pinus massoniana in a subtropical forest

Leaf litter decomposition is a crucial ecological process driven by bacteria and fungi, which release extracellular enzymes. However, the effects of mineral fertilizer application on microbial aspects in forest ecosystems are unclear. We hypothesized that mineral fertilizers significantly affect bacteria and fungi in terms of function, diversity, structure, and composition. We also proposed that microbial phyla respond more to fertilizers than untreated conditions and that there's a strong correlation between bacteria, fungi, and chemical factors under fertilizer treatments. Using next-generation sequencing, we investigated microbial responses in a Masson pine plantation across four sampling times (90, 180, 270, and 360 days) with control (CK), N fertilization (+N), N and P fertilization (+NP), and N, P, K fertilization (+NPK). Mineral fertilizer impacts were more pronounced on bacterial diversity than fungal diversity, especially in alpha diversity. Proteobacteria, Firmicutes, Bacteroidetes, Acidobacteria, and Cyanobacteria (11.76, 0.34, 0.08, 1.86, 7.17 %), respectively, responded positively to fertilizers, while only Ascomycota and Basidiomycota (14.77, 16.51 %), respectively, were influenced among fungal phyla. Beta diversity analysis revealed distinct groupings of bacterial and fungal communities over time. Redundancy analysis indicated shifts in community structure linked to soil chemical properties. Our findings concluded that NPK fertilizer might be a preferred management option, providing valuable insights for fertilization strategies in subtropical forest ecosystems, benefiting both surface and belowground components. However, the application of mineral fertilizer requires careful consideration of the implications and limitations on microbial communities.

Anti-racism, racism, and the microbiome: A review

Debates about the relationship between racism, anti-racism, and the new life sciences calls for further inquiry into the growing popularity of microbiome science. Scientists define human microbiomes as unique communities of microorganisms that vary across body-sites, lifespan, location, and lifestyle. As new biomarkers for human diversity, scientists argue that microbiomes environmentally mediate development and health, which also reframes classical models of disease. In the small subset of literature that engages the stakes for race, the implications of human microbiome science are posed in terms of paradoxically reifying racism and empowering anti-racist science. To illustrate this duality, I first review the two most pervasive critiques of explicitly and implicitly reproducing racial categories in human microbiome science. Then, I show how some of the same critics embrace other versions of microbiome science as a tool to fight for environmental justice and de-essentialize race. However, in the next section, I challenge this distinction by arguing that even the most promising aspect of microbiome science as biosocial “becoming” can reproduce racial hierarchies too. In sketching limits in the current literature, I conclude by suggesting that critical engagements with biosocial formations of race need to further examine the relational formation of whiteness and that such inquiry requires elevating Black and Indigenous scholars.

Exercise perspective: Benefits and mechanisms of gut microbiota on the body.

Gut microbiota refers to the vast and diverse community of microorganisms residing in the intestines. Factors such as genetics, environmental influences (e.g., exercise, diet), and early life experiences (e.g., infant feeding methods) can all affect the ecological balance of gut microbiota within the body. Dysbiosis of the gut microbiota is associated with extra-intestinal diseases such as Parkinson's syndrome, osteoporosis, and autoimmune diseases, suggesting that disturbances in gut microbiota may be one of the causes of these diseases. Exercise benefits various diseases, with gut microbiota playing a role in regulating the nervous, musculoskeletal, and immune systems. Gut microbiota can impact the body's health status through the gut-brain axis, gut-muscle axis, and immune pathways. Moderate-intensity aerobic exercise can increase the quantity of gut microbiota and change microbial abundance, although short-term exercise does not significantly affect the alpha diversity of the microbiota. Resistance exercise also does not have a significant regulatory effect on gut microbiota.

Gut microbiota in professional and amateur athletes: the impact of physical activity on microbiota - what do we know? A literature review

Introduction and purpose: The gut microbiota, a diverse community of microorganisms inhabiting our intestines, is pivotal for human health. This intricate microbial ecosystem influences various aspects of health, including digestion, metabolism, immune function and even mental well-being. Comprehending connections between physical activity and gut microbiota is vital for public health advocacy, particularly amidst the rise of sedentary lifestyle. The nature of modern lifestyles contributes to decreased physical activity, exacerbating the health consequences associated with a disrupted gut microbiota. In conditions such as type 2 diabetes, hypertension, and obesity, alterations in the composition and function of the gut microbiota have been observed. These changes, often referred to as dysbiosis, are characterized by a decrease in microbial diversity and shifts in the relative abundance of certain bacterial taxa. The aim of this study is to provide a comprehensive overview of the current state of knowledge regarding the impact of professional and amateur physical activity on gut microbiota. Description of the state of knowledge: Recent research reveals a significant link between physical activity and the gut microbiota, hinting at its potential health implications. Studies indicate that exercise may promote greater microbial diversity in the gut, contributing to improved metabolic balance and reduced inflammation. Summary: Exercise can modulate the composition and diversity of gut microbes, promoting a more beneficial profile associated with enhanced metabolic health and immune function. Ongoing research in this area could guide the development of exercise plans that enhance not just physical fitness but also gut health and overall well-being.

Gut microbiota in professional and amateur athletes: the impact of physical activity on microbiota - what do we know? A literature review

Introduction and purpose: The gut microbiota, a diverse community of microorganisms inhabiting our intestines, is pivotal for human health. This intricate microbial ecosystem influences various aspects of health, including digestion, metabolism, immune function and even mental well-being. Comprehending connections between physical activity and gut microbiota is vital for public health advocacy, particularly amidst the rise of sedentary lifestyle. The nature of modern lifestyles contributes to decreased physical activity, exacerbating the health consequences associated with a disrupted gut microbiota. In conditions such as type 2 diabetes, hypertension, and obesity, alterations in the composition and function of the gut microbiota have been observed. These changes, often referred to as dysbiosis, are characterized by a decrease in microbial diversity and shifts in the relative abundance of certain bacterial taxa. The aim of this study is to provide a comprehensive overview of the current state of knowledge regarding the impact of professional and amateur physical activity on gut microbiota. Description of the state of knowledge: Recent research reveals a significant link between physical activity and the gut microbiota, hinting at its potential health implications. Studies indicate that exercise may promote greater microbial diversity in the gut, contributing to improved metabolic balance and reduced inflammation. Summary: Exercise can modulate the composition and diversity of gut microbes, promoting a more beneficial profile associated with enhanced metabolic health and immune function. Ongoing research in this area could guide the development of exercise plans that enhance not just physical fitness but also gut health and overall well-being.

Cadmium/zinc stresses and plant cultivation influenced soil microflora: a pot experiment conducted in field

It’s of great challenge to address for heavy metal-contaminated soil. Once the farmland is contaminated with heavy metals, the microbial ecology of the plant rhizosphere will change, which in turn impacts crop productivity and quality. However, few studies have explored the effects of heavy metals on plant rhizosphere microbes in farmland and the role that plant cultivation plays in such a phytoremediation practice. In this study, the impacts of comfrey (Symphytum officinale L.) cultivation and the stresses of cadmium/zinc (Cd/Zn) on rhizosphere soil microflora were examined. Microbial DNA was collected from soils to evaluate the prevalence of bacteria and fungi communities in rhizosphere soils. High-throughput 16 S rRNA sequencing was used to determine the diversity of the bacterial and fungal communities. The results showed that growing comfrey on polluted soils reduced the levels of Cd and Zn from the vertical profile. Both the comfrey growth and Cd/Zn stresses affected the community of rhizosphere microorganisms (bacteria or fungi). Additionally, the analysis of PCoA and NMDS indicated that the cultivation of comfrey significantly changed the bacterial composition and structure of unpolluted soil. Comfrey cultivation in polluted and unpolluted soils did not result in much variance in the fungi’s species composition, but the fungal compositions of the two-type soils were noticeably different. This work provided a better understanding of the impacts of Cd/Zn stresses and comfrey cultivation on rhizosphere microbial community, as well as new insight into phytoremediation of heavy metal-contaminated soils.

Both the scion and rootstock of grafted grapevines influence the rhizosphere and root endophyte microbiomes, but rootstocks have a greater impact

BackgroundSoil microorganisms play an extensive role in the biogeochemical cycles providing the nutrients necessary for plant growth. Root-associated bacteria and fungi, originated from soil, are also known to influence host health. In response to environmental stresses, the plant roots exude specific molecules influencing the composition and functioning of the rhizospheric and root microbiomes. This response is host genotype-dependent and is affected by the soil microbiological and chemical properties. It is essential to unravel the influence of grapevine rootstock and scion genotypes on the composition of this microbiome, and to investigate this relationship with plant growth and adaptation to its environment. Here, the composition and the predicted functions of the microbiome of the root system were studied using metabarcoding on ten grapevine scion-rootstock combinations, in addition to plant growth and nutrition measurements.ResultsThe rootstock genotype significantly influenced the diversity and the structure of the bacterial and fungal microbiome, as well as its predicted functioning in rhizosphere and root compartments when grafted with the same scion cultivar. Based on β-diversity analyses, 1103P rootstock showed distinct bacterial and fungal communities compared to the five others (RGM, SO4, 41B, 3309 C and Nemadex). The influence of the scion genotype was more variable depending on the community and the investigated compartment. Its contribution was primarily observed on the β-diversity measured for bacteria and fungi in both root system compartments, as well as for the arbuscular mycorrhizal fungi (AMF) in the rhizosphere. Significant correlations were established between microbial variables and the plant phenotype, as well as with the plant mineral status measured in the petioles and the roots.ConclusionThese results shed light on the capacity of grapevine rootstock and scion genotypes to recruit different functional communities of microorganisms, which affect host growth and adaptation to the environment. Selecting rootstocks capable of associating with positive symbiotic microorganisms is an adaptation tool that can facilitate the move towards sustainable viticulture and help cope with environmental constraints.

Bacillus-derived consortium enhances Ginkgo biloba's health and resistance to Alternaria tenuissima.

Bacillus, as a plant-growth-promoting rhizobacteria, can enhance the resistance of plants to phytopathogens. In our study, Bacillus strains showing excellent biocontrol were screened and used to control ginkgo leaf blight (Alternaria tenuissima). Four biocontrol Bacillus strains-Bsa537, Bam337, Bso544, and Bsu503-were selected from 286 isolates based on their capacity to inhibit pathogens and promote plant growth. The four Bacillus strains significantly improved the resistance of ginkgo to leaf blight. This was especially the case when the four strains were used as a mixture, which contributed to a decrease in lesion area of >40%. Hence, a mixture of Bacillus strains was used to control ginkgo leaf blight in the field. Treatment efficiency varied from 30% to 100% (average 81.5%) and was higher than that of the control (-2% to -18%, average - 8.5%); the antioxidant capacity of the treated ginkgo was also stronger. In addition, ginkgo biomass increased as a result of treatment with the Bacillus mixture, including leaf weight, area, thickness, number of lateral roots and root weight. Furthermore, the Bacillus mixture improved the ginkgo rhizosphere soil by boosting the number of beneficial microorganisms, lowering the number of pathogens and hastening soil catabolism. The Bacillus mixture improved the health status of ginkgo by protecting it from pathogen attack, promoting its growth and improving the microorganism community in the rhizosphere. This work closes a technological gap in the biological control of ginkgo leaf blight, investigates application methods for compound Bacillus biofertilizers and establishes a framework for the popularity and commercialization of these products. © 2024 Society of Chemical Industry.

Biofilm inhibition/eradication: exploring strategies and confronting challenges in combatting biofilm.

Biofilms are complex communities of microorganisms enclosed in a self-produced extracellular matrix, posing a significant threat to different sectors, including healthcare and industry. This review provides an overview of the challenges faced due to biofilm formation and different novel strategies that can combat biofilm formation. Bacteria inside the biofilm exhibit increased resistance against different antimicrobial agents, including conventional antibiotics, which can lead to severe problems in livestock and animals, including humans. In addition, biofilm formation also imposes heavy economic pressure on industries. Hence it becomes necessary to explore newer alternatives to eradicate biofilms effectively without applying selection pressure on the bacteria. Excessive usage of antibiotics may also lead to an increase in the number of resistant strains as bacteria employ an advanced antimicrobial resistance mechanism. This review provides insight into multifaceted technologies like quorum sensing inhibition, enzymes, antimicrobial peptides, bacteriophage, phytocompounds, and nanotechnology to neutralize biofilms without developing antimicrobial resistance (AMR). Furthermore, it will pave the way for developing newer therapeutic agents to deal with biofilms more efficiently.

Emerging Approaches for Mitigating Biofilm-Formation-Associated Infections in Farm, Wild, and Companion Animals.

The importance of addressing the problem of biofilms in farm, wild, and companion animals lies in their pervasive impact on animal health and welfare. Biofilms, as resilient communities of microorganisms, pose a persistent challenge in causing infections and complicating treatment strategies. Recognizing and understanding the importance of mitigating biofilm formation is critical to ensuring the welfare of animals in a variety of settings, from farms to the wild and companion animals. Effectively addressing this issue not only improves the overall health of individual animals, but also contributes to the broader goals of sustainable agriculture, wildlife conservation, and responsible pet ownership. This review examines the current understanding of biofilm formation in animal diseases and elucidates the complex processes involved. Recognizing the limitations of traditional antibiotic treatments, mechanisms of resistance associated with biofilms are explored. The focus is on alternative therapeutic strategies to control biofilm, with illuminating case studies providing valuable context and practical insights. In conclusion, the review highlights the importance of exploring emerging approaches to mitigate biofilm formation in animals. It consolidates existing knowledge, highlights gaps in understanding, and encourages further research to address this critical facet of animal health. The comprehensive perspective provided by this review serves as a foundation for future investigations and interventions to improve the management of biofilm-associated infections in diverse animal populations.

Effect of Simulated Eutrophication of Peatlands on the Microbiome of Utricularia vulgaris L.

Global climate change and increasing human impact are the main factors intensifying eutrophication of peatland ecosystems. Due to the high sensitivity of certain groups of microorganisms, they can serve as indicators of the degree of eutrophication and thereby provide much important information for assessment of the state of peatland ecosystems. However, there is still little knowledge of how changes in the fertility of the environment can affect the microbiome of carnivorous plants in these ecosystems. This study was conducted to verify the following hypotheses: (1) the microbiome of carnivorous plant traps reflects the trophic status of the habitat; (2) an increase in the concentration of biogenic compounds causes a greater increase in the size of microbial communities in the aquatic environment than in the traps. An experiment was carried out in laboratory conditions to determine the effect of simulated eutrophication on the microbiome of Utricularia vulgaris L. An experimental increase in habitat fertility caused an increase in the abundance of bacteria, flagellates, testate amoebae, ciliates, and rotifers, while a decrease in abundance was observed for crustaceans. The increase in the concentration of biogenic compounds also modified the taxonomic composition of communities of microorganisms and small metazoa as well as the strength of trophic relationships; as the trophic level increased, the relationships between bacteria and heterotrophic flagellates; bacteria and testate amoebae; and bacteria and ciliates became stronger.

A Comprehensive Review on Biofilms in Otorhinolaryngology: Understanding the Pathogenesis, Diagnosis, and Treatment Strategies.

Biofilms, structured communities of microorganisms encased in a self-produced matrix, pose significant challenges in otorhinolaryngology due to their role in chronic and recurrent infections affecting the ear, nose, and throat (ENT) region. This review provides an overview of biofilms, emphasizing their formation, pathogenesis, diagnosis, and treatment strategies in otorhinolaryngological disorders. Biofilms are pivotal in chronic rhinosinusitis (CRS), otitis media, laryngopharyngeal reflux (LPR), and tonsillitis, contributing to treatment resistance and disease recurrence. Current diagnostic techniques, including imaging modalities, microbiological cultures, and molecular techniques, are discussed, alongside emerging technologies. Treatment strategies, ranging from conventional antibiotics to alternative therapies, such as biofilm disruptors, phage therapy, and immunomodulation, are evaluated in terms of their efficacy and potential clinical applications. The review underscores the significance of understanding biofilms in otorhinolaryngology and highlights the need for tailored approaches to diagnosis and management to improve patient outcomes.

De la microbiota como “cisne negro”: El extraño caso de los amiloides bacterianos y la neurodegeneración

The human microbiota is the complex community of microorganisms that colonize our epithelia, with a special presence in the large intestine. Recent research links the microbiota to various pathologies, among which I will focus here on neurodegenerative diseases. Metabolites generated by the bacteria of our microbiota have inflammation-modulating properties, interacting with specific receptors in the intestinal epithelium, permeating the underlying tissue and making their way into the blood vessels, thus reaching the central nervous system (CNS). On the other hand, proteins with the potential to aggregate in the form of amyloids, secreted by bacteria to build the matrix that interweaves the biofilms that allow them to persist in the intestine, can use an alternative route to reach the CNS: the parasympathetic endings of the vagus nerve, spreading as prions (infective amyloids), in what is known as the “gut-brain axis”. Once in the CNS, bacterial amyloids can promote aggregation of amyloidogenic proteins involved in neurodegeneration (α-synuclein, Tau, Ab, Sod1). This article reviews and discusses some of the recent experimental evidence that, mainly in animal model systems, assigns a central role for the microbiota in the aetiology of neurodegenerative diseases, as well as the studies performed in the laboratory of the author that have led to the development of a minimal, exclusively bacterial model system that recapitulates essential molecular aspects of a neurodegenerative disease. Keywords: microbiota; neurodegeneration; microbial metabolites; bacterial amyloids; prions; RepA-WH1

Metagenomics reveals the response of desert steppe microbial communities and carbon-nitrogen cycling functional genes to nitrogen deposition.

Nitrogen (N) deposition seriously affects the function of carbon (C) and N cycling in terrestrial ecosystems by altering soil microbial communities, especially in desert steppe ecosystems. However, there is a need for a comprehensive understanding of how microorganisms involved in each C and N cycle process respond to N deposition. In this study, shotgun metagenome sequencing was used to investigate variations in soil C and N cycling-related genes in the desert steppe in northern China after 6 years of the following N deposition: N0 (control); N30 (N addition 30 kg ha-1 year-1): N50 (N addition 50 kg ha-1 year-1). N deposition significantly increased the relative abundance of Actinobacteria (P < 0.05) while significantly decreased the relative abundances of Proteobacteria and Acidobacteria (P < 0.05). This significantly impacted the microbial community composition in desert steppe soils. The annual addition or deposition of 50 kg ha-1 year-1 for up to 6 years did not affect the C cycle gene abundance but changed the C cycle-related microorganism community structure. The process of the N cycle in the desert steppe was affected by N deposition (50 kg ha-1 year-1), which increased the abundance of the pmoA-amoA gene related to nitrification and the nirB gene associated with assimilation nitrite reductase. There may be a niche overlap between microorganisms involved in the same C and N cycling processes. This study provides new insights into the effects of N deposition on soil microbial communities and functions in desert steppe and a better understanding of the ecological consequences of anthropogenic N addition.

Vaginal microbiota transplantation is a truly opulent and promising edge: fully grasp its potential.

Vaginal microbiota transplantation (VMT) is a cutting-edge treatment modality that has the potential to revolutionize the management of vaginal disorders. The human vagina is a complex and dynamic ecosystem home to a diverse community of microorganisms. These microorganisms play a crucial role in maintaining the health and well-being of the female reproductive system. However, when the balance of this ecosystem is disrupted, it can lead to the development of various vaginal disorders. Conventional treatments, such as antibiotics and antifungal medications, can temporarily relieve the symptoms of vaginal disorders. However, they often fail to address the underlying cause of the problem, which is the disruption of the vaginal microbiota. In recent years, VMT has emerged as a promising therapeutic approach that aims to restore the balance of the vaginal ecosystem. Several studies have demonstrated the safety and efficacy of VMT in treating bacterial vaginosis, recurrent yeast infections, and other vaginal conditions. The procedure has also shown promising results in reducing the risk of sexually transmitted infections and preterm birth in pregnant women. However, more research is needed to establish optimal donor selection, preparation, and screening protocols, as well as long-term safety and efficacy. VMT offers a safe, effective, and minimally invasive treatment option for women with persistent vaginal problems. It could improve the quality of life for millions of women worldwide and become a standard treatment option shortly. With further research and development, it could potentially treat a wide range of other health problems beyond the scope of vaginal disorders.

Abstract 2795: An investigation to identify the phylogeny of bacterial communities in the pancreatic cancer microbiome by 16SrDNA sequencing and bioinformatic analysis

Abstract The microbiome refers to the diverse community of microorganisms, including bacteria, viruses, fungi, and other microbes, that inhabit various parts of the human body, such as the skin, mouth, gut, and other mucosal surfaces. The role of the microbiome in cancer is a complex and evolving area of research. While much is still being learned, there is evidence suggesting that the microbiome can influence cancer development and progression in several ways. Some bacteria within the microbiome can produce substances that may be either carcinogenic or protective against cancer. For instance, the conversion of certain dietary components by gut bacteria can produce metabolites that may either promote or inhibit cancer development. Different cancers may be associated with specific alterations in the microbiome, for example, the gut microbiome has been extensively studied in relation to colorectal cancer, with certain bacterial species potentially contributing to the development of this cancer. However, the role of microbiome in Pancreatic cancer is still not extensively studied, henceforth, we did a preliminary study to identify novel bacterial communities around pancreatic cancer microbiome by 16SrDNA sequencing in human pancreatic cancer xenograft model mice. Isolating total genomic DNA from the pancreatic model mice feces, 16SrDNA PCR was done using specific primers and the amplicon obtained as PCR product was confirmed by standard DNA gel electrophoresis with a 1 kb standard ladder to be 1.5kb in size universal for all bacterial 16SrDNA. The amplicon was then sent for Next Generation Sequencing at Zymo Research Corporation (CA). The resultant DNA sequences were analyzed by bioinformatics studies and their phylogeny identified by comparing with 16SrDNA data base. Differential abundance of the bacteria’s of the genera Lachnoclostridium, Robinsoniella, Alistipes, Akkermansia and Lactobacillus were observed analyzing the data along with other bacterial communities. We are currently continuing the project to identify more bacterial communities of significance in the pancreatic cancer microbiome and investigating the role and significance of these bacterial communities in pancreatic cancer tumor microenvironment. Acknowledgement This study was done by a joint collaboration between scientists and students of Elizabeth City State University (ECSU) campus of the University of North Carolina Systems and Mayo Clinic, Jacksonville. This research is supported by the NIH-NIGMS grant#T34GM100831-10 to Dr. H. Banerjee and a University of North Carolina General Administration Grant to Dr. Colby Hunter at ECSU. Citation Format: Hirendra N. Banerjee, Colby Hunter, Narendra Banerjee, Karrington Perry, Khadimou Dia, Anasua Banerjee, Santanu Bhattacharya, Hari Krishnareddy Rachamala, Enfang Wang, Shamit Dutta. An investigation to identify the phylogeny of bacterial communities in the pancreatic cancer microbiome by 16SrDNA sequencing and bioinformatic analysis [abstract]. In: Proceedings of the American Association for Cancer Research Annual Meeting 2024; Part 1 (Regular Abstracts); 2024 Apr 5-10; San Diego, CA. Philadelphia (PA): AACR; Cancer Res 2024;84(6_Suppl):Abstract nr 2795.

Association between the gut microbiota, inflammatory factors, and colorectal cancer: evidence from Mendelian randomization analysis.

Colorectal cancer (CRC) is one of the most common malignant tumors primarily affecting individuals over the age of 50 years. Recent studies have suggested that the dysbiosis of the gut microbiota, a community of microorganisms in the human gut, is closely associated with the occurrence and development of CRC. Additionally, inflammatory factors (IFs) have also been reported to play a significant role in the development of CRC. However, the causal relationships between the gut microbiota, IFs, and CRC remain unclear. In this study, we performed Mendelian randomization (MR) analysis using publicly available genome-wide association study (GWAS) data to explore the causal relationship between the gut microbiota, IFs, and CRC. The gut microbiota GWAS data were obtained from the MiBioGen study, while the IFs GWAS data were derived from the comprehensive analysis of three independent cohorts. Causal relationship analysis was conducted using appropriate instrumental variables (IVs) and statistical models. MR analysis of the gut microbiota and CRC revealed a negative correlation between the Lachnospiraceae species in the gut and CRC risk, while a positive correlation was observed between Porphyromonadaceae species, Lachnospiraceae UCG010 genus, Lachnospira genus, and Sellimonas genus in the gut, and CRC risk. Additionally, we observed a causal relationship between IL-10 and CRC risk. These findings suggest that the dysbiosis of the gut microbiota might be associated with an increased risk of CRC and that specific bacterial groups may play a crucial role in the occurrence and development of CRC. Using MR analysis, this study revealed the causal relationships between the gut microbiota, IFs, and CRC. The negative correlation between the Lachnospiraceae species in the gut and CRC risk, as well as the causal relationship between IL-10 and CRC, provide important clues for the potential roles of gut microbiota regulation and inflammatory factor control in the prevention and treatment of CRC.

Tourmaline-enhanced bioremediation of Cd/BDE-153 co-contaminated soil: Migration, soil microorganism structure and enzyme activities

The efficient remediation of the soil co-contaminated with heavy metals and polybrominated diphenyl ethers (PBDEs) from electronic disassembly zones is a new challenge. Here, we screened a fungus of F. solani (F.s) can immobilize Cd and remove PBDEs. wIt combined with tourmaline enhances the remediation of co- pollutants in the soil. Furthermore, the environment risks of the enhanced technology were assessed through the amount of Cd/BDE-153 in Amaranthus tricolor L. (amaranth) migrated from soil, as well as the changes of soil microorganism communities and enzyme activities. The results showed the combined treatment of tourmaline and F.s made the removal percentage of BDE-153 in rhizosphere soil co-contaminated with BDE-153 and Cd reached 46.5%. And the weak acid extractable Cd in rhizosphere soil decreased by 33.7% compared to control group. In addition, the combined remediation technology resulted in a 32.5% (22.8%), 45.5% (37.2%), and 50.7% (38.1%) decrease in BDE-153 (Cd) content in the roots, stems, and leaves of amaranth, respectively. Tourmaline combined with F.s can significantly increase soil microorganism diversity, soil dehydrogenase and urease activities, further improving the remediation rate of Cd and BDE-153co-pollutants in soil and the biomass of amaranth. This study provides the remediation technology of soil co-contaminated with heavy metal and PBDEs and ensure the maintenance of food security.

The Microcystis-microbiome interactions: origins of the colonial lifestyle.

Species of the Microcystis genus are the most common bloom-forming toxic cyanobacteria worldwide. They belong to a clade of unicellular cyanobacteria whose ability to reach high biomasses during blooms is linked to the formation of colonies. Colonial lifestyle provides several advantages under stressing conditions of light intensity, ultraviolet light, toxic substances and grazing. The progression from a single-celled organism to multicellularity in Microcystis has usually been interpreted as individual phenotypic responses of the cyanobacterial cells to the environment. Here, we synthesize current knowledge about Microcystis colonial lifestyle and its role in the organism ecology. We then briefly review the available information on Microcystis microbiome and propose that changes leading from single cells to colonies are the consequence of specific and tightly regulated signals between the cyanobacterium and its microbiome through a biofilm-like mechanism. The resulting colony is a multi-specific community of interdependent microorganisms.

Valorising lignocellulosic biomass to high-performance electrocatalysts via anaerobic digestion pretreatment

AbstractAnaerobic digestion (AD) was initially evaluated as a potential preprocessing method for preparing biomass-based carbon electrocatalysts in this study. The AD pretreatment succeeded in the structural depolymerization and nitrogen enrichment of Hybrid Pennisetum, which provided favorable conditions to achieve efficient and homogeneous nitrogen introduction due to microorganism community enrichment and provided a porous structure by degradation of the biodegradable components. The resulted biochar exhibited improved physiochemical properties including higher specific surface areas, nitrogen content and graphitization degree than that obtained from pyrolyzing raw biomass. These improvements were positively correlated with the AD time and showed to have enhanced the performance in oxygen reduction reaction and practical microbial fuel cell applications. Amongst the investigated samples, the obtained biochar pretreated by AD for 15 days exhibited the most excellent performance with an onset potential of 0.17 V (VS. saturated calomel electrode) and the maximal power density of 543.2 mW cm−2 assembled in microbial fuel cells. This study suggested applying AD as a new biological pretreatment in the preparation of biomass-based electrocatalysts, and provided a unique pathway for fabricating high-performance biochar-based catalysts by structure optimization and N-containing active sites construction via gentle biological method, thereby providing a cost-effective method to fabricate metal-free catalysts for oxygen reduction reaction. Graphical Abstract