AbstractSyn‐sedimentary compaction or consolidation is an important process in deltaic environments because it affects both the local morphodynamics and hydrodynamics as well as the delta‐scale accommodation space. However, the impact of syn‐depositional compaction on the sediment distribution and the interdependency between different delta areas related to the sediment budget are not fully understood. This paper simulates syn‐depositional compaction using improved 1D grain‐size compaction formulations, integrated into hydrodynamic and morphodynamic modelling software Delft3D. The updated code is used to model sedimentation in mud‐rich deltas under various compaction rate scenarios, which represents the maximum compaction rate potential of sediment that experiences the highest overburden stress in the delta. The simulated deltas are analysed by first classifying their plan‐view area development into depositional elements: distributary channel, underfilled channel, delta plain, mouth bar, delta front and pro delta depositional elements. Then, sedimentation by mass, accommodation space and depositional segment metrics are calculated using the interpreted depositional elements. The results for zero compaction rate scenarios (0 mm year−1) show that limited space‐varying and temporal‐varying accommodation is available to deposit sediment in the delta plain depositional element. Therefore, the sedimentation mainly occurs in the mouth bar depositional element. For low‐mid compaction rate scenarios (0.01–1 mm year−1), the additional syn‐depositional accommodation space in the delta plain depositional element increases sedimentation in this area, limiting sedimentation in the mouth bar depositional element. For high compaction rate scenarios (>1 mm year−1), a further increase in the accommodation space in the delta plain depositional element leads to lateral sedimentation attributed to channel relocation, where the sedimentation mainly occurs in the mouth bar depositional element. This study shows that, although considered a gradual process, syn‐sedimentary compaction does impact long‐term delta evolution by influencing the distribution of sedimentation in the delta.