548 Background: For gastro-intestinal cancers, irinotecan is used as first or second line, either as single agent or in combination therapy. The patient response rate is low and drug resistance mechanism is not understood. Irinotecan like other topoisomerase I inhibitors (camptothecin and their analogues, CPTs) are not MDR substrates, topoI mutations are rare and other potential mechanisms have not been validated. One of the most distinct cellular responses to CPT is the proteolytic degradation of topoI by the ubiquitin proteosomal pathways (UPP) and the rate of topoI degradation determines the drug response. Using a functional proteomic approach we have defined the mechanism of UPP mediated topoI degradation and have identified the molecular determinant of CPT resistance. We have demonstrated that higher basal level of topoI-pS10 drives rapid topoI ubiquitination and degradation in response to CPT. Methods: We have raised mouse monoclonal antibody that specifically binds with topoI-pS10 for immunohistochemistry (IHC) staining of the formalin fixed paraffin embedded (FFPE) slides. In our first cohort of retrospective study, 48 metastatic colorectal cancer tissues were immunostained with anti-topoI-pS10 and nuclear staining was quantitatively analyzed. Results: Data were summarized with descriptive statistics. ROC analysis was used to assess diagnostic characteristics across different thresholds. Mean and median positive nucleation values correlated strongly with drug response. Median nucleation level among non-responders was 69% compared to 9% for responders (Wilcoxon p = 0.0006). ROC analysis demonstrated an optimal threshold between 30-40% nucleation. Using a threshold of 35%, the estimated sensitivity was 82% (95% CI 56-95) and specificity was 77% (57-89). Estimated positive and negative predicted values were 67% (43-85) and 88% (69-97) respectively. We have also got similar results in 80 patient gastric cancer retrospective studies. Conclusions: Basal level of topoI-pS10 can be used as a predictive biomarker for topoI inhibitors. Our IHC based test can be adopted in clinical pathology settings to determine the topoI-pS10 level and stratify the patient population for CPT based therapy.