Mesophotic Zone Research Articles

Using Stable Isotope Analyses to Assess the Trophic Ecology of Scleractinian Corals

Studies on the trophic ecology of scleractinian corals often include stable isotope analyses of tissue and symbiont carbon and nitrogen. These approaches have provided critical insights into the trophic sources and sinks that are essential to understanding larger-scale carbon and nitrogen budgets on coral reefs. While stable isotopes have identified most shallow water (<30 m) corals as mixotrophic, with variable dependencies on autotrophic versus heterotrophic resources, corals in the mesophotic zone (~30–150 m) transition to heterotrophy with increasing depth because of decreased photosynthetic productivity. Recently, these interpretations of the stable isotope data to distinguish between autotrophy and heterotrophy have been criticized because they are confounded by increased nutrients, reverse translocation of photosynthate, and changes in irradiance that do not influence photosynthate translocation. Here we critically examine the studies that support these criticisms and show that they are contextually not relevant to interpreting the transition to heterotrophy in corals from shallow to mesophotic depths. Additionally, new data and a re-analysis of previously published data show that additional information (e.g., skeletal isotopic analysis) improves the interpretation of bulk stable isotope data in determining when a transition from primary dependence on autotrophy to heterotrophy occurs in scleractinian corals.

Mesophotic bioclastics and bioconstructions at the continental shelf of Santos Basin, Brazil

The Santos Basin mesophotic zone comprises one area of 104,915 km2, occupying 78% of the entire basin. Santos Basin is one of the most under stress and sensitive marine regions in the Brazilian territory due to several major ports, Oil & Gas industry, and coastal marine environmental management areas. Scientific literature recognizes that rhodolith beds and biogenic rigid-bottom patches occur on the shelf, but because lack of high-resolution seismic data, these seabed features are not yet wholly mapped at Santos Basin. However, an unprecedented gathering of historical depth sounding points and surface sediment data collection, in conjunction with an extensive field campaign of seabed sampling and sub-bottom shallow seismic records, points out new evidence of biogenic sediment distribution reefal structures in the Santos Basin. The patches of calcareous algae crusts, terraces mounds, pinnacles, and free-living rhodolith beds compose the carbonate facies on the outer shelf. Rugged bottom relief and pinnacles up to 10 m in height correlate with carbonate gravels and sandy areas. Bioconstructions are more common northward and gradually decrease southward. Geomorphological features such as rugged bottom relief might indicate the occurrence of mesophotic bioconstructions off Paraná, and Santa Catarina State coast. The mesophotic bioconstructions have evolved through four stages: 1- LGM fully sposed shelf, 2- sea-level transgression and bioconstrutions pioneers, 3- influence of the La Plata plume at the southern sector, and 4- establishment of mud patches in the northern sector due to local input.

The Dasya baillouviana and D. cryptica complexes (Delesseriaceae, Rhodophyta) in Bermuda with three additional new species from the archipelago.

Continuing molecular studies of the red algal genus Dasya collected off the coast of Bermuda have revealed two new species in the developing D. cryptica species complex-one from each the euphotic and mesophotic zones, D. orae sp. nov. and D. bathypelagica sp. nov., respectively. Furthermore, what was known as D. baillouviana in Bermuda is shown to represent D. hibernae sp. nov., a sibling of D. pedicellata from New England and New York, USA. Despite morphological similarities to the recently described shallow subtidal species from the islands, D. cryptica, molecular sequencing and morphological comparisons demonstrated that a new set of inshore specimens represented D. orae. The larger, new deep-water species, D. bathypelagica, was genetically compared with recent Bermuda collections of D. baillouviana and others worldwide morphologically falling under this epithet and represented a new species also grouping in the D. cryptica complex. The specimens of D. hibernae from Bermuda were shown to be genetically distinct from specimens of D. pedicellata from southern New England and New York. Molecular analyses necessitated the resurrection of D. pedicellata and uncovered undescribed species in the D. baillouviana complex in the western Atlantic. Based upon genetic evidence provided here, the generitype of Rhodoptilum nested among species in the D. baillouviana complex including the generitype. This finding required the synonymy of the genus Rhodoptilum with Dasya and allowed for the reinstatement of D. plumosa. Furthermore, Dasya collinsiana resolved in the lineage including a closely related species to the generitype of Dasysiphonia, necessitating the transfer of this Bermudian species and others worldwide from the genus Dasya to Dasysiphonia.

Video surveys of sea snakes in the mesophotic zone shed light on trends in populations

Declines in abundance of sea snakes have been observed on reefs throughout the Indo-Pacific, although the reasons are unknown. To date, surveys have occurred on shallow reefs, despite sea snakes occurring over a large depth range. It is not known if populations of sea snakes in deep habitats have undergone similar declines. To address this, we analysed deep-water video data from a historical hotspot of sea snake diversity, Ashmore Reef, in 2004, 2016, and 2021. We collected 288 hours of video using baited remote underwater videos and a remotely operated vehicle at depths between 13 and 112 m. We observed 80 individuals of seven species with Aipysurus laevis (n = 30), Hydrophis peronii (n = 8), and H. ocellatus (n = 6) being the most abundant. Five of the species (A. duboisii, A. apraefrontalis, H. ocellatus, H. kingii, and Emydocephalus orarius) had not been reported in shallow waters for a decade prior to our study. We found no evidence of a decline in sea snakes across years in deep-water surveys, although abundances were lower than those in early shallow-water surveys. A comparison of BRUVS data from 2004 and 2016 was consistent with the hypothesis that predation by sharks may have contributed to the loss of sea snakes in shallow habitats. Our study highlights the use of underwater video to collect information on sea snakes in the mesophotic zone and also suggests that future monitoring should include these depths in order to capture a more complete representation of habitats occupied.

A system of marine animal bioconstructions in the mesophotic zone along the Southeastern Italian coast

A widespread and diversified mesophotic system of carbonate bioconstructions along the Southern Adriatic and Ionian Italian coasts is described, providing new data on the distribution, structure and associated megabenthic assemblages of mesophotic Mediterranean bioconstructions. The bioconstructions were detected at six different sites off the coasts of Apulia, in presence of marked morphological escarpments, developing on a basal substrate consisting of meso-Cenozoic carbonate rocks. Two biogenic structure types were observed, one mainly built by the nonsymbiotic scleractinians Phyllangia americana mouchezii and Polycyathus muellerae, at depths between approximately 35 and 55 m, and the other by the oyster Neopycnodonte cochlear, at depths from approximately 40 to 70 m. A total of 52 taxa of megabenthic invertebrates, belonging to 6 phyla, were found on the surface of the mesophotic bioconstructions, thus confirming the role of biodiversity hotspots of these carbonate structures. Megabenthic assemblages showed a remarkable heterogeneity both in pattern of species and abundance, probably depending on both the morphological differences of the seabed and the life traits of the single species. Primary bioconstructors seemed to influence the associated community pattern. This peculiar system deserves sound conservation measures in the light of the holistic ecosystem approach for the management of coastal marine areas.

Novel Antimycin Analogues with Agricultural Antifungal Activities from the Sponge-Associated Actinomycete Streptomyces sp. NBU3104.

Phytopathogenic fungi could affect the growth of agricultural products and result in serious economic losses. To develop novel and potent fungicides, secondary metabolites of an oceanic mesophotic zone Streptomyces sp. NBU3104 was isolated by metabolomics and genomics, which led to the discovery of eight novel antimycins I-P (1-8), including antimycin I (1), six rare acetylated actimycins J-N (2-6), P (8), and an unusual deformylated antimycin O (7). The chemical structures of these metabolites were identified using nuclear magnetic resonance (NMR) spectroscopic analysis, high-resolution electrospray ionization mass spectrometry (HRESIMS) data, and the known reported metabolites in the literature. Their absolute configurations were elucidated by comparison of coupling constant and experimental electronic circular dichroism (ECD) spectra. Among them, compound 1 exhibited excellent inhibitory activities against phytopathogenic fungi, such as Candida albicans, Penicillium expansum, Penicillium citrinum, and Botrytis cinerea. Furthermore, compound 1 could effectively control gray mold of apple in vivo (minimum inhibitory concentration (MIC) = 8 μg/mL). The structure-activity relations of antimycins I-P (1-8) suggested that the aldehyde group in 3-formamidosalicylate unit moiety should be the key factor in their antifungal activities.

Carbonate factory of Pietra di Finale coastal wedge (Miocene): the unusual abundance of stylasterids (Cnidaria, Hydrozoa)

This work focuses on the carbonate factories constituting the Pietra di Finale Fm cropping out in the Ligurian Alps. This unit constituted a mixed carbonate–siliciclastic coastal wedge developed during the Middle Miocene. The carbonate factories characterizing the coastal wedge of the Pietra di Finale clearly differ from those of the coastal mixed systems and carbonate platforms developing during the Miocene elsewhere in the Mediterranean area. Here, in the Ligurian Alps, the euphotic carbonate factory does not show any evidence of seagrass meadows and coral bioconstructions. Zooxanthellate corals are present only as skeletal debris associated with abundant stylasterids. In the mesophotic and oligophotic zones, the typical oligophotic biota of red algae and larger benthic foraminifers are strongly reduced. The coastal wedge of the Pietra di Finale shows an unusual abundance of stylasterids, classically interpreted as deep-water biota. However, in this example, the absence of low-energy textures and other skeletal components suggest a shallow-water origin, probably in the eu- or mesophotic zone. The stylasterids colonized the hard substrates available and were successively removed and resedimented to form the skeletal fraction of the coastal wedge of the Pietra di Finale. The abundance of stylasterids is restricted to particular and limited situations in the Miocene of the Mediterranean, thus suggesting that their abnormal development is controlled by local rather than global factors.

Biology and ecology of lionfish (Pterois volitans) in the Corales de Profundidad Natural National Park, Colombian Caribbean

Lionfish was studied in the mesophotic environment. 237 specimens were observed, most in the upper mesophotic zone. Males were larger than females and differences between sexes in growth models were found. Sixteen prey items were identified, the most important being the teleost families Acanthuridae and Monacanthidae, and the crustacean Penaeidae. The mean of δ13C was -17.08 ± 0.36 ‰ and δ15N was 8.68 ± 0.46 ‰, with no differences between sexes. Lionfish occupies a less extensive isotopic niche in mesophotic environment than in shallow sectors; there is an isotopic niche overlap between sexes. Likewise, lionfish has specialized trophic habits. All specimens were mature and in females regression phase predominated. In females, condition factor (CF), gonadosomatic index (GSI) and hepatosomatic index (HSI) increased with gonadal development, reaching peak in the active spawning phase, and decreasing in regression. Males had a condition factor similar to spawning females, but IGS and IHS were lower

Towards Incorporation of Blue Carbon in Falkland Islands Marine Spatial Planning: A Multi-Tiered Approach

Ecosystem-based conservation that includes carbon sinks, alongside a linked carbon credit system, as part of a nature-based solution to combating climate change, could help reduce greenhouse gas levels and therefore the impact of their emissions. Blue carbon habitats and pathways can also facilitate biodiversity retention, aiding sustainable fisheries and island economies. However, robust blue carbon research is often limited at the scale of regional governance and management, lacking both incentives and facilitation of policy-integration. The remote and highly biodiverse coastal ecosystems and surrounding continental shelf can be used to better inform long-term ecosystem-based management in the vast South Atlantic Ocean and sub-Antarctic, to synergistically protect both unique biodiversity and inform on the magnitude of nature-based benefits they provide. Understanding key ecosystem information such as their location, extent, and condition of habitat types, will be critical in understanding carbon pathways to sequestration, threats to this, and vulnerability. This paper considers the current status of blue carbon data and information available, and what is still required before blue carbon can be used as a conservation management tool integrated in national Marine Spatial Planning (MSP) initiatives. Our research indicates that the data and information gathered has enabled baselines for a number of different blue carbon ecosystems, and indicated potential threats and vulnerability that need to be managed. However, significant knowledge gaps remain across habitats, such as salt marsh, mudflats and the mesophotic zones, which hinders meaningful progress on the ground where it is needed most.

Depth-Dependent Genetic Structuring of a Depth-Generalist Coral and Its Symbiodiniaceae Algal Communities at Campeche Bank, Mexico

Depth-generalist coral holobionts inhabit shallow (0–30 m) and mesophotic (30–150 m) reef zones but may exhibit genetic specialization as a result of adaptations to environmental shifts and/or due to a lack of dispersal across depth. The level of depth-dependent genetic structuring varies across reef locations which may impact the roles mesophotic populations play in the persistence and recovery of metapopulations. A depth-generalist coral species, Montastraea cavernosa, was sampled across a shallow to mesophotic gradient at 10, 15, 25, and 35 m at Alacranes and Bajos del Norte reefs on Campeche Bank, Mexico. Both 2bRAD and ITS2 sequencing were used to quantify genetic differentiation of the coral hosts and community structure of their algal endosymbionts (Family Symbiodiniaceae) across depth zones and between these reefs. Significant levels of M. cavernosa genetic differentiation were identified across depth at both reefs, especially between the shallow (10, 15, and 25 m) and mesophotic (35 m) zones. While Symbiodiniaceae hosted by these corals were predominantly Cladocopium species, both depth and reef location were significant factors driving ITS2 type profiles found within each population. The magnitude of depth-dependent genetic structuring of both the coral and Symbiodiniaceae was much greater at Alacranes, relative to Bajos del Norte, suggesting that the refugia potential of mesophotic communities at Alacranes is limited. However, relatively high levels of horizontal coral connectivity between the two reefs, and Bajos del Norte’s location at the entrance to the Gulf of Mexico suggests that it may play an important role in the maintenance of the coral’s regional metapopulation and should be considered in future assessments of this species’ connectivity dynamics and management.

Drawing the borders of the mesophotic zone of the Mediterranean Sea using satellite data

The 30–150 m bathymetric range is commonly adopted in the literature to constrain the mesophotic zone. However, such depth interval varies depending on sunlight penetration, which is primarily a function of solar radiation incidence and water clarity. This is especially obvious in the Mediterranean Sea with its peculiar biophysical properties. Integrating information on light regime in the estimation of the bathymetric range of the mesophotic zone would provide a more robust definition, orienting conservation actions targeting its ecosystems. We present a first assessment of the spatial and vertical extension of the mesophotic zone in the Mediterranean Sea based upon light penetration, comparing our prediction with literature data. Our study also represents a baseline to monitor future variations in the bathymetric interval associated with the mesophotic zone in the Mediterranean Sea in relation to global changes.

Cheilostomatida (Bryozoa) from the Ionian Apulian coast (Italy) with the description of new species

The mesophotic zone is a relatively poorly studied area of the Mediterranean Sea, drawing great interest by the scientific community in the last years. This zone represents a connection between the shallow water and the deep-sea communities, in which photophilic framework builders (e.g. coralline red algae) are gradually replaced by heterotrophic ones, such as ahermatypic corals and the bivalve Neopycnodonte cochlear. In this habitat the framework-forming organisms produce a hard substrate with a high topographic complexity, hosting a great biodiversity of secondary structuring taxa like bryozoans. During a survey on coralligenous banks in the mesophotic zone in c. 60 m depth off Gallipoli (southern Apulia), epibiotic aggregations of N. cochlear were found on the fans of the hexacoral Savalia savaglia. In the present paper the diversity of cheilostomatid bryozoans hosted by these bivalve aggregations is described and compared with published information on similar nearby habitats. A total of 48 taxa were found, six of which are newly described: Crassimarginatella matildae sp. nov., Micropora biopesiula sp. nov., Haplopoma celeste sp. nov., Schizomavella (Schizomavella) cerranoi sp. nov., Schizomavella (Calvetomavella) biancae sp. nov., and Schizoporella adelaide sp. nov. The species richness known from the southern Apulian shelf at this depth (47 species) is hereby raised to 83 cheilostomatid bryozoans. Moreover, only 12 species are shared with the other localities studied previously, while 36 are restricted to Gallipoli, supporting the hypothesis of a high rate of exclusivity among Apulian sites in terms of species composition. The differences in faunal composition, and particularly the presence of several new species discovered at Gallipoli, show once more that our knowledge of the bryozoan fauna in certain Mediterranean habitats is still incomplete and warrants further studies. https://doi.org/urn:lsid:zoobank.org:pub:DDC82039-EF44-4169-8198-C67F60B14BA0

Deep connections: Divergence histories with gene flow in mesophotic Agaricia corals.

Largely understudied, mesophotic coral ecosystems lie below shallow reefs (at >30 m depth) and comprise ecologically distinct communities. Brooding reproductive modes appear to predominate among mesophotic‐specialist corals and may limit genetic connectivity among populations. Using reduced representation genomic sequencing, we assessed spatial population genetic structure at 50 m depth in an ecologically important mesophotic‐specialist species Agaricia grahamae, among locations in the Southern Caribbean. We also tested for hybridisation with the closely related (but depth‐generalist) species Agaricia lamarcki, within their sympatric depth zone (50 m). In contrast to our expectations, no spatial genetic structure was detected between the reefs of Curaçao and Bonaire (~40 km apart) within A. grahamae. However, cryptic taxa were discovered within both taxonomic species, with those in A. lamarcki (incompletely) partitioned by depth and those in A. grahamae occurring sympatrically (at the same depth). Hybrid analyses and demographic modelling identified contemporary and historical gene flow among cryptic taxa, both within and between A. grahamae and A. lamarcki. These results (1) indicate that spatial connectivity and subsequent replenishment may be possible between islands of moderate geographic distances for A. grahamae, an ecologically important mesophotic species, (2) that cryptic taxa occur in the mesophotic zone and environmental selection along shallow to mesophotic depth gradients may drive divergence in depth‐generalists such as A. lamarcki, and (3) highlight that gene flow links taxa within this relativity diverse Caribbean genus.

Feature-based molecular networking-guided discovery of siderophores from a marine mesophotic zone Axinellida sponge-associated actinomycete Streptomyces diastaticus NBU2966

Ten siderophore-related compounds were isolated by MS/MS-based molecular networking from a mesophotic sponge-associated Streptomyces diastaticus NBU2966. Among them, there were three kinds of siderophores including three undescribed phenol/thiazoline-type compounds, thiazostatin C, methyl thiazostatin B, and pulicatin J, one undescribed phenol/oxazoline-type compound, spoxazomicin E, and one undescribed phenol/oxazoline/thiazoline-type compound, streptochelin A, as well as five known compounds. Pulicatin J and spoxazomicin E were both isolated as a pair of inseparable epimers. The planar structures of all these compounds were determined based on the detailed NMR and HRESIMS spectroscopic analysis, and the absolute configurations of them were assigned by ECD and NMR quantum chemical calculations. Additionally, in vitro antibacterial activities, inhibition of MRSA biofilm formation, and neuroprotective activity for these compounds were tested.

Comparison of recent survey techniques for estimating benthic cover on Caribbean mesophotic reefs

Highly divergent estimates of benthic cover of sponges have been reported for Caribbean mesophotic reefs (90-100 m) based on quadrat point-intercept data collection using 2 methods: visual surveys conducted in situ by technical divers, and analyses of photographs taken by unmanned underwater vehicles (UUVs). The second method has been criticized for potential errors from image distortion caused by variable camera angle relative to the substratum, but without a broader comparison of both methods. We find that studies that have used the UUV-based method are advantageous for a number of reasons, most importantly: (1) access to the full mesophotic zone, (2) higher sample replication, and (3) reduced likelihood of sampling bias. For tech diving surveys conducted at 91 m, i.e. the deepest depth reported using this method but only mid-way through the mesophotic zone, studies have reported particularly high sponge cover (~80 vs. <10% for UUV-based surveys), which may be a consequence of low replication and targeted sampling influenced by very short working times under hazardous conditions. When evaluating benthic abundance metrics from photographs, issues associated with variable substratum angle are common to any topographically complex surface, particularly within a quadrat. Nevertheless, point-intercept estimates are not dependent on quadrat area and are not subject to error due to image distortion or surface complexity. Unlike visual census data from tech dives, UUV photographs can be validated by taxonomic experts and archived for re-analysis. Past tech diving surveys should be repeated using the UUV-based method with greater replication over the full range of the mesophotic zone in order to reconcile divergent estimates of benthic cover.

Depth distributions of benthic and pelagic species highlight the potential of mesophotic and deep habitats to serve as marine refugia

Shallow marine ecosystems are threatened by human impacts. The prospect that deeper environments could serve as refugia is promising but remains uncertain, as it has been evaluated primarily in benthic taxa and on small spatial scales. We use a dataset of all biota from the Gulf of Mexico to evaluate the degree to which species’ occurrences extend across shallow (0-30 m), mesophotic (>30-150 m), and deep (>150 m) environments. High percentages of species inhabit multiple depth zones: 70% of benthic and 81% of pelagic species occurring in the mesophotic zone are also found in the shallow zone, and 45% of benthic and 80% of pelagic species found in the shallow zone extend into mesophotic depths. After accounting for confounding effects using logistic regression, pelagic species have significantly higher odds of extending between depth zones than benthic species. Analyses of species in adjacent 20 m depth bands reveal taxonomically distinct communities of benthic species from 0 to 100 m and pelagic species from 0 to 200 m. Peaks in probability distributions show that pelagic species generally have broader depth ranges than benthic species. Depth ranges that overlap between deeper and shallower zones show that movement of individuals or propagules in one or both directions between these habitats is either occurring now or has occurred in the past. Over the long term, deeper habitats can allow species to escape regional extirpation, and can contribute to the resilience and persistence of coastal ecosystems in the face of increased disturbance in shallow water. This is particularly true when pelagic species are considered.

Black corals (Antipatharia) of the northern Red Sea: ancient predators of the mesophotic reef

Black corals (Antipatharia) are among the most common and diverse taxa in mesophotic and aphotic rocky habitats. Studies of their ecology and biology are limited mostly because of the technical challenges involved in deep-water work. Here, we describe taxonomic traits, habitat, and nutrition of 2 species from the upper mesophotic zone of the northern Red Sea, Gulf of Aqaba, Israel. Our study describes a broader distribution of the branched Antipathes griggi, which to date has been primarily found in the Hawaiian Archipelago. Additionally, a new record is reported regarding the coiled Stichopathes spp. discovered at the upper mesophotic zone. The branched A. griggi were more abundant than the coiled Stichopathes spp. in all explored sites, and differences in light and water flow conditions significantly affected their distribution. Both species lacked symbiotic algae (Symbiodiniaceae). Analysis of the amino acid compound-specific stable isotope signature (AA-CSIA) revealed that both antipatharian species show a high trophic position relative to known mixotrophic and heterotrophic corals. Although both species inhabit the same area and are planktivorous, their carbon signature suggests they have different carbon sources. Our findings imply that antipatharians have a vital role in the trophic dynamics of mesophotic coral ecosystems, a unique habitat whose ecology remains largely unexplored.

Depth-dependent trophic strategies of Caribbean sponges on mesophotic coral reefs

Mesophotic coral reef ecosystems (MCEs) are characterized by gradients in irradiance, temperature and trophic resources. As depth increases on Caribbean mesophotic reefs, particulate organic matter increases while dissolved organic matter decreases, and the increase in particulate organic matter is directly related to the increase in sponge abundances and growth rates on MCEs. To further understand the trophic ecology of sponges, changes in microbiome composition and function, stable isotopic composition and proximate biochemical composition of 4 Caribbean reef sponges (Amphimedon compressa, Agelas tubulata, Plakortis angulospiculatus and Xestospongia muta) were quantified along a shallow to mesophotic depth gradient on Grand Cayman Island. Increases in δ15N for all sponges were observed as depth increased, indicating an increasing reliance on heterotrophic food resources. Species-specific changes in symbiotic microbial community composition were also observed as depth increased, and the predicted functional genes associated with nitrogen and carbon cycling showed species-specific changes between depths. Regardless of species-specific changes in microbiome community structure or function, or whether sponges were classified as high microbial or low microbial abundance, sponges increased their consumption of particulate organic matter with increasing depth into the lower mesophotic zone.

MOLLUSCS FROM THE UPPER MESOPHOTIC ZONE IN A SCARCELY KNOWN REEF OF THE WESTERN EQUATORIAL ATLANTIC

Despite the increasing focus on biodiversity of mesophotic coral ecosystems (MCEs) on a global scale, some biological groups, such as molluscs, are still poorly investigated. The taxonomic diversity of the molluscan fauna of a scarcely known MCE of the Western Equatorial Atlantic, Northeastern Brazil, was surveyed. Samples were collected along the shallower strata of the upper mesophotic zone (between 33-36 m depth). Twenty-one taxa (nine species of gastropods, ten species of bivalves, and two taxa of chitons) were listed, two of which (Novastoa sp. and Thylaeodus sp.) are potential endemic species. A new northern limit of distribution of Persicula moscatellii was established and seven species had new bathymetric records for living specimens (Barbatia domingensis, Barbatia cancellaria, Lamychaena hians, Leiosolenus bisulcatus, Pinctada imbricata, Hipponix incurvus, and Persicula moscatellii). Hipponix costellatus are the most representative species with 49 individuals, followed by Lima caribaea with six individuals. The present work is the first contribution to the knowledge of the molluscan fauna associated with consolidated substrates from this little-known MCE.
 Keywords: mesophotic coral ecosystems, tropical reef, molluscan diversity, Brazilian Province, conventional SCUBA.

A molecular census of early-life stage scleractinian corals in shallow and mesophotic zones.

The decline of coral reefs has fueled interest in determining whether mesophotic reefs can shield against disturbances and help replenish deteriorated shallower reefs. In this study, we characterized spatial (horizontal and vertical) and seasonal patterns of diversity in coral recruits from Dabaisha and Guiwan reefs at Ludao, Taiwan. Concrete blocks supporting terra‐cotta tiles were placed at shallow (15m) and mesophotic (40m) depths, during 2016–2018. Half of the tiles were retrieved and replaced biannually over three 6‐month surveys (short‐term); the remainder retrieved at the end of the 18‐month (long‐term) survey. 451 recruits were located using fluorescent censusing and identified by DNA barcoding. Barcoding the mitochondrial cytochrome oxidase I (COI) gene resulted in 17 molecular operational taxonomic units (MOTUs). To obtain taxonomic resolution to the generic level, Pocillopora were phylotyped using the mitochondrial open reading frame (ORF), resolving eight MOTUs. Acropora, Isopora, and Montipora recruits were identified by the nuclear PaxC intron, yielding ten MOTUs. Overall, 35 MOTUs were generated and were comprised primarily of Pocillopora and, in fewer numbers, Acropora, Isopora, Pavona, Montipora, Stylophora, among others. 40% of MOTUs recruited solely within mesophotic reefs while 20% were shared by both depth zones. MOTUs recruiting across a broad depth distribution appear consistent with the hypothesis of mesophotic reefs acting as a refuge for shallow‐water coral reefs. In contrast, Acropora and Isopora MOTUs were structured across depth zones representing an exception to this hypothesis. This research provides an imperative assessment of coral recruitment in understudied mesophotic reefs and imparts insight into the refuge hypothesis.