In Northeast China, permafrost is controlled by a combination of biotic, climatic, physiographic, and anthropogenic factors. Due to the complexity of these governing or influencing factors, it is challenging to exactly describe the features of the Xing’an permafrost in Northeast China. By integrating remote sensing (RS) and geographic information system (GIS) technologies, we have quantified these influencing factors of permafrost changes as an important approach to understanding the nature of latitudinal and mountain permafrost in Northeast China at the mid-latitudes in the Northern Hemisphere. In this study, we combine Geographical Detector (Geodetector) model, trend analysis, and multi-source RS data to quantify the controlling or influencing factors of permafrost thermal state and of permafrost changes, and explain the interactions among permafrost, environment, and climate. The results indicate that, at the regional scale, changes in the thermal state of permafrost are primarily governed or influenced by mean annual land surface temperature (MALST), precipitation, and snow cover duration (SCD). Topographic factors also affect the spatial patterns of permafrost development. Additionally, in the context of climate warming, the insulation effect of snow cover on the permafrost is weakened, or has been weakening. Moreover, the interactive effects among various factors significantly enhance their explanatory power for changes in the thermal state of permafrost. The study emphasizes the complexity of the interactions among permafrost, climate, and the environment, and highlights the significance of understanding these interactions for regional socio-economic development, ecological management, carbon pool stabilization, and research on future climate change in Northeast China.