The surface morphology of homoepitaxial, MBE-grown GaAs(001)-layers was investigated after annealing at temperatures in the range from 550°C to 620°C by ex situ reflection electron microscopy (REM) and atomic force microscopy (AFM). Both methods were found complementary in combining rapid aquisition of images at different places on the samples with high-resolution, undistorted imaging, respectively. On not misoriented substrates, both REM and AFM revealed a similar decrease of the densities of monolayer steps, islands and holes with increasing temperature. However, the detection probability of small monolayer islands and holes with sizes below 5 nm in AFM, and below 10 nm in REM, seems to be limited by a thin oxide layer. In REM, the lateral resolution in imaging direction is further reduced to about 100 nm by the strongly foreshortening perspective. On rough surfaces, the resolution in AFM is strongly reduced, such that step bunches on misoriented substrates could not be resolved into single steps with distance of below 20 nm. This, however, was clearly possible in REM, when the bunches were oriented about parallel to the viewing direction. On the other hand, virtually undistorted imaging in AFM allowed to detect anisotropic shapes of islands and holes, which developed during annealing.