Mating Response Research Articles

The G Protein Gamma Subunit, Ste18, is a Phosphorylation‐Dependent pH Sensor that Controls MAPK Activation in Yeast

As essential transducers of extracellular stimuli such as hormones and neurotransmitters, G protein signaling (GPS) systems – comprised of seven transmembrane receptors (GPCRs), heterotrimeric G‐proteins (Gαβγ), and regulators of G‐protein signaling (RGS) proteins – are important regulators of cell/environment homeostasis in all eukaryotes. Yeast harbor a single canonical GPS system that regulates a pheromone‐dependent mating response, which has long served as a tool for discovering regulators fundamental for all eukaryotic GPS systems. In wild type yeast, the activation rate and amplitude of pheromone signaling is severely dampened by negative feedback phosphorylation of the canonical Gγ subunit, Ste18, and the MAPK scaffold, Ste5. Here, we show that Ste18 is a pH sensor that undergoes combinatorial phosphorylation/dephosphorylation in response to fluctuations in intracellular pH (pHi). Using a site‐specific phosphorylation‐dependent electrophoretic mobility assay and a pHi probe (pHlourin), we show that Ste18S3 is rapidly phosphorylated in response to intracellular acidification, while Ste18S7 is rapidly phosphorylated in response to mating pheromone. When pHi is lowered, basal phosphorylation on Ste18S7 decreases concomitantly with increasing phosphorylation on Ste18S3. In contrast, pheromone stimulation activates phosphorylation on Ste18S7, but not Ste18S3. We show that phosphomimic mutations on either phosphosite function to prohibit phosphorylation of the other non‐mutated site, demonstrating that phosphorylation is mutually exclusive. Furthermore, phosphorylation at either site, mimicked by glutamate mutations, is sufficient to inhibit ultra‐fast and intense output from the pheromone pathway. Thus, our findings suggest that Ste18Nt acts as a phosphorylation‐dependent pH‐sensor that is capable of restricting pheromone pathway output under acid stress conditions when yeast mating is sub‐optimal. Considering that dysregulation of pHi is linked to chronic and life‐threatening diseases such as cancer, stroke, and Alzheimer's disease, our data reveal the possibility that Gγ subunits serve as pH sensors important for regulating G protein signaling in such diseases.Support or Funding InformationNational Institutes of Health (NIH)This abstract is from the Experimental Biology 2018 Meeting. There is no full text article associated with this abstract published in The FASEB Journal.

Coordinate regulation of Ustilago maydis ammonium transporters and genes involved in mating and pathogenicity

The dimorphic switch from budding to filamentous growth is an essential morphogenetic transition many fungi utilize to cause disease in the host. Although different environmental signals can induce filamentous growth, the developmental programs associated with transmitting these different signals may differ. Here, we explore the relationship between filamentation and expression levels of ammonium transporters (AMTs) that also sense low ammonium for Ustilago maydis, the pathogen of maize. Overexpression of the high affinity ammonium transporter, Ump2, under normally non-inducing conditions, results in filamentous growth. Furthermore, ump2 expression levels are correlated with expression of genes involved in the mating response pathway and in pathogenicity. Ump1 and Ump2 transcription levels also tracked expression of genes normally up-regulated during either filamentous growth or during growth of the fungus inside the host. Interestingly, haploid strains deleted for the b mating-type locus, like those deleted for ump2, failed to filament on low ammonium; they also shared some alterations in gene expression patterns with cells deleted for ump2 or over-expressing this gene. Deletion of ump2 either in both mating partners or in a solopathogenic haploid strain resulted in a dramatic reduction in disease severity for infected plants, suggesting some importance of this transceptor in the pathogenesis program.

The Ras1-Cdc42 pathway is involved in hyphal development of Schizosaccharomyces japonicus.

Dimorphic yeasts transform into filamentous cells or hyphae in response to environmental cues. The mechanisms for the hyphal transition of dimorphic yeasts have mainly been studied in Candida albicans, an opportunistic human fungal pathogen. The Ras1-MAPK pathway is a major signal transduction pathway for hyphal transition in C. albicans. Recently, the non-pathogenic dimorphic yeast Schizosaccharomyces japonicus has also been used for genetic analyses of hyphal induction. We confirmed that Ras1-MAPK and other MAPK pathways exist in Sz. japonicus. To examine how hyphal transition is induced by environmental stress-triggered signal transduction, we studied the hyphal transition of deletion mutants of MAPK pathways in Sz. japonicus. We found that the MAPK pathways are not involved in hyphal induction, although the mating response is dependent on these pathways. However, only Ras1 deletion caused a severe defect in hyphal development via both DNA damage and environmental stressors. In fact, genes on the Cdc42 branch of the Ras1 (Ras1-Cdc42) pathway, efc25Sj, scd1Sj and scd2Sj, are required for hyphal development. Cell morphology analysis indicated that the apical growth of hyphal cells was inhibited in Ras1-Cdc42-pathway deletion mutants. Thus, the control of cell polarity by the Ras1-Cdc42 pathway is crucial for hyphal development.

The Habenula's Role in Adaptive Behaviors: Contributions From Neuroimaging.

The Habenula's Role in Adaptive Behaviors: Contributions From Neuroimaging.

93 Oestrous Synchronisation Studies in a Marsupial

There is no strategy to precisely synchronise and predict oestrus and ovulation in marsupials. This is the major limitation in applying assisted reproduction to marsupial conservation. Routine methods of female synchronization that target the ovary (effective in eutherians) are ineffective in marsupials because they do not disrupt the corpus luteum. Gondaotropin-releasing hormone (GnRH) agonists have been used to suppress female cycling in several marsupials and work by targeting GnRH action in the pituitary. After the GnRH agonist reaches its active endpoint, female cycling returns. This study investigated whether Lucrin Depot (Abbott Laboratories, Lake Bluff, IL, USA), a tailored 1-month microsphere GnRH agonist preparation, has the potential to first suppress female cycling, and then facilitate a synchronous return to female cycling in a model marsupial, the tammar wallaby (Macropus eugenii). Preliminary studies indicated that Lucrin could be used to regulate ovarian activity, but a dose >0.20 mg kg−1 was required. In this study, nonpregnant tammars (n = 18, 6 per group) had their pouch young removed (RPY) on Day 0; RPY suspends lactation and reactivates cycling, allowing for controlled assessment of oestrus and mating in treated and untreated females. On Day 0, an intramuscular (IM) injection of water (Control) or 1 mg kg−1 of Lucrin Depot (group A) was given after RPY. Group B also received 1 mg kg−1 of Lucrin Depot but this was not injected until Day 10 after RPY (a strategy to assess whether timing of Lucrin yields different results). Females were placed in breeding pens of 1 male to 3 females. Reproductive suppression and synchrony of return to female cycling was assessed by pouch and urogenital opening checks to detect newborn young and copulatory plugs. All data (time of mating/conception) were analysed using ANOVA (significance, P < 0.05). There was a significant difference between the first mating response in the Control compared with Groups A and B (P = 0.0003), but the time from Lucrin injection to mating, Day 0 or Day 10, was not significant (P = 0.1431). All control females mated before Day 32 RPY, whereas all Lucrin-treated females mated from Day 33 to 66. All Lucrin-treated females conceived as evidenced by pouch young. Further analysis revealed 2 Lucrin-injection to mating response intervals, those females delayed by ~10 days that conceived between 33 and 50 days (n = 7: 41 ± 2.1 days; mean ± SEM), and those females delayed by ~30 days that conceived between 61 and 66 days (n = 5: 62 ± 1.0 days; mean ± SEM) following injection. Thus, an IM injection of 1 mg kg−1 of Lucrin Depot is sufficient to delay oestrus in breeding tammar wallabies whether given at the time of RPY or 10 days later. This study confirmed that Lucrin Depot can be used to regulate ovarian activity in macropod marsupials, and has potential to form the basis of a GnRH agonist-based synchronisation strategy for use in assisted breeding for marsupial conservation. This research was supported by Holsworth Wildlife Research Endowment.

Mitogen-activated protein kinase (MAPK) dynamics determine cell fate in the yeast mating response

In the yeast Saccharomyces cerevisiae, the exposure to mating pheromone activates a prototypic mitogen-activated protein kinase (MAPK) cascade and triggers a dose-dependent differentiation response. Whereas a high pheromone dose induces growth arrest and formation of a shmoo-like morphology in yeast cells, lower pheromone doses elicit elongated cell growth. Previous population-level analysis has revealed that the MAPK Fus3 plays an important role in mediating this differentiation switch. To further investigate how Fus3 controls the fate decision process at the single-cell level, we developed a specific translocation-based reporter for monitoring Fus3 activity in individual live cells. Using this reporter, we observed strikingly different dynamic patterns of Fus3 activation in single cells differentiated into distinct fates. Cells committed to growth arrest and shmoo formation exhibited sustained Fus3 activation. In contrast, most cells undergoing elongated growth showed either a delayed gradual increase or pulsatile dynamics of Fus3 activity. Furthermore, we found that chemically perturbing Fus3 dynamics with a specific inhibitor could effectively redirect the mating differentiation, confirming the causative role of Fus3 dynamics in driving cell fate decisions. MAPKs mediate proliferation and differentiation signals in mammals and are therapeutic targets in many cancers. Our results highlight the importance of MAPK dynamics in regulating single-cell responses and open up the possibility that MAPK signaling dynamics could be a pharmacological target in therapeutic interventions.

Streptococcus gordonii pheromone s.g.cAM373 may influence the reservoir of antibiotic resistance determinants of Enterococcus faecalis origin in the oral metagenome.

Streptococcus gordonii produces a pheromone heptapeptide, s.g.cAM373, which induces a conjugative mating response in Enterococcus faecalis cells carrying the responsive plasmid, pAM373. We investigated the extent of this intergeneric signaling on DNA acquisition by streptococcal species likely to cohabit oral biofilms. E. faecalis/pAM373/pAMS470 cells were incubated with synthetic s.g.cAM373, reverse peptide s.g.cAM373-R, or peptide-free medium and examined for their abilities to transfer plasmid DNA to streptococcal species in the presence of DNase. Preinduction of E. faecalis donors with s.g.cAM373 resulted in transconjugation frequencies in non-pheromone producing strains of Streptococcus mutans, Streptococcus sanguinis, Streptococcus anginosus, and Streptococcus suis that were significantly higher than frequencies when donors were preincubated with s.g.cAM373-R or medium alone. Peptide-mediated communication between commensal streptococci and E. faecalis carrying pheromone-responsive plasmids may facilitate conjugative DNA transfer to bystander species, and influence the reservoir of antibiotic resistance determinants of enterococcal origin in the oral metagenome.

Glucosamine stimulates pheromone-independent dimorphic transition in Cryptococcus neoformans by promoting Crz1 nuclear translocation.

Morphotype switch is a cellular response to external and internal cues. The Cryptococcus neoformans species complex can undergo morphological transitions between the yeast and the hypha form, and such morphological changes profoundly affect cryptococcal interaction with various hosts. Filamentation in Cryptococcus was historically considered a mating response towards pheromone. Recent studies indicate the existence of pheromone-independent signaling pathways but their identity or the effectors remain unknown. Here, we demonstrated that glucosamine stimulated the C. neoformans species complex to undergo self-filamentation. Glucosamine-stimulated filamentation was independent of the key components of the pheromone pathway, which is distinct from pheromone-elicited filamentation. Glucosamine stimulated self-filamentation in H99, a highly virulent serotype A clinical isolate and a widely used reference strain. Through a genetic screen of the deletion sets made in the H99 background, we found that Crz1, a transcription factor downstream of calcineurin, was essential for glucosamine-stimulated filamentation despite its dispensability for pheromone-mediated filamentation. Glucosamine promoted Crz1 translocation from the cytoplasm to the nucleus. Interestingly, multiple components of the high osmolality glycerol response (HOG) pathway, consisting of the phosphorelay system and some of the Hog1 MAPK module, acted as repressors of glucosamine-elicited filamentation through their calcineurin-opposing effect on Crz1’s nuclear translocation. Surprisingly, glucosamine-stimulated filamentation did not require Hog1 itself and was distinct from the conventional general stress response. The results demonstrate that Cryptococcus can resort to multiple genetic pathways for morphological transition in response to different stimuli. Given that the filamentous form attenuates cryptococcal virulence and is immune-stimulatory in mammalian models, the findings suggest that morphogenesis is a fertile ground for future investigation into novel means to compromise cryptococcal pathogenesis.

Reconstructing the regulatory circuit of cell fate determination in yeast mating response.

Massive technological advances enabled high-throughput measurements of proteomic changes in biological processes. However, retrieving biological insights from large-scale protein dynamics data remains a challenging task. Here we used the mating differentiation in yeast Saccharomyces cerevisiae as a model and developed integrated experimental and computational approaches to analyze the proteomic dynamics during the process of cell fate determination. When exposed to a high dose of mating pheromone, the yeast cell undergoes growth arrest and forms a shmoo-like morphology; however, at intermediate doses, chemotropic elongated growth is initialized. To understand the gene regulatory networks that control this differentiation switch, we employed a high-throughput microfluidic imaging system that allows real-time and simultaneous measurements of cell growth and protein expression. Using kinetic modeling of protein dynamics, we classified the stimulus-dependent changes in protein abundance into two sources: global changes due to physiological alterations and gene-specific changes. A quantitative framework was proposed to decouple gene-specific regulatory modes from the growth-dependent global modulation of protein abundance. Based on the temporal patterns of gene-specific regulation, we established the network architectures underlying distinct cell fates using a reverse engineering method and uncovered the dose-dependent rewiring of gene regulatory network during mating differentiation. Furthermore, our results suggested a potential crosstalk between the pheromone response pathway and the target of rapamycin (TOR)-regulated ribosomal biogenesis pathway, which might underlie a cell differentiation switch in yeast mating response. In summary, our modeling approach addresses the distinct impacts of the global and gene-specific regulation on the control of protein dynamics and provides new insights into the mechanisms of cell fate determination. We anticipate that our integrated experimental and modeling strategies could be widely applicable to other biological systems.

Sex specific molecular responses of quick-to-court protein in Indian malarial vector Anopheles culicifacies: conflict of mating versus blood feeding behaviour.

Understanding the molecular basis of mosquito behavioural complexity plays a central role in designing novel molecular tools to fight against their vector-borne diseases. Although the olfactory system plays an important role in guiding and managing many behavioural responses including feeding and mating, but the sex-specific regulation of olfactory responses remain poorly investigated. From our ongoing transcriptomic data annotation of olfactory tissue of blood fed adult female An. culicifacies mosquitoes; we have identified a 383 bp long unique transcript encoding a Drosophila homolog of the quick-to-court protein. Previously this was shown to regulate courtship behaviour in adult male Drosophila. A comprehensive in silico analysis of the quick-to-court (qtc) gene of An. culicifacies (Ac-qtc) predicts a 1536 bp single copy gene encoding 511 amino acid protein, having a high degree of conservation with other insect homologs. The age-dependent increased expression of putative Ac-qtc correlated with the maturation of the olfactory system, necessary to meet the sex-specific conflicting demand of mating (mate finding) versus host-seeking behavioural responses. Sixteen to eighteen hours of starvation did not alter Ac-qtc expression in both sexes, however, blood feeding significantly modulated its response in the adult female mosquitoes, confirming that it may not be involved in sugar feeding associated behavioural regulation. Finally, a dual behavioural and molecular assay indicated that natural dysregulation of Ac-qtc in the late evening might promote the mating events for successful insemination. We hypothesize that Ac-qtc may play a unique role to regulate the sex-specific conflicting demand of mosquito courtship behaviour versus blood feeding behaviour in the adult female mosquitoes. Further elucidation of this molecular mechanism may provide further information to evaluate Ac-qtc as a key molecular target for mosquito-borne disease management.

Identification of Binding Sites for Small Molecule Modulators of Gβγ Signaling

G‐protein coupled receptors (GPCRs) transduce extracellular stimuli to intracellular signaling events via G‐proteins and β‐arrestins and are targeted by up to 40% of FDA approved drugs. Targeting proteins downstream of the GPCR, such as G‐protein β, allows for selective modulation of specific pathways downstream of GPCRs. Inhibition of interactions between Gβγ and specific effectors has shown to have therapeutic potential in diseases such as heart failure and inflammation (Lehmann et al., 2008. and Casey et al., 2010.)Previously, our laboratory identified small molecules that bind to a common site for protein‐protein interactions on Gβ. These compounds selectively modulate Gβγ‐dependent activity of various downstream effectors. We hypothesize that these compounds differentially modulate Gβγ‐mediated signals due to binding to specific subsets of amino acids on Gβ. To find the binding site for these compounds, we used a random mutagenesis screen in yeast. The yeast mating response to α‐factor is mediated by the Gβγ homolog, Ste4p. This pathway when activated can inhibit yeast growth making it an attractive tool for examining the inhibition of βγ and homologs using small molecules.Gallein, a well‐characterized Gβγ inhibitor, inhibited the α‐factor/Ste4P mediated mating response pathway and it suppressed α‐factor induced growth arrest. To screen for residues on Ste4p that bind gallein, we set up a yeast strain where α‐factor stimulates growth on media lacking histidine and showed that gallein inhibits growth of this strain in the presence of α‐factor. We randomly mutagenized ste4p and 500,000 variants were screened for colonies that grew in the presence of gallein. Two classes of mutations were found. Class I mutants had high basal activity suggesting that the mutations decreased the affinity of Ste4P for Gpa1p. Indeed, these mutations were located at positions known to be important for mammalian Gα binding to Gβγ. Class II mutants did not exhibit high basal activity. To test whether these mutants were resistant to gallein inhibition because they lack a gallein binding site, we examined the concentration dependence for gallein inhibition in a reporter assay. The IC50's for the Class I mutants were not different from wild‐type suggesting that resistance was not conferred by a loss of gallein binding. We are in the course of examining class II mutants. One double mutant, G182R, C282E, showed an increased IC50 for gallein while other remain to be examined. All of these mutations map to a region on a critical Gβγ protein‐protein interaction surface.Finding gallein binding specific residues will allow us to define an inhibitor binding site on Gβ, and may allow for rational design of novel therapeutic inhibitors. In addition, it will help us understand the mechanism for selective inhibition of signaling downstream of Gβγ by small molecules.

Characterizing the Role of Yeast Cyclin Pcl1 in the Establishment of Pheromone Receptor Polarity

Chemotaxis (directed cell movement) and chemotropism (directed cell growth) are vital mechanisms essential to a variety of biological processes, including cell development, cancer metastasis, angiogenesis, and axon guidance. Both chemotaxis and chemotropism depend on the ability of the cell to interpret shallow and complex chemical gradients. One of the best‐studied models of eukaryotic directional sensing is the mating response of Saccharomyces cerevisiae (budding yeast). Yeast exist as two haploid mating types, MATa and MATα, that can sense pheromone gradients, chemotrop toward the closest mating partner, and eventually fuse at their tips to form diploid cells. In vegetative cells, the G protein coupled receptor (GPCR) that binds pheromone and its associated heterotrimeric G protein are uniformly distributed on the plasma membrane. Upon receptor activation, Gβγ is released from Gα and Gβ is rapidly phosphorylated on multiple residues. Free Gβγ signals through a MAP kinase cascade to trigger cell‐cycle arrest and changes in gene expression. Pheromone‐activated receptors are globally internalized and then reappear as polarized crescents that mark the chemotropic growth site, where the cell ultimately forms its mating projection. Previous studies have shown that the receptor crescents are visible before detectable actin polarization and that the receptors can polarize without actin‐dependent directed secretion [1]. On the contrary, inhibiting receptor internalization confers a moderate defect in gradient sensing [2]. A key question raised by these observations is how does the yeast cell interpret the external signals and establish the chemotropic growth site? From a directed genetic screen, we found that Pcl1 is critical for the establishment of receptor polarity. Pcl1 is a cyclin required by the cyclin dependent kinase Pho85, which has been implicated in polarization during budding. It is known that Gβ phosphorylation is crucial to receptor polarization, and Gβ is predicted to be a substrate of Pho85‐Pcl1 [3]. Additionally, our data indicated a genetic interaction between Gβ and Pcl1. Here, we show that Pcl1 localizes to the mating projection during the mating response. Moreover, Pcl1 and Gβ interacted directly on the plasma membrane of pheromone‐treated cells, as indicated by a Bimolecular fluorescence complementation assay. Lastly, Pho85 inactivation also appears to affect receptor polarity. Taken together, these results suggest that Pho85‐Pcl1 regulates polarization of the receptor by phosphorylating Gβ.Support or Funding InformationNational Science Foundation

The Yeast Claudin Dcv1 Is Essential for the Maintenance of Distinct Membrane Domains and Polarized Mating Functions

Chemotropic and chemotactic cells exhibit a remarkable ability to interpret chemical gradients and sense direction. The mating response of the budding yeast S. cerevisiae is a model chemotropic system. The two haploid mating types, MATa and MATα, sense the pheromone secreted by cells of the opposite type, polarize their growth to form a mating projection towards the closest mating partner, and fuse to form diploids. In MATa cells, the Ste2 pheromone receptor is the primary gradient sensor. Ste2 is uniformly distributed on the plasma membrane (PM) in vegetative cells, but upon ligand binding, it is rapidly internalized. It then reappears as a polarized crescent that coincides with the incipient mating projection site. In mating mixtures, the newly emerged receptor crescents orient towards the closest mating partner. Although actin‐dependent directed secretion stabilizes and amplifies receptor polarity, we have shown that receptor polarization precedes the polarization of actin cables and occurs in the absence of actin‐directed secretion. In contrast, internalization of the receptor is essential for its polarization. How is receptor polarity established upstream of actin‐directed secretion and what are the key players?In a directed genetic screen, we found that deletion of the yeast claudin homolog, DCV1, conferred a significant defect in receptor polarization without affecting actin‐directed secretion. Unlike wild type (WT) cells, dcv1Δ cells were unable to establish a receptor polarization site that could be amplified independently of f‐actin. Based on its primary structure, Dcv1 was predicted to be an integral membrane protein. Immuno‐fluorescence (IF) microscopy in cells expressing Dcv1‐HA suggested that the protein localizes uniformly to the PM in vegetative cells and away from the mating projection in pheromone‐treated cells. Studies of cells expressing fluorescently‐tagged Dcv1 confirmed the IF results. Furthermore, Dcv1 appeared to localize as a ring at the base of newly formed mating projections. Cells co‐expressing fluorescently‐tagged forms of Dcv1 and the receptor exhibited inverse localization of these proteins concurrent with morphogenesis. This result is consistent with the observation that claudins promote the formation of membrane domains and act as membrane barriers. dcv1Δ cells also exhibited abnormal localization of various lipids in the PM. These include phosphotidylinositol, phosphotidylserine, and sterols. Preliminary lipidomic studies using mass spectrometry suggest differences in the phospholipid composition of the PM in WT and dcv1Δ cells. Consistent with its effect on receptor polarization, dcv1Δ conferred a defect in pheromone‐gradient sensing. Time‐lapse imaging of mating mixtures also revealed that Dcv1 is required for a variety of polarized mating functions in addition to receptor redistribution, and for efficient mating. In summary, our data implicate a gene of previously unknown function in the polarization of proteins and plasma membrane lipids that contribute to efficient chemotropism and mating. We propose that the yeast claudin Dcv1 plays a role in organizing mating‐specific membrane domains essential for the polarization of the receptor and other mating‐specific proteins.Support or Funding InformationNational Science Foundation

Nuclear relocation of Kss1 contributes to the specificity of the mating response

Mitogen Activated Protein Kinases (MAPK) play a central role in transducing extra-cellular signals into defined biological responses. These enzymes, conserved in all eukaryotes, exert their function via the phosphorylation of numerous substrates located throughout the cell and by inducing a complex transcriptional program. The partitioning of their activity between the cytoplasm and the nucleus is thus central to their function. Budding yeast serves as a powerful system to understand the regulation of these fundamental biological phenomena. Under vegetative growth, the MAPK Kss1 is enriched in the nucleus of the cells. Stimulation with mating pheromone results in a rapid relocation of the protein in the cytoplasm. Activity of either Fus3 or Kss1 in the mating pathway is sufficient to drive this change in location by disassembling the complex formed between Kss1, Ste12 and Dig1. Artificial enrichment of the MAPK Kss1 in the nucleus in presence of mating pheromone alters the transcriptional response of the cells and induces a cell-cycle arrest in absence of Fus3 and Far1.

Testing the limits of gradient sensing.

The ability to detect a chemical gradient is fundamental to many cellular processes. In multicellular organisms gradient sensing plays an important role in many physiological processes such as wound healing and development. Unicellular organisms use gradient sensing to move (chemotaxis) or grow (chemotropism) towards a favorable environment. Some cells are capable of detecting extremely shallow gradients, even in the presence of significant molecular-level noise. For example, yeast have been reported to detect pheromone gradients as shallow as 0.1 nM/μm. Noise reduction mechanisms, such as time-averaging and the internalization of pheromone molecules, have been proposed to explain how yeast cells filter fluctuations and detect shallow gradients. Here, we use a Particle-Based Reaction-Diffusion model of ligand-receptor dynamics to test the effectiveness of these mechanisms and to determine the limits of gradient sensing. In particular, we develop novel simulation methods for establishing chemical gradients that not only allow us to study gradient sensing under steady-state conditions, but also take into account transient effects as the gradient forms. Based on reported measurements of reaction rates, our results indicate neither time-averaging nor receptor endocytosis significantly improves the cell’s accuracy in detecting gradients over time scales associated with the initiation of polarized growth. Additionally, our results demonstrate the physical barrier of the cell membrane sharpens chemical gradients across the cell. While our studies are motivated by the mating response of yeast, we believe our results and simulation methods will find applications in many different contexts.

Single-cell dynamics and variability of MAPK activity in a yeast differentiation pathway

In response to pheromones, yeast cells activate a MAPK pathway to direct processes important for mating, including gene induction, cell-cycle arrest, and polarized cell growth. Although a variety of assays have been able to elucidate signaling activities at multiple steps in the pathway, measurements of MAPK activity during the pheromone response have remained elusive, and our understanding of single-cell signaling behavior is incomplete. Using a yeast-optimized FRET-based mammalian Erk-activity reporter to monitor Fus3 and Kss1 activity in live yeast cells, we demonstrate that overall mating MAPK activity exhibits distinct temporal dynamics, rapid reversibility, and a graded dose dependence around the KD of the receptor, where phenotypic transitions occur. The complex dose response was found to be largely a consequence of two feedbacks involving cyclin-mediated scaffold phosphorylation and Fus3 autoregulation. Distinct cell cycle-dependent response patterns comprised a large portion of the cell-to-cell variability at each dose, constituting the major source of extrinsic noise in coupling activity to downstream gene-expression responses. Additionally, we found diverse spatial MAPK activity patterns to emerge over time in cells undergoing default, gradient, and true mating responses. Furthermore, ramping up and rapid loss of activity were closely associated with zygote formation in mating-cell pairs, supporting a role for elevated MAPK activity in successful cell fusion and morphogenic reorganization. Altogether, these findings present a detailed view of spatiotemporal MAPK activity during the pheromone response, elucidating its role in mediating complex long-term developmental fates in a unicellular differentiation system.

Sensory input attenuation allows predictive sexual response in yeast.

Animals are known to adjust their sexual behaviour depending on mate competition. Here we report similar regulation for mating behaviour in a sexual unicellular eukaryote, the budding yeast Saccharomyces cerevisiae. We demonstrate that pheromone-based communication between the two mating types, coupled to input attenuation by recipient cells, enables yeast to robustly monitor relative mate abundance (sex ratio) within a mixed population and to adjust their commitment to sexual reproduction in proportion to their estimated chances of successful mating. The mechanism of sex-ratio sensing relies on the diffusible peptidase Bar1, which is known to degrade the pheromone signal produced by mating partners. We further show that such a response to sexual competition within a population can optimize the fitness trade-off between the costs and benefits of mating response induction. Our study thus provides an adaptive explanation for the known molecular mechanism of pheromone degradation in yeast.

The conserved dual phosphorylation sites of the Candida albicans Hog1 protein are crucial for white-opaque switching, mating, and pheromone-stimulated cell adhesion.

Candida albicans is an opportunistic human pathogen capable of causing life-threatening infections in immunocompromised patients. C. albicans has a unique morphological transition between white and opaque phases. These two cells differ in virulence, mating capability, biofilm formation, and host-cell interaction. Previous studies revealed that deletion of the SSK2, PBS2, or HOG1 gene resulted in 100% opaque cell formation and suppressed the mating response. Thr-174 and Tyr-176 of the Hog1 protein are important phosphoacceptors and can be activated in response to stimuli. In this study, we first demonstrated the importance of two conserved phosphorylation sites in white-opaque switching, mating, and pheromone-stimulated cell adhesion. Six Hog1 point-mutated strains were generated, including nonphosphorylated strains (Hog1(T174A), Hog1(Y176F), and Hog1(T174A,Y176F)) and negatively charged phosphorylated strains (Hog1(T174D), Hog1(Y176D), and Hog1(T174D,Y176D)). Point mutation on Thr-174, Tyr-176 or in combination with the Hog1 protein in C. albicans MTL homozygous strains stimulated opaque cell formation at a frequency of 100%. Furthermore, mating projections of point-mutated strains were significantly shorter and their mating efficiencies and pheromone-stimulated cell adhesive numbers were lower than those of the wild-type. By investigating the effects of Hog1 phosphorylation in ssk1Δ and sln1Δ, we also demonstrate that the phosphorylation intensity of Hog1p is directly involved in the white-opaque switching. Taken together, the results of our study demonstrate that dual phosphorylation sites of C. albicans are crucial for white-opaque transition, sexual mating, and pheromone-induced cell adhesion.

Gβ promotes pheromone receptor polarization and yeast chemotropism by inhibiting receptor phosphorylation.

Gradient-directed cell migration (chemotaxis) and growth (chemotropism) are processes that are essential to the development and life cycles of all species. Cells use surface receptors to sense the shallow chemical gradients that elicit chemotaxis and chemotropism. Slight asymmetries in receptor activation are amplified by downstream signaling systems, which ultimately induce dynamic reorganization of the cytoskeleton. During the mating response of budding yeast, a model chemotropic system, the pheromone receptors on the plasma membrane polarize to the side of the cell closest to the stimulus. Although receptor polarization occurs before and independently of actin cable-dependent delivery of vesicles to the plasma membrane (directed secretion), it requires receptor internalization. Phosphorylation of pheromone receptors by yeast casein kinase 1 or 2 (Yck1/2) stimulates their internalization. We showed that the pheromone-responsive Gβγ dimer promotes the polarization of the pheromone receptor by interacting with Yck1/2 and locally inhibiting receptor phosphorylation. We also found that receptor phosphorylation is essential for chemotropism, independently of its role in inducing receptor internalization. A mathematical model supports the idea that the interaction between Gβγ and Yck1/2 results in differential phosphorylation and internalization of the pheromone receptor and accounts for its polarization before the initiation of directed secretion.

Microarray Analysis of Gene Expression in Saccharomyces cerevisiae kap108Δ Mutants upon Addition of Oxidative Stress.

Protein transport between the nucleus and cytoplasm of eukaryotic cells is tightly regulated, providing a mechanism for controlling intracellular localization of proteins, and regulating gene expression. In this study, we have investigated the importance of nucleocytoplasmic transport mediated by the karyopherin Kap108 in regulating cellular responses to oxidative stress in Saccharomyces cerevisiae. We carried out microarray analyses on wild-type and kap108 mutant cells grown under normal conditions, shortly after introduction of oxidative stress, after 1 hr of oxidative stress, and 1 hr after oxidative stress was removed. We observe more than 500 genes that undergo a 40% or greater change in differential expression between wild-type and kap108Δ cells under at least one of these conditions. Genes undergoing changes in expression can be categorized in two general groups: 1) those that are differentially expressed between wild-type and kap108Δ cells, no matter the oxidative stress conditions; and 2) those that have patterns of response dependent upon both the absence of Kap108, and introduction or removal of oxidative stress. Gene ontology analysis reveals that, among the genes whose expression is reduced in the absence of Kap108 are those involved in stress response and intracellular transport, while those overexpressed are largely involved in mating and pheromone response. We also identified 25 clusters of genes that undergo similar patterns of change in gene expression when oxidative stresses are added and subsequently removed, including genes involved in stress response, oxidation–reduction processing, iron homeostasis, ascospore wall assembly, transmembrane transport, and cell fusion during mating. These data suggest that Kap108 is important for regulating expression of genes involved in a variety of specific cell functions.