Marked Pattern Research Articles

Cholinergic modulation of upper airway control: maturational changes and mechanisms at cellular and synaptic levels.

Respiration is governed by a central rhythm and pattern generator, which has the preBötzinger complex as the inspiratory oscillator initiating the coordinated activity of several respiratory muscles, including the diaphragm, intercostals, and upper airway muscles. The diaphragm is the main inspiratory pump muscle driving inflow, while dilator upper airway muscles, such as tongue muscles, reduce airway resistance during inspiration. Breathing exhibits a marked state-dependent pattern attributed to changes in neuromodulatory tone in respiratory-related brain regions, including decreases in noradrenaline and serotonin and increases in acetylcholine levels during rapid eye movement (REM) sleep. Here, we discuss respiratory modulation by acetylcholine acting on its metabotropic muscarinic receptors, focusing on the regulation of upper airway muscle activity during sleep and wakefulness and its changing effects with postnatal maturation. We focus on experimental data examining muscarinic receptor distribution patterns, the ion channels they modulate, and how these distribution patterns change with postnatal maturation. We also consider experimental data highlighting cholinergic cellular and synaptic effects on hypoglossal motoneurons and preBötzinger Complex neurons, and how that might explain changes in the effects of cholinergic modulation with development. Overall, this discussion is critical to comprehend the postnatal maturation in the cholinergic modulation of the respiratory control system leading to opposing effects of muscarinic receptors on upper airway muscle activity in neonate (excitatory) and adult (inhibitory) preparations. The changes in cholinergic pathways associated with dysfunctional upper airway patency control will also be discussed in the context of pathologies, such as sleep-disordered breathing.

Investigating unilateral and bilateral motor imagery control using electrocorticography and fMRI in awake craniotomy

BackgroundThe rapid development of neurosurgical techniques, such as awake craniotomy, has increased opportunities to explore the mysteries of the brain. This is crucial for deepening our understanding of motor control and imagination processes, especially in developing brain–computer interface (BCI) technologies and improving neurorehabilitation strategies for neurological disorders. ObjectiveThis study aimed to analyze brain activity patterns in patients undergoing awake craniotomy during actual movements and motor imagery, mainly focusing on the motor control processes of the bilateral limbs. MethodsWe conducted detailed observations of patients undergoing awake craniotomies. The experimenter requested participants to perform and imagine a series of motor tasks involving their hands and tongues. Brain activity during these tasks was recorded using functional magnetic resonance imaging (fMRI) and intraoperative electrocorticography (ECoG). The study included left and right finger tapping, tongue protrusion, hand clenching, and imagined movements corresponding to these actions. ResultsfMRI revealed significant activation in the brain's motor areas during task performance, mainly involving bilateral brain regions during imagined movement. ECoG data demonstrated a marked desynchronization pattern in the ipsilateral motor cortex during bilateral motor imagination, especially in bilateral coordination tasks. This finding suggests a potential controlling role of the unilateral cerebral cortex in bilateral motor imagination. ConclusionOur study highlights the unilateral cerebral cortex's significance in controlling bilateral limb motor imagination, offering new insights into future brain network remodeling in patients with hemiplegia. Additionally, these findings provide important insights into understanding motor imagination and its impact on BCI and neurorehabilitation.

Mapping membrane biophysical nano-environments

The mammalian plasma membrane is known to contain domains with varying lipid composition and biophysical properties. However, studying these membrane lipid domains presents challenges due to their predicted morphological similarity to the bulk membrane and their scale being below the classical resolution limit of optical microscopy. To address this, we combine the solvatochromic probe di-4-ANEPPDHQ, which reports on its biophysical environment through changes in its fluorescence emission, with spectrally resolved single-molecule localisation microscopy. The resulting data comprises nanometre-precision localisation coordinates and a generalised polarisation value related to the probe’s environment – a marked point pattern. We introduce quantification algorithms based on topological data analysis (PLASMA) to detect and map nano-domains in this marked data, demonstrating their effectiveness in both artificial membranes and live cells. By leveraging environmentally sensitive fluorophores, multi-modal single molecule localisation microscopy, and advanced analysis methods, we achieve nanometre scale mapping of membrane properties and assess changes in response to external perturbation with methyl-β-cyclodextrin. This integrated methodology represents an integrated toolset for investigating marked point pattern data at nanometre spatial scales.

Island Biogeography Theory and the Island Rule in Orchid Bees in Panama

ABSTRACTAimThe study of the theory of island biogeographic (TIB) has focused mainly on plants and vertebrates, with support for the predictions that species richness decreases with distance from the mainland and increases with island size. However, less work has been done on invertebrates. Similarly, the study of the island rule has been studied mainly in vertebrates. A group of invertebrates that can facilitate the study of TIB and the island rule are orchid bees (Apidae: Euglossini), because they are easily collected and show powerful flight performances that allows them to travel long distances. We wondered if these bees would follow the predictions of island biogeography, given that their populations may not be isolated across islands. To test if there is an homogenitazion of orchid bee communities across islands, we evaluated orchid bees abundance and species composition across islands. Besides, we tested the island rule by examining body size variations in individuals collected across islands.LocationCoiba National Park (Panama).Time PeriodMay and June 2023.TaxaOrchid bees (Hymenoptera: Apidae: Euglossini).MethodsBy using traps with chemical attractants, we sampled male bees from five islands and the mainland in Coiba National Park in the Pacific side of Panama. We tested the TIB by evaluating whether richness decreased with distance from the mainland or whether increased with island area. To investigate the island rule, and whether there is variation in body size across islands, we used Euglossa imperialis and Euglossa mixta as models, the two most abundant species in the study area.ResultsFor the overall orchid bee community, we found that our results fit one of the predictions of IBT, increases in orchid bee abundance with island area; however, species richness did not decrease with isolation and did not increase with island area as predicted by TIB. An interesting result was that as distance from the mainland increased few species became more dominant. Regarding the island rule, we found in the two Euglossa species a marked pattern of reduction in body size as distance from the mainland increased, which seems to outweigh the effect of island size, since the largest island and one of the farthest showed some of the smallest body sizes.Main ConclusionsWhether euglossine bees travel long distances across islands in marine environments remain unclear. As distance from the mainland increases, few species become dominant, which may be caused by a decrease of resources that favours generalist species. This increase in abundance may explain the decrease in body size with isolation, as perhaps competition for resources increases. Our study provides novel insights to better appraise the dynamics of orchid bees' communities in insular habitats.

Entropy‐Based Assessment of Biodiversity, With Application to Ants' Nests Data

ABSTRACTThe present work takes an innovative point of view in the study of a marked point pattern dataset of two ants' species, over an irregular region with a spatial covariate. The approach, based on entropy measures, brings new insights to the interpretation of the behavior of such ants' nesting habits, which can be exploited in the general area of biodiversity evaluation. We make proper use of descriptive entropy measures and inferential approaches, performing a comparative study of their uncertainty and interpretability in the context of biodiversity. For the first time in the study of these ants' nests data, all the available information is fully exploited, and interpretation guidelines are given for assessing both the observed and the latent biodiversity of the system, with a simultaneous consideration of spatial structures, covariate and interpoint interaction effects. Computations are supported by the new release of our R package SpatEntropy.

Perception of fatphobia and pesocentrism within medical consultation

Abstract Background About 42% of adults living with overweight or obesity suffer a marked pattern of stigmatization and thanks to this discrimination the risk of death has increased up to 60%. Objectives To identify the factors that contribute to the perception of fatphobia and pesocentrism within the first level of medical care. Methods A prospective cross-sectional study was carried out. Statistical analysis was performed with X2 test and 95% confidence interval (OR/CI95%). Results 104 participants with obesity and overweight were included. The factors associated with the perception of pesocentrism were, started eating plans before the age of 10 years (3.38/1.12-10.7); being denied consultation for being a fat person (0.27/-0.16-0.46); perceiving mistreatment by the physician regarding weight (0. 2/0.13-0.3); perceiving physical harassment by the physician (0.23/0.16-0.82); perceiving discomfort on physical examination (0.44/0.23-0.82); perceiving fat-phobic behaviors by the physician (5.45/3.24-9.16). Factors associated with perceived fatphobia were, started eating plans before the age of 10 years (4.89/1.71-14.01); being denied consultation for being a fat person (0.19/-0.08-0.44); perceiving mistreatment by the physician regarding weight (0. 07/0.04-0.15); perceiving physical harassment by the physician (0.11/0.06-0.19); perceiving discomfort on physical examination (0.28/0.11-0.67); perceiving weight-centered behaviors by the physician (0.05/0.01-0.23). All with p value <0.05. Conclusions Factors such as the beginning of eating plans in childhood, refusal of consultation for being a fat person, mistreatment regarding weight, physical harassment by the physician, discomfort during physical examination are associated with and favor the perception of both fat-phobia and weight-centeredness in the medical consultation. Key messages • It is of vital importance to know more about the concepts of fatphobia and pesocentrism, in order to promote non-discrimination around them. • Fatphobia and pesocentrism are still little known issues within the medical community, the perception of them is due to discriminatory behaviors that have been normalized.

Parasitic plants show striking convergence in host preference across angiosperm lineages.

The host specificity of a parasite underpins its ecology, distribution, invasive potential and adaptability, yet for most parasitic plants host ranges are poorly understood. We examine host-parasite relationships across lineages to infer how host specificity may have influenced the evolution of parasitism in plants. Host preference data for all plant holoparasite species were manually collected from literature and herbarium specimens, then analysed to investigate and visualise host diversity and specificity. We reveal a disproportionality in host preference across host lineages: the Asteraceae contains 10% of angiosperm diversity but is infected by 31% of parasite species; meanwhile Monocots comprise 23% but are infected by just 3.2%. Furthermore, we observe striking convergence in host preference: Asteraceae, Euphorbiaceae and Fabaceae are infected by six, five and four independent parasite lineages, respectively. We also demonstrate considerable variation in the degree of host specificity among closely related parasite species; a result that does not reflect the expectation of holoparasites - especially endoparasites - as host specialists. The marked pattern of convergence in preference across disparate lineages points to a common pathway in the evolution of parasitism of eudicots in preference to monocots, which may have in turn have been driven by a divergence in host root and vascular architecture. The unexpected variation in host specificity among closely related species suggests that even apparent generalists may comprise cryptic host-specific taxa. This highlights the value of host preference as an additional consideration in parasitic plant taxonomy. Together, our data point to a complex interplay between ecological and physiological factors driving the evolution of host-parasite interactions. Moreover, they emphasize how little is known about the ecology of most holoparasitic plants, a group of organisms that are especially vulnerable at a time of unprecedented biodiversity loss and extinction.

Fluctuation of functional somatic disorders in a population-based cohort. The DanFunD study.

Evidence of incidence of functional somatic disorders (FSD) is hampered by unclear delimitations of the conditions and little is known about the possible interchangeability between syndromes. Further, knowledge on remission and persistence of FSD in the general population is limited. We aimed to assess the natural course of various FSD over 5 years in the general population. A follow-up study (Danish Study of Functional Disorders-DanFunD) was conducted in a random sample of the general population comprising 5,738 participants aged 18-76 years at baseline. Both at baseline and five-year follow-up, participants filled in validated questionnaires on symptoms to delimitate two approaches of FSD, the bodily distress syndrome (BDS) and four functional somatic syndromes (FSS): irritable bowel (IB), chronic fatigue (CF), chronic widespread pain (CWP), and multiple chemical sensitivity (MCS). Both BDS and FSS showed a five-year incidence around 11%. Incidence of the individual FSS varied from 0.8% (MCS) to 5.7% (CF). BDS and FSS showed a remission proportion close to 50%. We found a high degree of interchangeability between each FSS varying from 15.0% to 23.4%. We identified a marked fluctuation pattern of FSD during a five-year period, with a high degree of interchangeability between each FSS. The study stresses the importance of large population-based cohorts with transparent delimitation of FSD in future research to understand these complex conditions.

Seasonal variability of epipelic microphytobenthos community in two subtidal areas of the Northern Adriatic Sea

We investigated the biodiversity and seasonality of subtidal benthic diatoms at two sites of the Northern Adriatic Sea differently affected by anthropogenic inputs. Sediment samples were collected seasonally, and diatom cells were then separated from the sediment using the density gradient centrifugation method. The total abundance of benthic diatoms ranged between 4,409 ± 1,638 and 77,663 ± 30,415 cells cm-2 and the biomass between 0.41 ± 0.22 and 3.66 ± 2.01 μg C cm-2. At both stations, the benthic diatoms showed a marked seasonal pattern, with maximum abundance, biomass and biodiversity in spring and minimum in summer. Motile life forms, such as Navicula, Nitzschia, Fallacia, and Psammodictyon, dominated in terms of abundance at both stations throughout the study period, while plocon (centric diatoms mainly belonging to Biddulphiaceae) increased under mixing conditions, when they represented the largest contributor to biomass. At both stations and in all seasons, the Si:N:P ratio highlighted the strong P limitation, typical of the Adriatic Sea. The ammonium concentration was the highest component of DIN in spring and summer when we observed the highest and lowest MPB abundance respectively. The preference of diatoms for ammonia, coupled with the increased daylight period, may have enhanced the spring growth, whereas in summer the hypoxic conditions may have caused a decrease. Despite the different environmental conditions, the two stations exhibited similar species compositions and seasonal trends, highlighting relative stability against anthropogenic pressures of a different nature.

Radiological Evaluation of Vascular Structures in Cats Infected with Immature Worms of Dirofilaria immitis.

This study aimed to assess thoracic radiographic abnormalities in cats infected with immature stages of Dirofilaria immitis to evaluate the utility of this diagnostic technique during early infection. A total of 123 cats from a hyperendemic area were classified into three groups: asymptomatic cats seronegative to anti-D.-immitis antibodies (Group A), seropositive asymptomatic cats (Group B), and seropositive cats with clinical signs that were at high risk of heartworm-associated respiratory disease (HARD) (Group C). Radiographic measurements and lung parenchymal abnormalities were analyzed and compared across the groups. Significant differences in several parameters, including CrPA/R4, and CdPA/R9 ratios, were observed between healthy and seropositive cats, suggesting early arterial damage even in the absence of adult worms. Other parameters that showed differences between healthy and infected cats were CVC/Ao and CVC/R4 ratios, but not the VHS. Group C exhibited a marked bronchointerstitial pattern, indicating severe parenchymal alterations associated with clinical signs. The study demonstrated that thoracic radiography can detect early vascular and parenchymal changes in feline D. immitis infections, providing valuable information for diagnosing HARD. However, it also highlights the limitations of radiographic techniques, as some seropositive cats displayed no significant abnormalities. The findings underscore the importance of combining radiography with clinical and serological assessments for a more accurate diagnosis of feline heartworm disease.

Marked length pattern rigidity for arithmetic manifolds

Abstract In this paper, we prove a cocycle version of marked length spectrum rigidity. There are two consequences: the first one is marked length pattern rigidity for arithmetic hyperbolic locally symmetric manifolds, and the second one is a strengthened marked length spectrum rigidity for surfaces and closed locally symmetric manifolds.

Does seasonal flowering and fruiting patterns of cacao only depend on climatic factors? The case study of mixed genotype populations in Côte d'Ivoire

Theobroma cacao, a tropical cauliflorous fruit tree, typically produces flowers and fruits twice a year and exhibits alternate harvesting patterns over consecutive six-monthly seasons in regions with bi-modal rainfall distribution, such as Côte d'Ivoire. This study investigated seasonal variations in flowering and fruiting among trees in populations of mixed cacao genotypes. The intensities of crown and trunk flowering and pod production were monitored for eight consecutive six-monthly seasons on 114 adult cacao trees grown from seedlings. We investigated distributions of seasonal flowering and fruiting values, relationships between flowering and pod production, and the effects of seasonal cumulative rainfall. The patterns of seasonal flowering and fruiting series were analyzed using two descriptors: the first distinguishing between regular and variable patterns, and the second analyzing the structure of such variability, classifying it as either irregular or alternating. Despite being subjected to similar climate and agronomic management, individual trees exhibited highly variable flowering and fruiting behaviors within each season, as well as variable patterns of flowering and fruiting across seasons. Seasonal alternate fruiting on a population scale masked highly variable patterns among trees, and only 19 % of the trees exhibited marked alternate fruiting patterns. Variations in pod production on a tree scale were mainly related to variations in trunk flowering. Endogenous factors seemed to control seasonal variations in flowering and fruiting, even though exogenous factors, both climatic and agronomic, could structure flowering and fruiting patterns at the orchard scale.

Optimal decision rules for marked point process models

We study a Markov decision problem in which the state space is the set of finite marked point patterns in the plane, the actions represent thinnings, the reward is proportional to the mark sum which is discounted over time, and the transitions are governed by a birth-death-growth process. We show that thinning points with large marks maximises the discounted total expected reward when births follow a Poisson process and marks grow logistically. Explicit values for the thinning threshold and the discounted total expected reward over finite and infinite horizons are also provided. When the points are required to respect a hard core distance, upper and lower bounds on the discounted total expected reward are derived.

A large-scale type I CBASS antiphage screen identifies the phage prohead protease as a key determinant of immune activation and evasion

Cyclic oligonucleotide-based signaling system (CBASS) is an antiviral system that protects bacteria from phage infection and is evolutionarily related to human cGAS-STING immunity. cGAS-STING signaling is initiated by the recognition of viral DNA, but the molecular cues activating CBASS are incompletely understood. Using a screen of 975 type I CBASS operon-phage challenges, we show that operons with distinct cGAS/DncV-like nucleotidyltransferases (CD-NTases) and CD-NTase-associated protein (Cap) effectors exhibit marked patterns of phage restriction. We find that some type I CD-NTase enzymes require a C-terminal AGS-C immunoglobulin (Ig)-like fold domain for defense against select phages. Escaper phages evade CBASS via protein-coding mutations in virion assembly proteins, and acquired resistance is largely operon specific. We demonstrate that the phage Bas13 prohead protease interacts with the CD-NTase EcCdnD12 and can induce CBASS-dependent growth arrest in cells. Our results define phage virion assembly as a determinant of type I CBASS immune evasion and support viral protein recognition as a putative mechanism of cGAS-like enzyme activation.

Measurement and optimization of writing light field uniformity in dual-galvanometer laser scanning lithography system

The light field uniformity (LFU) in lithography system is a key factor in defining the resolution across the entire micro/nano structures. In this work, a cost-effective and straightforward method based on the focused laser marking on heat-mode resist is proposed for measuring and optimizing the LFU. The factors affecting the LFU are analyzed from the perspectives of optical system aberrations and mechanical assembly error. Subsequently, marking patterns with special structures are designed based on the properties of the heat-mode resist. By analyzing the marked patterns, the LFU of the system is obtained with uniformity coefficient is 42.24%. After optimization achieved by dynamic laser power adjustment, the uniformity coefficient was notably enhanced to 96.11%. This work provides an effective method for measuring and optimizing the LFU in dual-galvanometer laser scanning lithography system.

ARRHYTHMOGENIC RIGHT VENTRICULAR CARDIOMYOPATHY AND CARDIAC SARCOIDOSIS: THE GREY ZONE

Abstract Cardiac sarcoidosis (CS) is a rare multisystem disorder characterized by granulomatous infiltration of the myocardium, whose clinical manifestations can be extremely heterogeneus. We report the case of a 47–year–old man with a previous diagnosis of arrhythmogenic right ventricular cardiomyopathy (ARVD). In history he had a marked arrhythmic pattern with multiple episodes of sustained ventricular arrhythmias, biventricular disfunction (LVEF 37%, RVEF 32%) and extensive biventricular transmural late–gadolinium enhancement (greater than 50%) at cardiac RMN. At EKG epsilon wave mainly seen in precordial leads. In November 2022 he was implanted with bicameral defibrillator and in March 2023 he underwent ablation procedure for ventricular tachycardia with RF with endo–epicardial approach. In May 2023 he arrived at our Centre for acute decompensated heart failure. At restored hemodynamic stability, screening for the possible inclusion in transplant list was started. Right heart catheterization (RHC) showed low cardiac index with no pulmonary hypertension. Chest CT unexpectedly showed the presence of multiple micronodules with perilymphatic distribution with confluent appearance compatible with pulmonary sarcoidosis. In consideration of this result, the transplant program was temporarily postponed and investigations for possible cardiac involvement of an inflammatory nature were started. 18F–FDG PET–CT showed pulmonary, splenic, lymphonodal and especially cardiac uptake in the mid–distal segment of the lateral wall of the left ventricle and in the inferior–apical site suspicious for inflammatory pathology. Unfortunately, both lymphonodal and cardiac biopsies were inconclusive because of insufficient material. Nevertheless, the clinical scenario satisfied the Japanese criteria for possible CS; therefore, treatment with prednisone 1 mg/kg was started and a 18F–FDG PET–CT was planned after 3 months of steroid therapy. CS can disguise as a phenocopy of arrhythmogenic right ventricular cardiomyopathy because of several common characteristics, especially arrhythmic presentation. Due to these similarities, a careful overall evaluation of each patient with ARVD is mandatory as several transplant centers have reported cases of CS in explanted heart with a pretransplant misdiagnosis of ARVD or dilated cardiomiopathy. Performing a chest CT in all ARVD patients as part of transplant screening may be considered.

StCoExpNet: a global co-expression network analysis facilitates identifying genes underlying agronomic traits in potatoes

Key messageWe constructed a gene expression atlas and co-expression network for potatoes and identified several novel genes associated with various agronomic traits. This resource will accelerate potato genetics and genomics research.Potato (Solanum tuberosum L.) is the world's most crucial non-cereal food crop and ranks third in food production after wheat and rice. Despite the availability of several potato transcriptome datasets at public databases like NCBI SRA, an effort has yet to be put into developing a global transcriptome atlas and a co-expression network for potatoes. The objectives of our study were to construct a global expression atlas for potatoes using publicly available transcriptome datasets, identify housekeeping and tissue-specific genes, construct a global co-expression network and identify co-expression clusters, investigate the transcriptional complexity of genes involved in various essential biological processes related to agronomic traits, and provide a web server (StCoExpNet) to easily access the newly constructed expression atlas and co-expression network to investigate the expression and co-expression of genes of interest. In this study, we used data from 2299 publicly available potato transcriptome samples obtained from 15 different tissues to construct a global transcriptome atlas. We found that roughly 87% of the annotated genes exhibited detectable expression in at least one sample. Among these, we identified 281 genes with consistent and stable expression levels, indicating their role as housekeeping genes. Conversely, 308 genes exhibited marked tissue-specific expression patterns. We exemplarily linked some co-expression clusters to important agronomic traits of potatoes, such as self-incompatibility, anthocyanin biosynthesis, tuberization, and defense responses against multiple pathogens. The dataset compiled here constitutes a new resource (StCoExpNet), which can be accessed at https://stcoexpnet.julius-kuehn.de. This transcriptome atlas and the co-expression network will accelerate potato genetics and genomics research.

Identifying local foci of tuberculosis transmission in Moldova using a spatial multinomial logistic regression model

BackgroundMultidrug resistant tuberculosis (MDR-TB) represents a major public health concern in the Republic of Moldova, with an estimated 31% of new and 56% of previously treated TB cases having MDR disease in 2022. A recent genomic epidemiology study of incident TB occurring in 2018 and 2019 found that 92% of MDR-TB was the result of transmission. The MDR phenotype was concentrated among two M. tuberculosis (Mtb) lineages: L2.2.1 (Beijing) and L4.2.1 (Ural). MethodsWe developed and applied a hierarchical Bayesian multinominal logistic regression model to Mtb genomic, spatial, and epidemiological data collected from all individuals with diagnosed TB in Moldova in 2018 and 2019 to identify locations in which specific Mtb strains are being transmitted. We then used a logistic regression model to estimate locality-level factors associated with local transmission. FindingsWe found differences in the spatial distribution and degree of local concentration of disease due to specific strains of Beijing and Ural lineage Mtb. Foci of transmission for four strains of Beijing lineage Mtb, predominantly of the MDR-TB phenotype, were located in several regions, but largely concentrated in Transnistria. In contrast, transmission of Ural lineage Mtb had less marked patterns of spatial aggregation, with a single strain (also of the MDR phenotype) spatially clustered in southern Transnistria. We found a 30% (95% credible interval 2%-80%) increase in odds of a locality being a transmission cluster for each increase of 100 persons per square kilometer, while higher local tuberculosis incidence and poverty were not associated with a locality being a transmission focus. InterpretationOur results identified localities where specific Mtb transmission networks were concentrated and quantified the association between locality-level factors and focal transmission. This analysis revealed Transnistria as the primary area where specific Mtb strains (predominantly of the MDR-TB phenotype) were locally transmitted and suggests that targeted intensified case finding in this region may be an attractive policy option.

Biodiversity and distribution patterns of blooming jellyfish in the Bohai Sea revealed by eDNA metabarcoding

BackgroundThe mass occurrence of scyphozoan jellyfish severely affects marine ecosystems and coastal economies, and the study of blooming jellyfish population dynamics has emerged in response. However, traditional ecological survey methods required for such research have difficulties in detecting cryptic life stages and surveying population dynamics owing to high spatiotemporal variations in their occurrence. The environmental DNA (eDNA) technique is an effective tool for overcoming these limitations.ResultsIn this study, we investigated the biodiversity and spatial distribution characteristics of blooming jellyfish in the Bohai Sea of China using an eDNA metabarcoding approach, which covered the surface, middle, and bottom seawater layers, and sediments. Six jellyfish taxa were identified, of which Aurelia coerulea, Nemopilema nomurai, and Cyanea nozakii were the most dominant. These three blooming jellyfish presented a marked vertical distribution pattern in the offshore regions. A. coerulea was mainly distributed in the surface layer, whereas C. nozakii and N. nomurai showed a upper-middle and middle-bottom aggregation, respectively. Horizontally, A. coerulea and C. nozakii were more abundant in the inshore regions, whereas N. nomurai was mainly distributed offshore. Spearman’s correlation analysis revealed a strong correlation between the eDNA of the three dominant blooming jellyfish species and temperature, salinity, and nutrients.ConclusionsOur study confirms the applicability of the eDNA approach to both biodiverstiy evaluation of blooming jellyfish and investigating their spatial distribution, and it can be used as a supplementary tool to traditional survey methods.

Climate variability, trend, and associated risks: Tana sub-basin, Ethiopia

Abstract The study focused on analyzing the variability and trends of climate parameters in the Tana sub-basin. Various statistical methods and indices were employed to assess precipitation and temperature patterns in the region. The findings indicated a statistically non-significant increasing trend in rainfall across the sub-basin, with values ranging from 1.64 to 5.37 mm/year. In terms of temperature, there was an increasing trend observed, but it was also not statistically significant. The seasonality index ranged between 0.87 and 1.03, indicating different rainfall distribution patterns. In 36.69% of the sub-basin, rainfall occurs in marked seasonal patterns with a long dry season, and the remaining (63.31%) is concentrated in 3 or fewer months, indicating a different rainfall distribution pattern. In addition, the study assessed the precipitation concentration and found that 57.5% of the rainfall data exhibited a strong irregular concentration, 41.5% showed an irregular concentration, and 1% exhibited a moderate concentration. The study underscores the presence of climate variability and trends in the Tana sub-basin, emphasizing the need to align agricultural and water resource management practices with the observed climate variability.