Ammonia-nitrogen (NH3-N) loss from agriculture decreases crop yield potential and environmental quality. Incorporating animal manures by chisel plowing (CP) can reduce NH3 loss but may increase crop residue loss compared to lower disturbance incorporation methods and vertical tillage (VT). Few studies have evaluated VT efficacy for incorporating manure and reducing NH3 concentrations compared to traditional tillage tools, such as CP. Six trials during 2013 to 2016 were conducted to evaluate the impacts of manure incorporation method (CP, VT, or broadcast) and weather conditions at the time of application on NH3-N concentrations at a dairy research farm in central Wisconsin, USA. Passive samplers measured NH3-N concentrations at 30-cm above the ground during the first 0 to 24 and 24 to 48 h post-manure application/incorporation. Average NH3-N concentrations for CP and VT were 44 to 86% of broadcast and similar for most trials, while crop residue coverage for VT was greater than CP (39 and 22% of control plots, respectively). Concentrations of NH3-N were correlated with the amount of plot area covered by manure for the first (r = 0.56, p < 0.0001) and second measurement periods (r = 0.85, p < 0.0001). Results show that VT had comparable NH3-N concentration reductions to CP while conserving more crop residue.