Using GPS data of the Japanese network GEONET, we analyze occurrence of GPS-phase slips and positioning errors during the geomagnetic storm of February 12, 2000. Although the storm was not intensive, registering a minimum Dst excursion of ?133 nT and a maximum Kp = 6.7 value, it attracted the attention of researchers because of the appearance of a super-bubble at mid-latitudes. We identified numerous GPS-phase slips in the area of the super-bubble. By the time of the bubble's appearance, a total of 33% of GPS receivers experienced positioning errors of more than 500 m. Around 13:00 UT, the positioning quality was worse than 100 m almost all of Japan. We also found that the occurrence of phase slips of the satellite signals depends on the angle ? between the receiver-satellite line of sight and geomagnetic field lines. The maximum value of GPS-phase slips corresponds to ? = 0° and 90°. For the satellites positioned close to the magnetic zenith region, the density of phase slips reached 32%. In addition to carrier-phase slips, the super-bubble caused sharp increases in positioning errors of several hundred meters at receiver locations below 38°N latitude. As a result, precise positioning was not possible for about 2 h.