In order to explain and predict the properties of many physical systems, it is essential to understand the interplay of different energy-scales. Here we present investigations of the magnetic order in thermalised artificial spin ice structures, with different activation energies of the interacting Ising-like elements. We image the thermally equilibrated magnetic states of the nano-structures using synchrotron-based magnetic microscopy. By comparing results obtained from structures with one or two different activation energies, we demonstrate a clear impact on the resulting magnetic order. The differences are obtained by the analysis of the magnetic spin structure factors, in which the role of the activation energies is manifested by distinct short-range order. This demonstrates that artificial spin systems can serve as model systems, allowing the definition of energy-scales by geometrical design and providing the backdrop for understanding their interplay.