This study aims to understand the main nutrient composition and comprehensively evaluate the differences in the mineral element contents of fruits of different macadamia cultivars, as well as screen good cultivars that are suitable for use in rocky desert mountains. Nine macadamia nut cultivars were selected as test materials in rocky desert mountain orchards. The contents of crude fat, crude protein, and total soluble sugar in kernels and N, P, K, Ca, Mg, Fe, Mn, Cu, Zn, and B in peels and kernels were determined, respectively. Then, the kernels’ mineral element contents were comprehensively evaluated based on principal component analysis. The results showed that the kernels were rich in crude fat, protein, and soluble sugar, with the crude fat content reaching 75% or greater, and the variation among cultivars was small. However, the variation in soluble sugar content was extensive. The content of mineral elements varied in different cultivars and parts of the fruit, with the average macronutrient content being K > N > Ca > P > Mg in the pericarp and N > K > P > Mg > Ca in the kernel, and the content of micronutrients in the pericarp and the kernel being Mn > Fe > Zn > Cu > B. By principal component analysis, the 10 mineral nutrient indexes were calculated as four principal components, with a cumulative contribution rate of 88.051%. Using the affiliation function value method and the calculation of the comprehensive evaluation value, the nine cultivars could be classified into three categories. The cultivar with the highest comprehensive evaluation value of the mineral element content was O.C. The one with the lowest value was H2, which indicated that O.C is a suitable variety for popularization in rocky desert mountainous areas. Stepwise regression analysis concluded that P, K, Fe, Mn, and Cu were the indicators significantly influencing the mineral element content of macadamia nuts and fruits in rocky desert mountains.
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