Lucie Estuary Research Articles

Nutrient availability in a freshwater-to-marine continuum: cyanobacterial blooms along the Lake Okeechobee Waterway

Water from the Lake Okeechobee watershed historically flowed south through the Everglades. Hydrologic alterations created the Lake Okeechobee Waterway, where lake water is periodically shunted east to the St. Lucie Estuary (C-44 canal) and west to the Caloosahatchee River and Estuary (C-43 canal). Within the last two decades, Microcystis blooms have developed in Lake Okeechobee and been discharged to the downstream urbanized estuaries, resulting in negative environmental and human health impacts. To better understand drivers of cyanobacterial blooms across this modified waterway, two cruises were conducted from the St. Lucie Estuary through Lake Okeechobee to the Caloosahatchee River Estuary during 2019 and 2020. Stations were sampled for environmental parameters, dissolved nutrients, chlorophyll a, cyanobacterial cell concentrations, and microcystins, as well as particulate organic matter (POM) nutrient properties. Higher ammonium (NH4+), nitrate + nitrite (NO3-), dissolved inorganic nitrogen (DIN), soluble reactive phosphorus (SRP), total dissolved phosphorus (TDP), and POM stable N isotope (δ15N) values were observed in the estuaries and Kissimmee River than in Lake Okeechobee. The nitrogen to phosphorus ratio (N:P), microcystins, and Microcystis cell concentrations were higher in Lake Okeechobee than documented over past decades. During Microcystis blooms, high NH4+, SRP, total dissolved nitrogen (TDN), TDP, and sucralose were observed with elevated algal δ15N. These results demonstrate the importance of local basin contributions, including those within the lake, to estuarine Microcystis blooms. This suggests that decreasing nutrient loading within the St. Lucie and Caloosahatchee estuaries would help mitigate these urban blooms. High POM δ15N values, NO3- concentrations, and N:P ratios in the Kissimmee River suggest that expanding urbanization north of the lake, represents an increasing human N source contributing to cyanobacterial blooms in Lake Okeechobee.

Satellite and in situ cyanobacteria monitoring: Understanding the impact of monitoring frequency on management decisions

Cyanobacterial harmful algal blooms (cyanoHABs) in reservoirs can be transported to downstream waters via scheduled discharges. Transport dynamics are difficult to capture in traditional cyanoHAB monitoring, which can be spatially disparate and temporally discontinuous. The introduction of satellite remote sensing for cyanoHAB monitoring provides opportunities to detect where cyanoHABs occur in relation to reservoir release locations, like canal inlets. The study objectives were to assess (1) differences in reservoir cyanoHAB frequencies as determined by in situ and remotely sensed data and (2) the feasibility of using satellite imagery to identify conditions associated with release-driven cyanoHAB export. As a representative case, Lake Okeechobee and the St. Lucie Estuary (Florida, USA), which receives controlled releases from Lake Okeechobee, were examined. Both systems are impacted by cyanoHABs, and the St. Lucie Estuary experienced states of emergency for extreme cyanoHABs in 2016 and 2018. Using the European Space Agency’s Sentinel-3 OLCI imagery processed with the Cyanobacteria Index (CIcyano), cyanoHAB frequencies across Lake Okeechobee from May 2016-April 2021 were compared to frequencies from in situ data. Strong agreement was observed in frequency rankings between the in situ and remotely sensed data in capturing intra-annual variability in bloom frequencies across Lake Okeechobee (Kendall’s tau = 0.85, p-value = 0.0002), whereas no alignment was observed when evaluating inter-annual variation (Kendall’s tau = 0, p-value = 1). Further, remotely sensed observations revealed that cyanoHABs were highly frequent near the inlet to the canal connecting Lake Okeechobee to the St. Lucie Estuary in state-of-emergency years, a pattern not evident from in situ data alone. This study demonstrates how remote sensing can complement traditional cyanoHAB monitoring to inform reservoir release decision making.

Long-Term Assessment of Surface Water Quality in a Highly Managed Estuary Basin.

Anthropogenic developments in coastal watersheds cause significant ecological changes to estuaries. Since estuaries respond to inputs on relatively long time scales, robust analyses of long-term data should be employed to account for seasonality, internal cycling, and climatological cycles. This study characterizes the water quality of a highly managed coastal basin, the St. Lucie Estuary Basin, FL, USA, from 1999 to 2019 to detect spatiotemporal differences in the estuary’s water quality and its tributaries. The estuary is artificially connected to Lake Okeechobee, so it receives fresh water from an external basin. Monthly water samples collected from November 1999 to October 2019 were assessed using principal component analysis, correlation analysis, and the Seasonal Kendall trend test. Nitrogen, phosphorus, color, total suspended solids, and turbidity concentrations varied seasonally and spatially. Inflows from Lake Okeechobee were characterized by high turbidity, while higher phosphorus concentrations characterized inflows from tributaries within the basin. Differences among tributaries within the basin may be attributed to flow regimes (e.g., significant releases vs. steady flow) and land use (e.g., pasture vs. row crops). Decreasing trends for orthophosphate, total phosphorus, and color and increasing trends for dissolved oxygen were found over the long term. Decreases in nutrient concentrations over time could be due to local mitigation efforts. Understanding the differences in water quality between the tributaries of the St. Lucie Estuary is essential for the overall water quality management of the estuary.

Modeling primary production: Developing the BZI model from the production-irradiance (P-I) curves

The linearity of the BZI (biomass, photic depth and irradiance) regression model for the estimate of depth-integrated primary productivity in the water column is evaluated. It is shown that the linear model can be derived from traditional production-irradiance (P-I) curves by assuming a linear production-irradiance relationship. A correction tem is obtained for water depth shallower than the photic depth. The analysis revealed that the slope of the linear BZI model is determined by the slope of the P-I curve. Following similar steps and assumptions, some of the well-known nonlinear light functions such as Steele's function, Smith's function and the Monod function were analytically integrated yielding nonlinear BZI models which go through the origin naturally allowing zero productivity at zero light. The nonlinear model integrated from Steele's function was successfully applied to three subtropical estuaries in Florida: the St. Lucie Estuary on the east coast, the Caloosahatchee River and Estuary and the Escambia Bay on the west coast. Despite being more faithful to theory (zero intercept), the non-linear version yielded only slightly better results than the linear model.

Dynamics of microcystins and saxitoxin in the Indian River Lagoon, Florida

Harmful algal blooms that can produce toxins are common in the Indian River Lagoon (IRL), which covers ~250 km of Florida's east coast. The current study assessed the dynamics of microcystins and saxitoxin in six segments of the IRL: Banana River Lagoon (BRL), Mosquito Lagoon (ML), Northern IRL (NIRL), Central IRL (CIRL), Southern IRL (SIRL), and the St. Lucie Estuary (SLE). Surface water samples (n=40) collected during the 2018 wet and 2019 dry season were analyzed to determine associations between toxins and temperature, salinity, pH, oxygen saturation, concentrations of dissolved nutrients and chlorophyll-a, presence of biosynthetic genes for toxins, relative abundance of planktonic species, and composition of the microbial community. The potential toxicity of samples was assessed using multiple mammalian cell lines. Enzyme-Linked Immunosorbent Assays were used to determine concentrations of microcystins and saxitoxin. Overall, the microcystins concentration ranged between 0.01-85.70 µg/L, and saxitoxin concentrations ranged between 0.01-2.43 µg/L across the IRL. Microcystins concentrations were 65% below the limit of quantification (0.05 µg/L), and saxitoxin concentrations were 85% below the limit of detection (0.02 µg/L). Microcystins concentrations were higher in the SLE, while saxitoxin was elevated in the NIRL and BRL. Cytotoxicity related to the presence of microcystins was seen in the SLE during the wet season. No significant patterns between cytotoxicity and saxitoxin were identified. Dissolved nutrients were identified as the most highly related parameters, explaining 53% of microcystin and 47% of saxitoxin variability. Multivariate models suggested cyanobacteria, flagellates, ciliates, and diatoms as the subset of microorganisms whose abundances were maximally correlated with saxitoxin and microcystins concentrations. Lastly, biosynthetic genes for microcystins were detected in the SLE and for saxitoxin in the BRL and NIRL. These results highlight the synergistic roles environmental and biological parameters play in influencing the dynamics of toxin production by harmful algae in the IRL.

Defining the sediment prokaryotic communities of the Indian River Lagoon, FL, USA, an Estuary of National Significance.

The Indian River Lagoon, located on the east coast of Florida, USA, is an Estuary of National Significance and an important economic and ecological resource. The Indian River Lagoon faces several environmental pressures, including freshwater discharges through the St. Lucie Estuary; accumulation of anoxic, fine-grained, organic-rich sediment; and metal contamination from agriculture and marinas. Although the Indian River Lagoon has been well-studied, little is known about its microbial communities; thus, a two-year 16S amplicon sequencing study was conducted to assess the spatiotemporal changes of the sediment bacterial and archaeal groups. In general, the Indian River Lagoon exhibited a prokaryotic community that was consistent with other estuarine studies. Statistically different communities were found between the Indian River Lagoon and St. Lucie Estuary due to changes in porewater salinity causing microbes that require salts for growth to be higher in the Indian River Lagoon. The St. Lucie Estuary exhibited more obvious prokaryotic seasonality, such as a higher relative abundance of Betaproteobacteriales in wet season and a higher relative abundance of Flavobacteriales in dry season samples. Distance-based linear models revealed these communities were more affected by changes in total organic matter and copper than changes in temperature. Anaerobic prokaryotes, such as Campylobacterales, were more associated with high total organic matter and copper samples while aerobic prokaryotes, such as Nitrosopumilales, were more associated with low total organic matter and copper samples. This initial study fills the knowledge gap on the Indian River Lagoon bacterial and archaeal communities and serves as important data for future studies to compare to determine possible future changes due to human impacts or environmental changes.

Hurricane Disturbance Stimulated Nitrification and Altered Ammonia Oxidizer Community Structure in Lake Okeechobee and St. Lucie Estuary (Florida).

Nitrification is an important biological link between oxidized and reduced forms of nitrogen (N). The efficiency of nitrification plays a key role in mitigating excess N in eutrophic systems, including those with cyanobacterial harmful algal blooms (cyanoHABs), since it can be closely coupled with denitrification and removal of excess N. Recent work suggests that competition for ammonium (NH4+) between ammonia oxidizers and cyanoHABs can help determine microbial community structure. Nitrification rates and ammonia-oxidizing archaeal (AOA) and bacterial (AOB) community composition and gene abundances were quantified in Lake Okeechobee and St. Lucie Estuary in southern Florida (United States). We sampled during cyanobacterial (Microcystis) blooms in July 2016 and August 2017 (2 weeks before Hurricane Irma) and 10 days after Hurricane Irma made landfall. Nitrification rates were low during cyanobacterial blooms in Lake Okeechobee and St. Lucie Estuary, while low bloom conditions in St. Lucie Estuary coincided with greater nitrification rates. Nitrification rates in the lake were correlated (R2 = 0.94; p = 0.006) with AOA amoA abundance. Following the hurricane, nitrification rates increased by an order of magnitude, suggesting that nitrifiers outcompeted cyanobacteria for NH4+ under turbid, poor light conditions. After Irma, AOA and AOB abundances increased in St. Lucie Estuary, while only AOB increased in Lake Okeechobee. AOA sequences clustered into three major lineages: Nitrosopumilales (NP), Nitrososphaerales (NS), and Nitrosotaleales (NT). Many of the lake OTUs placed within the uncultured and uncharacterized NS δ and NT β clades, suggesting that these taxa are ecologically important along this eutrophic, lacustrine to estuarine continuum. After the hurricane, the AOA community shifted toward dominance by freshwater clades in St. Lucie Estuary and terrestrial genera in Lake Okeechobee, likely due to high rainfall and subsequent increased turbidity and freshwater loading from the lake into the estuary. AOB community structure was not affected by the disturbance. AOA communities were consistently more diverse than AOB, despite fewer sequences recovered, including new, unclassified, eutrophic ecotypes, suggesting a wider ecological biogeography than the oligotrophic niche originally posited. These results and other recent reports contradict the early hypothesis that AOB dominate ammonia oxidation in high-nutrient or terrestrial-influenced systems.

Hurricanes, El Ni\xf1o and harmful algal blooms in two sub-tropical Florida estuaries: Direct and indirect impacts

Future increases in the intensity of hurricanes and El Niño periods predicted by climate change models have focused attention on their role in stimulating harmful algal blooms (HABs). A series of hurricanes that recently impacted Florida (USA) provided a unique opportunity to explore the relationships between hurricanes, El Niño and HABs in two Florida estuaries subject to repeated intense ecosystem disruptive HABs, the Indian River Lagoon and the St. Lucie Estuary. The roles that hurricanes and El Niño play in contributing to HAB events are examined in the context of key structural and functional features of each estuary and their watersheds, including morphology, water residence time and hydrology, such as the influence of Lake Okeechobee discharges into the St. Lucie Estuary. The most direct impact was the increase in rainfall associated with hurricanes and El Niño, resulting in enhanced nutrient loads which drive HABs in the Indian River Lagoon and Lake Okeechobee. Major HABs in Lake Okeechobee also present an indirect threat of freshwater HAB blooms in the St. Lucie Estuary via mandated discharges from the lake into the estuary during high rainfall periods. Conversely, during the absence of HABs in Lake Okeechobee, short water residence times produced by discharges into the St. Lucie Estuary can result in lower bloom intensities.

Short Term Effects of Hurricane Irma and Cyanobacterial Blooms on Ammonium Cycling Along a Freshwater–Estuarine Continuum in South Florida

Lacustrine and coastal systems are vulnerable to the increasing number and intensity of tropical storms driven by climate change. Strong winds associated with tropical storms can mobilize nutrients in sediments and alter nitrogen and phosphorus cycling, leading to amplification of preexisting conditions, such as eutrophication and cyanobacterial blooms (cyanoHABs). In 2016, Florida declared a State of Emergency within and downstream of Lake Okeechobee (LO) due to toxic cyanobacterial blooms (primarily Microcystis). The blooms originated in LO, but flood control measures released water from LO to the brackish St. Lucie Estuary (SLE). In September 2017, Hurricane Irma traversed the Florida peninsula with sustained winds exceeding 160 km h-1, generating torrential rains over the watershed. We quantified ammonium (NH4+) regeneration and potential uptake rates, and Microcystis toxin gene (mcyD) abundance in LO and SLE during the massive bloom in July 2016, the bloom in August 2017 (two weeks before Irma), and 10 days after Hurricane Irma landfall. In 2016, cyanoHABs were present in both LO and SLE, and potential NH4+ uptake rates were high in both systems. In 2017, the bloom was constrained to LO, and potential NH4+ uptake rates in LO exceeded those in SLE, and mcyD gene abundance was greater in LO than SLE. Post Hurricane Irma, potential NH4+ uptake rates decreased significantly in LO and SLE, while mcyD gene abundance decreased in LO and increased slightly in SLE. Average NH4+ regeneration rates could support 25–40% of water column potential NH4+ demand in the lake and, when extrapolated to the entire LO water column, exceeded external nitrogen loading. These results emphasize the importance of internal NH4+ recycling for bloom expansion and toxicity in the lake and downstream estuaries. In 2018, the cyanobacterial bloom in the Okeechobee region was one of the largest recorded and is presumed to be driven by the aftermath of Hurricane Irma. Large-scale blooms have also been observed in SLE, likely due to LO flushing and decreased salinity post hurricane. Thus, results from this study support predictions that increased frequency and strength of tropical storms will lead to more intense blooms in aquatic systems.

Large-scale assessment of mercury in sentinel estuarine fishes of the Florida Everglades and adjacent coastal ecosystems

In Florida, USA, mercury can bioaccumulate in aquatic food webs to levels that are harmful to human and ecosystem health. Proposed efforts to restore hydrological flow in the Florida Everglades, which encompasses projects throughout central and south Florida, may alter the spatial distribution and temporal trends in mercury bioaccumulation in Florida fish populations. Monitoring of mercury in sentinel fish species permits assessment of changing conditions and can identify natural or anthropogenic impacts on upstream watersheds and predict regional influences on human and wildlife consumers of these fish species. From 2006 through 2008, we assessed total mercury in muscle of 545 gray snapper, Lutjanus griseus (Linnaeus, 1758), and 381 crevalle jack, Caranx hippos (Linnaeus, 1766), from 13 broad estuarine regions in central and south Florida, downstream of proposed Everglades restoration projects. For comparison, we assessed an additional 134 gray snapper collected from adjacent offshore waters in the Gulf of Mexico in 2007–2008 and 2014–2015. Collectively, these results indicate that Florida Bay and Card and Barnes sounds are mercury hot spots for both fish species in Florida estuarine and coastal ecosystems. Mean mercury concentrations in these species from Florida Bay were 1.7–2.5 times those measured in Atlantic coast estuaries (i.e., Loxahatchee estuary, St. Lucie estuary, and Indian River Lagoon). Mercury in snapper from offshore gulf waters did not reveal spatial differences from adjacent coastal estuaries, but did suggest concentrations in offshore snapper have remained stable in recent years. These results provide comprehensive baseline data that can be used to identify mercury hot spots in south Florida and for monitoring temporal and spatial changes in estuarine and coastal mercury concentrations as Everglades restoration plans are implemented.

Time series trend analysis and prediction of water quality in a managed canal system, Florida (USA)

Water quality in the Everglades canal system discharging into the St. Lucie Estuary in south Florida is greatly influenced by anthropogenic activities. We analyzed the water quality parameters trend from 1979 to 2014 using seasonal trend decomposition and LOESS of four canals (C23, C24, C25, and C44). We also predicted the value of total nitrogen (TN) and total Phosphorus (TP) and turbidity from 2016 to 2020 using exponential smoothing and additive Holt-winters method. The main goals of this paper were to reveal long-term changes trends in water quality and identify the emphasis of management in the near future. We found that the change range of water quality parameters was different, but change rules were similar. The mean of DO at each station was in the range of 5.0∼6.3 mg l-1, and the colour was in the range of 5 ∼ 400PCU. The highest specific conductivity was 2250 μS cm-1 in C24 and the lowest was 125 μS cm-1 in C44, and the minimum turbidity was only 0.4 NTU at C25 and the maximum value was 90.3 NTU at C44. The mean value of TN at each station was C24>C44 >C23>C25, and TP was C24>C23>C44>C25. Nutrient export exhibited an upward trend for TN from all the basins and downward trend was present for TP. Water quality was influenced by rainstorm and non-point source pollution. Our predictions showed that TN and TP concentrations in C23 canal were higher than other three canals every month and turbidity of C44 canal was higher than other three canals. Therefore, improved best management practices should be implemented on land that have high TN and TP concentrations in runoff and leachate flowing into the C23 canal.

Septic systems contribute to nutrient pollution and harmful algal blooms in the St. Lucie Estuary, Southeast Florida, USA

Nutrient enrichment is a significant global-scale driver of change in coastal waters, contributing to an array of problems in coastal ecosystems. The St. Lucie Estuary (SLE) in southeast Florida has received national attention as a result of its poor water quality (elevated nutrient concentrations and fecal bacteria counts), recurring toxic Microcystis aeruginosa blooms, and its proximity to the northern boundary of tropical coral species in the United States. The SLE has an artificially large watershed comprised of a network of drainage canals, one of which (C-44) is used to lower the water level in Lake Okeechobee. Public attention has primarily been directed at nutrient inputs originating from the lake, but recent concern over the importance of local watershed impacts prompted a one-year watershed study designed to investigate the interactions between on-site sewage treatment and disposal systems (OSTDS or septic systems), groundwaters, and surface waters in the SLE and nearshore reefs. Results provided multiple lines of evidence of OSTDS contamination of the SLE and its watershed: 1) dissolved nutrients in groundwaters and surface waters were most concentrated adjacent to two older (pre-1978) residential communities and the primary canals, and 2) sucralose was present in groundwater at residential sites (up to 32.0μg/L) and adjacent surface waters (up to 5.5μg/L), and 3) δ15N values in surface water (+7.5 o/oo), macroalgae (+4.4 o/oo) and phytoplankton (+5.0 o/oo) were within the published range (>+3 o/oo) for sewage N and similar to values in OSTDS-contaminated groundwaters. Measured δ15N values in M. aeruginosa became increasingly enriched during transport from the C-44 canal (∼5.8 o/oo) into the mid-estuary (∼8.0 o/oo), indicating uptake and growth on sewage N sources within the urbanized estuary. Consequently, there is a need to reduce N and P loading, as well as fecal loading, from the SLE watershed via septic-to-sewer conversion projects and to minimize the frequency and intensity of the releases from Lake Okeechobee to the SLE via additional water storage north of the lake. These enhancements would improve water quality in both the SLE and Lake Okeechobee, reduce the occurrence of toxic harmful algal blooms in the linked systems, and improve overall ecosystem health in the SLE and downstream reefs.

Toxin composition of the 2016 Microcystis aeruginosa bloom in the St. Lucie Estuary, Florida

A bloom of the cyanobacteria, Microcystis aeruginosa occurred in the St. Lucie Estuary during the summer of 2016, stimulated by the release of waters from Lake Okeechobee. This cyanobacterium produces the microcystins, a suite of heptapeptide hepatotoxins. The toxin composition of the bloom was analyzed and was compared to an archived bloom sample from 2005. Microcystin-LR was the most abundant toxin with lesser amounts of microcystin variants. Nodularin, cylindrospermopsin and anatoxin-a were not detected.

Spatiotemporal change of phosphorous speciation and concentration in stormwater in the St. Lucie Estuary watershed, South Florida

Phosphorous (P) concentration in stormwater runoff varies at different spatial and temporal scales. Excessive P loading from agriculture system into the St. Lucie Estuary (SLE) contributed to water quality deterioration in southern Indian River Lagoon. This study examines the spatial and temporal shifts of different P forms in runoff and storm water under different land use, water management, and rainfall conditions. Storm water samplings were conducted monthly between April 2013 and December 2014 in typical farmland and along the waterway (Canal C-24) that connects lands to the SLE. Concentrations of different P forms and related water quality variables were measured. Approximately 89% of the collected water samples contained total P (TP) concentrations exceeding the total maximum daily load (TMDL) level (0.081 mg L−1). Concentrations of different P forms declined from agricultural field furrows to the canal and then increased from the upstream to the downstream in the canal where urban activities dominated land use. Total dissolved P (TDP) was the predominant form of TP, followed by PO4-P. Speciation and concentrations of P varied with sites and sampling times, but were significantly higher in the summer months (from June to September) than in the winter. Water pH explained ∼20% of TP variation. Spatiotemporal variations of P concentrations and compositions provide a data-based guide for development of best management practices (BMPs) to minimize P export from the SLE watershed.

Ecological drivers and habitat associations of estuarine bivalves

Community composition of the infaunal bivalve fauna of the St. Lucie Estuary and southern Indian River Lagoon, eastern Florida was sampled quarterly for 10 years as part of a long-term benthic monitoring program. A total of 38,514 bivalves of 137 taxa were collected and identified. We utilized this data, along with sediment samples and environmental measurements gathered concurrently, to assess the community composition, distribution, and ecological drivers of the infaunal bivalves of this estuary system. Salinity had the strongest influence on bivalve assemblage across the 15 sites, superseding the influences of sediment type, water turbidity, temperature and other environmental parameters. The greatest diversity was found in higher salinity euhaline sites, while the greatest abundance of individual bivalves was found in medium salinity mixohaline sites, the lowest diversity and abundances were found in the low salinity oligohaline sites, demonstrating a strong positive association between salinity and diversity/abundance. Water management decisions for the estuary should incorporate understanding of the role of salinity on bivalve diversity, abundance, and ecosystem function.

The application of oyster and seagrass models to evaluate alternative inflow scenarios related to Everglades restoration

The South Florida landscape is highly engineered featuring ∼3380km of canals, ∼1225 water control structures, >70 pumping stations, managed wetlands, densely populated coastal watersheds, and impacted estuaries. Landscape scale agricultural and urban modifications require flood control which sometimes results in the release of excess freshwater that potentially damages estuarine ecology. The Central Everglades Planning Project (CEPP) is a partnership between the U.S. Army Corps of Engineers and the South Florida Water Management District focused on restoring natural patterns of freshwater flow to the Everglades and associated estuaries. One of the primary project goals is to reduce deleterious inflows eastward to the St. Lucie Estuary (SLE) and westward to the Caloosahatchee River Estuary (CRE) by diverting freshwater south from Lake Okeechobee. Performance evaluation of the CEPP relies upon integrated modeling which links the watershed engineering projects to estuarine salinities and biotic responses. The objective of this study was to utilize seagrass and oyster models to evaluate the effectiveness of alternative inflow scenarios. There are three different scenarios: the existing condition base (ECB), the future without proposed CEPP projects (FWO) but with other landscape features that could alter freshwater inflows, and alternative 4R (ALT4R) that incorporates a suite of restoration projects including those associated with the CEPP. Each of these inflow scenarios was used to generate daily salinity time series from 1965 to 2005 at multiple locations in the SLE and CRE which were used to run site-specific seagrass and oyster models. The hydrodynamic and ecological effects of freshwater inflow were greater in the SLE compared to the much larger CRE. Predicted densities of oysters (individualsm−2) and seagrass (shootsm−2) were greater in the wet season (May–Oct) vs. the dry season (Nov–Apr) in both estuaries. Oyster and seagrass densities increased under the ALT4R inflow scenario that mitigated high inflows to the estuaries in the wet season. This result improved environmental conditions while increasing freshwater availability for other parts of the Greater Everglades and the southern estuaries such as Florida Bay and Biscayne Bay.

Effects of contaminated St. Lucie River saltwater sediments on an amphipod (Ampelisca abdita) and a hard-shell clam (Mercenaria mercenaria).

The St. Lucie estuary (SLE) ecosystem in South Florida has been shown to be contaminated with metals and pesticides. Our earlier studies also showed that aquatic organisms, especially benthic species in the SLE ecosystem, might be potentially at high risk from copper (Cu) exposure. The objectives of this study were to conduct studies with separate groups of organisms exposed to seven field-collected sediment samples from the St. Lucie River according to standard procedures to evaluate toxicity and tissue concentrations of Cu and zinc (Zn). Short term and longer term whole sediment acute toxicity studies were performed with Ampelisca abdita and Mercenaria mercenaria. Analysis of sediment chemical characteristics showed that Cu and Zn are of most concern because their concentrations in 86 % of the sediments were higher than the threshold effect concentrations for Florida sediment quality criteria and the National Oceanic and Atmospheric Administration Screening Quick Reference Tables (SQuiRTs) sediment values. There was no significant effect on survival of the tested organisms. However, increased Cu and Zn concentrations in the test organisms were found. Dry weight of the tested organisms was also inversely related to Cu and Zn concentrations in sediments and organisms. The effects on organism weight and Cu and Zn uptake raise concerns about the organism population dynamics of the ecosystem because benthic organisms are primary food sources in the SLE system and are continuously exposed to Cu- and Zn-contaminated sediments throughout their life cycle. The results of the present study also indicate that Cu and Zn exposures by way of sediment ingestion are important routes of exposure.

Fine-scale population structure of estuarine bottlenose dolphins (Tursiops truncatus) assessed using stable isotope ratios and fatty acid signature analyses

Stable isotope ratios and fatty acid signature analyses were employed to examine the fine-scale population structure of a year-round resident population of 600–800 bottlenose dolphins (Tursiops truncatus) in the Indian River Lagoon (IRL), Florida. The IRL, a 250-km-long estuary running along the central east coast of Florida (28.0°N, 80.6°W), is comprised of the northern and southern IRL, Mosquito Lagoon (ML), Banana River (BR), and St. Lucie Estuary. Samples of skin and blubber were collected from dead stranded (n = 61, 1994–2004) and live dolphins (n = 153, 2002–2007, 2010, 2011) from throughout the IRL and surrounding environs. Using stable isotopes (SI), dolphins could be assigned to a ML subpopulation, a St. Lucie Estuary subpopulation, and an IRL subpopulation. Fatty acid signature analysis (FASA) allowed for finer resolution, detecting ML and BR subpopulations, a separation of northern and southern IRL subpopulations, and a St. Lucie Estuary subpopulation. Differences between sexes were detectable within subpopulations using FASA, but not using SI. This may indicate that males and females are foraging in similar locations at a similar trophic level (detected using SI), but are varying in the types or proportions of specific prey (indicated by FASA). The combination of these complementary analyses results in a powerful tool for assessing fine-scale population substructure.

Impacts of Freshwater Management Activities on Eastern Oyster (Crassostrea virginica) Density and Recruitment: Recovery and Long-Term Stability in Seven Florida Estuaries

Eastern oysters, Crassostrea virginica (Gmelin 1791), were sampled from seven Florida estuaries from January 2005 through December 2007 as part of the prerestoration monitoring and assessment component of the Comprehensive Everglades Restoration Plan. Study locations included Tampa Bay, Mosquito Lagoon, Sebastian River, St. Lucie estuary (3 study sites), Loxahatchee River (2 study sites), Lake Worth Lagoon, and Biscayne Bay. Settled oyster density was monitored twice per year at stations within each study site. Oyster recruitment, water temperature, and salinity were monitored on a monthly basis. Salinity varied greatly among the estuaries, and each study site fell into 1 of 2 primary salinity regimes: one relatively stable and with higher salinities (mean range, 24-35), and the other more variable and with lower salinities (mean range, 12-17). All 7 estuaries were impacted, to varying degrees, by the relatively active 2005 tropical storm season as well as local water management practices during the study. Two of the estuaries, St. Lucie and the Sebastian River, were severely impacted by controlled introductions of freshwater, which decreased salinities below the range that oysters can tolerate. As a result, live oysters were virtually absent from the study sites in both estuaries in 2005, when the freshwater introductions were most pronounced. At the opposite extreme, long-term reduction of freshwater flow into Biscayne Bay has exacerbated already increasing salinities and has resulted in the absence of reef-building oysters at that study site. Oysters were present at all other study sites, but densities were lower in 2005 than in subsequent years because of substantial salinity decreases after tropical storms in 2004 and 2005. The greatest and most stable oyster densities were found in Tampa Bay, where mean oyster density reached 400/m 2 by fall 2007. Recruitment was observed at each site on recruitment arrays retrieved from April through December, although the timing, duration, and intensity of the recruitment season varied annually and among study sites. The Tampa Bay, Mosquito Lagoon, Loxahatchee River, and Lake Worth Lagoon sites exhibited a bimodal recruitment pattern with peaks in the spring and fall. At the remaining sites, which were the most strongly affected by water management practices, recruitment patterns were sporadic and inconsistent throughout the study. The lowest recruitment rates occurred in 2005, when the density of settled oysters was also low, presumably because of reduced salinities resulting from a combination of active tropical storm seasons and controlled freshwater introductions.

Seasonal dissolved inorganic nitrogen and phosphorus budgets for two sub-tropical estuaries in south Florida, USA

Abstract. Interactions among geomorphology, circulation, and biogeochemical cycling determine estuary responses to external nutrient loading. In order to better manage watershed nutrient inputs, the goal of this study was to develop seasonal dissolved inorganic nitrogen (DIN) and phosphorus (DIP) budgets for the two estuaries in south Florida, the Caloosahatchee River estuary (CRE) and the St. Lucie Estuary (SLE), from 2002 to 2008. The Land–Ocean Interactions in the Coastal Zone (LOICZ) approach was used to generate water, salt, and DIN and DIP budgets. Results suggested that internal DIN production increases with increased DIN loading to the CRE in the wet season. There were hydrodynamic effects as water column concentrations and ecosystem nutrient processing stabilized in both estuaries as flushing time increased to >10 d. The CRE demonstrated heterotrophy (net ecosystem metabolism or NEM < 0.0) across all wet and dry season budgets. While the SLE was sensitive to DIN loading, system autotrophy (NEM > 0.0) increased significantly with external DIP loading. This included DIP consumption and a bloom of a cyanobacterium (Microcystis aeruginosa) following hurricane-induced discharge to the SLE in 2005. Additionally, while denitrification provided a microbially-mediated N loss pathway for the CRE, this potential was not evident for the SLE where N2 fixation was favored. Disparities between total and inorganic loading ratios suggested that the role of dissolved organic nitrogen (DON) should be assessed for both estuaries. Nutrient budgets indicated that net internal production or consumption of DIN and DIP fluctuated with inter- and intra-annual variations in freshwater inflow, hydrodynamic flushing, and primary production. The results of this study should be included in watershed management plans in order to maintain favorable conditions of external loading relative to internal material cycling in both dry and wet seasons.