Emergence of seedlings of four alvar grassland species (Arenaria serpyllifolia, Festuca ovina, Filipendula vulgaris and Veronica spicata) in bryophyte and lichen carpets was analysed in a series of greenhouse experiments. The aspects investigated were: the influence of thickness of moss mats, both in dry and moist conditions, the effects of thick Cladonia spp. clumps, and of living vs dead moss shoots and lichen podetia. Overall, Festuca seedlings emerged best whereas the small‐seeded species, Arenaria and Veronica , had the lowest emergence. Moisture had a significant effect only on the emergence of Festuca seedlings, which emerged better in the dry treatment than in the moist. A thick moss cover negatively affected seedling emergence of Arenaria and Veronica but did not affect the emergence of Festuca. Filipendula showed lower seedling emergence in both thick and thin moss than on bare soil only in the dry treatment, whereas in the moist treatment emergence did not differ among the three substrates. Arenaria seedlings emerged less in thick and thin moss than on bare soil in the dry treatment, whereas in the moist treatment emergence in the thin moss was not different from bare soil. Thus, in relatively dry environments even a thin moss cover may inhibit rather than facilitate seedling emergence. The lichen clumps inhibited only the emergence of the forbs. Both living moss shoots and lichen podetia inhibited emergence of Veronica seedlings but did not affect Festuca. In contrast, emergence in the presence of dead mosses and lichens did not differ from emergence in their absence for both species. Hence, inhibition of seedling emergence by bryophytes and lichens of at least some vascular plant species may be mediated by some biotic factor. However, the effect of differences in substrate properties on germination cannot be excluded