The research on the modal characteristic analysis of long-span bridges is crucial for vibration analysis and control, yet literature regarding the modal characteristics of long-span bridges remains limited. This study thus aims to introduce a strain energy-based damping model to estimate the modal damping of long-span cable-supported bridges. Two different systems of cable-supported bridges are analyzed, and the strain energy proportions and modal damping ratios of various substructures for each mode are calculated. Based on the analysis of modal strain energy results, a strategy to control the vibration of long-span bridges is proposed and validated using the finite element methods. The results indicate that the main girder exhibits the highest strain energy proportion in low-order lateral bending modes, while it is the main cable in low-order vertical bending modes. Different substructures in higher-order modes contribute to the strain energy in varying proportions. For a specific mode, increasing the material damping of the substructure with the highest strain energy proportion effectively suppresses the vibration amplitude of the main girder in that mode. Additionally, installing V-shaped damping cables to control the vibration of substructures with higher strain energy proportions effectively suppresses the vibration of the main girder.