Low-diversity Communities Research Articles

Change in microbial profile and environmental conditions in a constructed wetland system treating greywater.

The objective of this work was to verify the relationships between environmental conditions and microbial processes along a raw-light greywater flow in an improved constructed wetland (CW) system. Physicochemical analysis and high-throughput DNA sequencing were performed in the different zones to investigate the environmental conditions and microbial communities. The results showed that the system operated predominantly under anaerobic conditions, with redox potential (Eh) increasing from the inlet (-342.9 mV) to the outlet (-316.4 mV). Conversely, the chemical oxygen demand (COD) decreased along the greywater flow, suggesting negative correlation between these characteristics. The zones of the evapotranspiration and treatment tank (CEvaT) were characterized by lower community diversity and richness and by the presence of specific groups: Proteobacteria and Synergistetes related to the first steps of the conversion of organic carbon, in the bottom layer inside the anaerobic chamber (AnC); methanogens (Methanosaeta and Methanobacterium) and sulphate-reducing bacteria (Desulfovibrio, Desulforhabdus and Desulfomonile) in the middle layer; and microorganisms associated with the nitrogen cycle and oxygen release (Acinetobacter, Novosphingobium, Candidatus Nitrososphaera) in the top layer. On the other hand, the increase of the ORP and decrease of organic matter concentrations were associated with higher community diversity and richness in the middle layer of the CW, which showed higher abundance of microorganisms involved in methane (Methylobacterium and Candidatus Koribacter) and sulphur (Rhodoblastus and Thiobacillus) oxidation.

In Vivo Entombment of Bacteria and Fungi during Calcium Oxalate, Brushite, and Struvite Urolithiasis.

Human kidney stones form via repeated events of mineral precipitation, partial dissolution, and reprecipitation, which are directly analogous to similar processes in other natural and manmade environments, where resident microbiomes strongly influence biomineralization. High-resolution microscopy and high-fidelity metagenomic (microscopy-to-omics) analyses, applicable to all forms of biomineralization, have been applied to assemble definitive evidence of in vivo microbiome entombment during urolithiasis. Stone fragments were collected from a randomly chosen cohort of 20 patients using standard percutaneous nephrolithotomy (PCNL). Fourier transform infrared (FTIR) spectroscopy indicated that 18 of these patients were calcium oxalate (CaOx) stone formers, whereas one patient formed each formed brushite and struvite stones. This apportionment is consistent with global stone mineralogy distributions. Stone fragments from seven of these 20 patients (five CaOx, one brushite, and one struvite) were thin sectioned and analyzed using brightfield (BF), polarization (POL), confocal, super-resolution autofluorescence (SRAF), and Raman techniques. DNA from remaining fragments, grouped according to each of the 20 patients, were analyzed with amplicon sequencing of 16S rRNA gene sequences (V1-V3, V3-V5) and internal transcribed spacer (ITS1, ITS2) regions. Bulk-entombed DNA was sequenced from stone fragments in 11 of the 18 patients who formed CaOx stones, and the patients who formed brushite and struvite stones. These analyses confirmed the presence of an entombed low-diversity community of bacteria and fungi, including Actinobacteria, Bacteroidetes, Firmicutes, Proteobacteria, and Aspergillus niger. Bacterial cells approximately 1 μm in diameter were also optically observed to be entombed and well preserved in amorphous hydroxyapatite spherules and fans of needle-like crystals of brushite and struvite. These results indicate a microbiome is entombed during in vivo CaOx stone formation. Similar processes are implied for brushite and struvite stones. This evidence lays the groundwork for future in vitro and in vivo experimentation to determine how the microbiome may actively and/or passively influence kidney stone biomineralization.

Effective Management Practices for Increasing Native Plant Diversity on Mesquite Savanna-Texas Wintergrass-Dominated Rangelands

Throughout the Rolling Plains and Cross Timbers ecoregions of Texas, native grassland plant communities have been converted into low-diversity plant communities by long-term, intensive overgrazing by cattle and fire suppression. Much of the historical plant community has become dominated by annuals, Texas wintergrass (Nassella leucotricha), and honey mesquite (Prosopis glandulosa). This degradation has been so severe that many native bird species, including Northern bobwhite (Colinus virginianus), have experienced drastic population declines. We conducted a small-plot study to determine effective management actions for transforming mesquite savanna−Texas wintergrass communities to diverse native plant communities supportive of native wildlife species. We tested multiple management practices following mechanical mesquite brush removal, including seeding, timed treatments of herbicide, prescribed burns, and high-intensity, short-duration cattle grazing. Results indicated that plots receiving early spring treatments of herbicide followed by burning and grazing over 2 consecutive yr best reduced cool-season grasses and promoted overall restoration goals by increasing native warm-season grass and forb establishment.

Greenhouse conditions in lower Eocene coastal wetlands?-Lessons from Schöningen, Northern Germany.

The Paleogene succession of the Helmstedt Lignite Mining District in Northern Germany includes coastal peat mire records from the latest Paleocene to the middle Eocene at the southern edge of the Proto-North Sea. Therefore, it covers the different long- and short-term climate perturbations of the Paleogene greenhouse. 56 samples from three individual sections of a lower Eocene seam in the record capture the typical succession of the vegetation in a coastal wetland during a period that was not affected by climate perturbation. This allows facies-dependent vegetational changes to be distinguished from those that were climate induced. Cluster analyses and NMDS of well-preserved palynomorph assemblages reveal four successional stages in the vegetation during peat accumulation: (1) a coastal vegetation, (2) an initial mire, (3) a transitional mire, and (4) a terminal mire. Biodiversity measures show that plant diversity decreased significantly in the successive stages. The highly diverse vegetation at the coast and in the adjacent initial mire was replaced by low diversity communities adapted to wet acidic environments and nutrient deficiency. The palynomorph assemblages are dominated by elements such as Alnus (Betulaceae) or Sphagnum (Sphagnaceae). Typical tropical elements which are characteristic for the middle Eocene part of the succession are missing. This indicates that a more warm-temperate climate prevailed in northwestern Germany during the early lower Eocene.

Environmental forcing on zooplankton distribution in the coastal waters of the Galápagos Islands: spatial and seasonal patterns in the copepod community structure

The oceanographic setting of the Galápagos Archipelago results in a spatially diverse marine environment suitable for a variety of species with different climatic requirements. The goal of this study is to demonstrate that the community of zooplankton in the Galápagos is highly structured by regional differences in productivity patterns and advective sources. Results are mostly based on biodiversity patterns of the copepod community collected over the Galápagos shelf between 2004 and 2006. Two contrasting marine environments were observed: a nutrient-rich upwelling system with a shallow mixed layer and a diatom-dominated phytoplankton community in the west, and a non-upwelling system with a deeper mixed layer, lower surface nutrient concentrations, and a phytoplankton community dominated by small cells in the east. These conditions drive spatial structuring of zooplankton that varies seasonally, with 3 distinct copepod communities separated geographically in western, central, and southeastern regions. The western upwelling region has a high-abundance and low-diversity community, whereas the non-upwelling eastern region has a lower-abundance and higher-diversity community. The eastern community is further differentiated into central and southeastern regions, the former with tropical species advected from the north, the latter with temperate species advected from the south. During the warm season, when the equatorial front moves south, species typical of the central region spread southwest across the archipelago. This is the first taxonomically comprehensive list of copepod species for the Galápagos Islands. A total of 164 copepod species are identified, including 22 species previously unreported from the Eastern Tropical Pacific.

Tree species influences soil microbial community diversity but not biomass in a karst forest in southwestern China

Abstract Aims The relationships between plant species and soil microorganisms remain indeterminable in different ecosystems worldwide. In karst ecosystems, soil microbial (SM) community structure and their environmental driving factors are poorly explored, and the relationships between plant species and soil microorganisms are unclear. This study aimed to characterize the general patterns of SM community composition and biomass, and to explore the specific tree species and soil physiochemical properties highly related to SM community diversity and biomass in a karst forest. Methods The effects of tree species on SM community composition and biomass were firstly investigated on the basis of 212 soil samples collected from five dominant tree species (Lithocarpus confinis Huang, Platycarya longipes Wu, Itea yunnanensis Franch., Machilus cavaleriei H. Lév. and Carpinus pubescens Burkill) through phospholipid fatty acid (PLFA) analysis of a karst evergreen and deciduous broad-leaved mixed forest in central Guizhou Province, southwestern China. The relationships between SM community structure and tree species and soil physiochemical properties were statistically analysed. Important Findings A total of 132 SM-PLFA biomarkers were detected. The average number of SM-PLFA biomarkers and microbial biomass in each soil sample were 65.97 and 11.22 µg g−1, respectively. Tree species influenced the number of SM-PLFA biomarkers but not the SM biomass. The number of SM-PLFA biomarkers of C. pubescens was significantly higher than that of other species (P < 0.05); the numbers of SM-PLFA biomarkers amongst other species showed no significant difference. Microbial biomass showed no relationships with the soil physiochemical properties of nutrient-rich surface soils but positively correlated (P < 0.05) with soil organic carbon, nitrogen and phosphorus concentrations in deeper soils. The karst forest in the plateau-surface terrain of central Guizhou Province presented a low fungal-to-bacterial ratio, low microbial biomass storage and high microbial community diversity. Specific tree species affect the SM community diversity in this kind of karst forest.

Age Patterning in Wild Chimpanzee Gut Microbiota Diversity Reveals Differences from Humans in Early Life

Survival in primates is facilitated by commensal gut microbes that ferment otherwise indigestible plant matter, resist colonization by pathogens, and train the developing immune system.1,2 However, humans are unique among primates in that we consume highly digestible foods, wean early, mature slowly, and exhibit high lifelong investments in maintenance.3-6 These adaptations suggest that lifetime trajectories of human-microbial relationships could differ from those of our closest living relatives. Here, we profile the gut microbiota of 166 wild chimpanzees aged 8months to 67 years in the Kibale National Park, Uganda and compare the patterns of gut microbial maturation to those previously observed in humans. We found that chimpanzee gut microbial alpha-diversity, composition, density, interindividual variation, and within-individual change over time varied significantly with age. Notably, gut microbial signatures in infants <2 years old were distinct across all five metrics. Infant chimpanzee guts were enriched in some of the same taxa prevalent in infant humans (e.g., Bifidobacterium, Streptococcus, and Bacteroides), and chimpanzee gut microbial communities, like those of humans, exhibited higher interindividual variation in infancy versus later in life. However, in direct contrast to human infants, chimpanzee infants harbored surprisingly high-diversity rather than low-diversity gut bacterial communities compared with older conspecifics. These data indicate differential trajectories of gut microbiota development in humans and chimpanzees that are consistent with interspecific differences in lactation, diet, and immune function. Probing the phenotypic consequences of differential early-life gut microbial diversity in chimpanzees and other primates will illuminate the life history impacts of the hominid-microbiome partnership.

Mountain endemism in Malesian geckos: can biotic interactions push lizards up hills?

Historical and contemporary processes shaping striking variation in terrestrial biodiversity along elevational gradients have received much attention from evolutionary biologists, often by way of comparisons to latitudinal environmental gradients. Here we synthetically review what is known of the diversity and origin of upland endemic geckos across the Malesian region (south-east Asia and Melanesia). Approximately 20% of the regional gecko fauna is endemic to mountains, but only around 8% have distributions centred on what we consider true montane habitats over 1000 metres above sea level. A majority of upland lineages lack close relatives in surrounding lowlands (although there are many exceptions) and some are highly phylogenetically divergent (e.g., estimated divergence from all other gecko taxa dating to the mid-Miocene or earlier). In several cases upland radiations are allied to other taxa centred on small islands or in disturbed lowland habitats, but absent or exceptionally rare in most lowland rainforest areas. A number of other upland lineages may have originated on smaller islands that are now merged into larger landmasses such as Sumatra and New Guinea. Based on often deep phylogenetic divergences, low community diversity and disjunct distributions across uplands and islands, we suggest that at least some upland lineages are more limited by biotic interactions than they are by climate. As global climates continue to warm in coming decades, such taxa may be particularly affected by upslope shifts of competitors and predators from lower elevations.

A cross-sectional study of trauma certification and hospital referral region diversity: A system theory approach

BackgroundThere are clear racial/ethnic disparities in the trauma care service delivery. However, no study has examined the relationships between structural determinants of trauma care designations (L-I through L-IV) or verification and social factors of the surrounding health region in the U.S. ObjectiveThis study examined the relationship between U.S. community segregation in a hospital referral region (HRR) and hospitals’ attainment of trauma certification and trauma designation L-I/II. MethodsTwo-year retrospective analysis of 2,348 acute hospitals that participated in the Hospital Value-Based Purchasing (HVBP) Program. Multivariate Poisson and 1:2 matching ratio using Propensity Score Matching regressions were used. Our primary variables were composite segregation scores for each county—aggregated to the HRR level (n=303)—and hospital performance on the HVBP Program. ResultsSegregated HRRs are 69% and 40% less likely to have an increase in the number of hospitals with trauma care designations L-I/II and trauma certification, respectively. Our matching ratio showed that hospitals with trauma certification or hospitals with trauma care designations L-I/II were more likely to be within HRRs with lower community diversity. ConclusionOur findings highlight that system disparities exist in trauma care. Research is needed to determine if other factors, such as resource allocation and reimbursement distribution, impact the availability of trauma facilities.

Rhizospheric Plant-Microbe Interactions: miRNAs as a Key Mediator.

The importance of microorganisms in plant development, nutrition, and stress resistance is unquestioned and has led to a more holistic approach of plant-microbe interactions, under the holobiont concept. The structure of the plant microbiota is often described as host driven, especially in the rhizosphere, where microbial communities are shaped by diverse rhizodeposits. Gradually, this anthropogenic vision is fading and being replaced by the idea that plants and microorganisms co-shape the plant microbiota. Through coevolution, plants and microbes have developed cross-kingdom communication channels. Here, we propose that miRNAs are crucial mediators of plant-microbe interactions and microbiota shaping in the rhizosphere. Moreover, we suggest, as an alternative to generally unsuccessful strategies based on microbial inoculants, miRNAs as a promising tool for novel holobiont engineering.

An integrated insight into bioleaching performance of chalcopyrite mediated by microbial factors: Functional types and biodiversity

Six artificial communities with different function or biodiversity were reconstructed by six typical bioleaching species for chalcopyrite leaching. Absence of sulfur oxidizers in communities significantly reduced copper extraction rates, and low diversity communities also exhibited slightly poor bioleaching performances. The variations of pH, redox potential, ferrous and copper ions indicated that the community with both sulfur oxidizers and high diversity showed fast adaptation to the environment and rapid dissolution of chalcopyrite. Integrated analysis of mineralogical and microbial parameters demonstrated that functional types of microorganisms made more contributions in mediating chalcopyrite dissolution than microbial diversity. Further correlation analysis between microbial types and chalcopyrite dissolution performances showed that sulfur oxidizers, especially Acidithiobacillus caldus, could greatly accelerate chalcopyrite dissolution by regulating solution physicochemical factors, such as redox potential and pH. This study provided a theoretical basis for improving bioleaching efficiency by balancing microbial functional types and biodiversity.

Diversity-dependent soil acidification under nitrogen enrichment constrains biomass productivity.

In most plant communities, the net effect of nitrogen enrichment is an increase in plant productivity. However, nitrogen enrichment also has been shown to decrease species richness and to acidify soils, each of which may diminish the long-term impact of nutrient enrichment on productivity. Here we use a long-term (20year) grassland plant diversity by nitrogen enrichment experiment in Minnesota, United States (a subexperiment within the BioCON experiment) to quantify the net impacts of nitrogen enrichment on productivity, including its potential indirect effects on productivity via changes in species richness and soil pH over an experimental diversity gradient. Overall, we found that nitrogen enrichment led to an immediate positive increment in productivity, but that this effect became nonsignificant over later years of the experiment, with the difference in productivity between fertilized and unfertilized plots decreasing in proportion to nitrogen addition-dependent declines in soil pH and losses of plant diversity. The net effect of nitrogen enrichment on productivity could have been 14.5% more on average over 20years in monocultures if not for nitrogen-induced decreases in pH and about 28.5% more on average over 20years in 16 species communities if not for nitrogen-induced species richness losses. Together, these results suggest that the positive effects of nutrient enrichment on biomass production can diminish in their magnitude over time, especially because of soil acidification in low diversity communities and especially because of plant diversity loss in initially high diversity communities.

Drivers of piscivory in a globally distributed aquatic predator (brown trout): a meta-analysis

There is growing interest in the delineation of feeding patterns in animals, but little is known about the interaction of multiple explanatory factors across broad geographical scales. The goal of this study was to identify the factors that together determine population-level patterns in piscivory in a globally distributed aquatic predator, the brown trout (Salmo trutta). A meta-analysis of peer-reviewed studies revealed that the prevalence (frequency of occurrence, %) of piscivory increases from riverine to marine ecosystems, with fish community type and the size-structure (ontogeny) of brown trout populations being the key drivers. Thus, piscivory was related to ecosystem-specific differences in predator body size (increasing in populations with large individuals) and fish community configurations (increasing with fish species richness). Fish species richness imposes important limitations on (i.e. in low diversity scenarios) or facilitate (i.e. in high diversity scenarios) piscivory in brown trout populations, with a low prevalence expected in low-diversity fish communities. In fresh water, piscivory is higher in lentic than lotic ecosystems and, in the former, increases with latitude. Competition in multi-species systems is expected to be higher than in simpler systems because the size-structure and species composition of fish assemblages, explaining cross-ecosystem differences in piscivory.

Contrasting effects of plant diversity on β‐ and γ‐diversity of grassland invertebrates

The diversity of primary producers strongly affects the structure and diversity of species assemblages at other trophic levels. However, limited knowledge exists of how plant diversity effects at small spatial scales propagate to consumer communities at larger spatial scales. We assessed arthropod community β and γ-diversity in response to experimentally manipulated plant community richness in two long-term grassland biodiversity experiments (Jena, Germany and Cedar Creek, USA) replicated over two years. We calculated arthropod species turnover among all plot combinations (β-diversity), and accumulated number of arthropod species occurring on (1) all pairwise plot combinations and (2) 40 randomly selected six-plot combinations(γ-diversity). The components of arthropod diversity were tested against two measures of plant diversity, namely average plant α-diversity ( ) and the average difference in plant α-diversity between plots (ΔPSR). Whereas points to the overall importance of plant α-diversity for arthropod community turnover and diversity on a larger scale, ΔPSR represents the role of habitat heterogeneity. We demonstrate that arthropod γ-diversity is supported by high, homogeneous plant α-diversity, despite lower arthropod β-diversity among high- compared to low-diversity plant communities. We also show that, in six-plot combinations, average plant α-diversity has a positive influence on arthropod γ-diversity only when homogeneity in plant α-diversity is also high. Varying heterogeneity in six-plot combinations showed that combinations consisting solely of plots with an intermediate level of plant α-diversity support a higher number of arthropod species compared to combinations that contain a mix of high- and low-diversity plots. In fact, equal levels of arthropod diversity were found for six-plot combinations with only intermediate or high plant α-diversity, due to saturating benefits of local and larger-scale plant diversity for higher trophic levels. Our results, alongside those of recent observational studies, strongly suggest that maintaining high α-diversity in plant communities is important for conserving multiple components of arthropod diversity. As arthropods carry out a range of essential ecosystem functions, such as pollination and natural pest-control, our findings provide crucial insight for effective planning of human-dominated landscapes to maximize both ecological and economic benefits in grassland systems.

Effect of clonal growth form on the relative performance of species in experimental communities over time

Due to competition for resources, the performance of plant species in communities is modified by traits affecting their efficiency in resource uptake and use. Clonal growth by stolons or rhizomes enables plants to spread laterally and to share resources among interconnected ramets; therefore, clonal growth represents an important trait that likely affects the competitive ability of species. We tested the effect of different clonal growth forms on the relative performance of plant species in communities of the Jena Biodiversity Experiment over a ten-year period. Clonal growth form did not have a significant effect on relative performance in early stages of the communities. Surprisingly, none of the clonal growth forms gained dominance over time, but the species with long rhizomes generally performed slightly better than the other species, particularly in communities of low diversity. The stoloniferous species performed better in communities with a higher proportion of nonclonals, suggesting complementarity of the light exploitation strategies of stoloniferous and nonclonal species. Our results show the importance of clonal growth traits for the competitive abilities of plants in the context of community development, species diversity and community composition, as well as the necessity of distinguishing among different clonal growth forms.

Patterns of Understory Community Assembly and Plant Trait-Environment Relationships in Temperate SE European Forests

We analyzed variation in the functional composition and diversity of understory plant communities across different forest vegetation types in Slovenia. The study area comprises 10 representative forest sites covering broad gradients of environmental conditions (altitude, geology, light availability, soil type and reaction, nutrient availability, soil moisture), stand structural features and community attributes. The mean and variation of the trait values were quantified by community-weighted means and functional dispersion for four key plant functional traits: plant height, seed mass, specific leaf area and leaf dry matter content. At each study site, forest vegetation was surveyed at two different spatial scales (4 and 100 m2) in order to infer scale-dependent assembly rules. Patterns of community assembly were tested with a null model approach. We found that both trait means and diversity values responded to conspicuous gradients in environmental conditions and species composition across the studied forests. Our results mainly support the idea of abiotic filtering: more stressful environmental conditions (e.g., high altitude, low soil pH and low nutrient content) were occupied by communities of low functional diversity (trait convergence), which suggests a selective effect for species with traits adapted to such harsh conditions. However, trait convergence was also detected in some more resource-rich forest sites (e.g., low altitude, high soil productivity), most likely due to the presence of competitive understory species with high abundance domination. This could, at least to some extent, indicate the filtering effect of competitive interactions. Overall, we observed weak and inconsistent patterns regarding the impact of spatial scale, suggesting that similar assembly mechanisms are operating at both investigated spatial scales. Our findings contribute to the baseline understanding of the role of both abiotic and biotic constraints in forest community assembly, as evidenced by the non-random patterns in the functional structure of distinct temperate forest understories.

Community diversity outweighs effect of warming on plant colonization.

Abiotic environmental change, local species extinctions and colonization of new species often co-occur. Whether species colonization is driven by changes in abiotic conditions or reduced biotic resistance will affect community functional composition and ecosystem management. We use a grassland experiment to disentangle effects of climate warming and community diversity on plant species colonization. Community diversity had dramatic impacts on the biomass, richness and traits of plant colonists. Three times as many species colonized the monocultures than the high diversity 17 species communities (~30 vs. 10 species), and colonists collectively produced 10 times as much biomass in the monocultures than the high diversity communities (~30 vs. 3g/m2 ). Colonists with resource-acquisitive strategies (high specific leaf area, light seeds, short heights) accrued more biomass in low diversity communities, whereas species with conservative strategies accrued most biomass in high diversity communities. Communities with higher biomass of resident C4 grasses were more resistant to colonization by legume, nonlegume forb and C3 grass colonists, but not by C4 grass colonists. Compared with effects of diversity, 6years of 3°C-above-ambient temperatures had little impact on plant colonization. Warmed subplots had ~3 fewer colonist species than ambient subplots and selected for heavier seeded colonists. They also showed diversity-dependent changes in biomass of C3 grass colonists, which decreased under low diversity and increased under high diversity. Our findings suggest that species colonization is more strongly affected by biotic resistance from residents than 3°C of climate warming. If these results were extended to invasive species management, preserving community diversity should help limit plant invasion, even under climate warming.

More Is Not Always Better: Coinfections with Defensive Symbionts Generate Highly Variable Outcomes.

Animal-associated microbes are highly variable, contributing to a diverse set of symbiont-mediated phenotypes. Given that host and symbiont genotypes, and their interactions, can impact symbiont-based phenotypes across environments, there is potential for extensive variation in fitness outcomes. Pea aphids, Acyrthosiphon pisum, host a diverse assemblage of heritable facultative symbionts (HFS) with characterized roles in host defense. Protective phenotypes have been largely studied as single infections, but pea aphids often carry multiple HFS species, and particular combinations may be enriched or depleted compared to expectations based on chance. Here, we examined the consequences of single infection versus coinfection with two common HFS exhibiting variable enrichment, the antiparasitoid Hamiltonella defensa and the antipathogen Regiella insecticola, across three host genotypes and environments. As expected, single infections with either H. defensa or R. insecticola raised defenses against their respective targets. Single infections with protective H. defensa lowered aphid fitness in the absence of enemy challenge, while R. insecticola was comparatively benign. However, as a coinfection, R. insecticola ameliorated H. defensa infection costs. Coinfected aphids continued to receive antiparasitoid protection from H. defensa, but protection was weakened by R. insecticola in two clones. Notably, H. defensa eliminated survival benefits conferred after pathogen exposure by coinfecting R. insecticola Since pathogen sporulation was suppressed by R. insecticola in coinfected aphids, the poor performance likely stemmed from H. defensa-imposed costs rather than weakened defenses. Our results reveal a complex set of coinfection outcomes which may partially explain natural infection patterns and suggest that symbiont-based phenotypes may not be easily predicted based solely on infection status.IMPORTANCE The hyperdiverse arthropods often harbor maternally transmitted bacteria that protect against natural enemies. In many species, low-diversity communities of heritable symbionts are common, providing opportunities for cooperation and conflict among symbionts, which can impact the defensive services rendered. Using the pea aphid, a model for defensive symbiosis, we show that coinfections with two common defensive symbionts, the antipathogen Regiella and the antiparasite Hamiltonella, produce outcomes that are highly variable compared to single infections, which consistently protect against designated enemies. Compared to single infections, coinfections often reduced defensive services during enemy challenge yet improved aphid fitness in the absence of enemies. Thus, infection with multiple symbionts does not necessarily create generalist aphids with "Swiss army knife" defenses against numerous enemies. Instead, particular combinations of symbionts may be favored for a variety of reasons, including their abilities to lessen the costs of other defensive symbionts when enemies are not present.

Bacterial adaptation is constrained in complex communities

A major unresolved question is how bacteria living in complex communities respond to environmental changes. In communities, biotic interactions may either facilitate or constrain evolution depending on whether the interactions expand or contract the range of ecological opportunities. A fundamental challenge is to understand how the surrounding biotic community modifies evolutionary trajectories as species adapt to novel environmental conditions. Here we show that community context can dramatically alter evolutionary dynamics using a novel approach that ‘cages’ individual focal strains within complex communities. We find that evolution of focal bacterial strains depends on properties both of the focal strain and of the surrounding community. In particular, there is a stronger evolutionary response in low-diversity communities, and when the focal species have a larger genome and are initially poorly adapted. We see how community context affects resource usage and detect genetic changes involved in carbon metabolism and inter-specific interaction. The findings demonstrate that adaptation to new environmental conditions should be investigated in the context of interspecific interactions.

Predaceous Toxorhynchites mosquitoes require a living gut microbiota to develop.

Most species of mosquitoes are detritivores that feed on decaying plant and animal materials in their aquatic environment. Studies of several detritivorous mosquito species indicate that they host relatively low diversity communities of microbes that are acquired from the environment while feeding. Our recent results also indicate that detritivorous species normally require a living gut microbiota to grow beyond the first instar. Less well known is that some mosquitoes, including those belonging to the genus Toxorhynchites, are predators that feed on other species of mosquitoes and nektonic prey. In this study, we asked whether predaceous Toxorhynchites amboinensis larvae still require living microbes in their gut in order to develop. Using the detritivorous mosquito Aedes aegypti as prey, we found that T. amboinensis larvae harbour bacterial communities that are highly similar to that of their prey. Functional assays showed that T. amboinensis first instars provided axenic (i.e. bacteria-free) prey failed to develop, while two bacterial species present in gnotobiotic (i.e. colonized by one or more known bacterial species) prey successfully colonized the T. amboinensis gut and rescued development. Axenic T. amboinensis larvae also displayed defects in growth consistent with previously identified roles for microbe-mediated gut hypoxia in nutrient acquisition and assimilation in A. aegypti. Collectively, these results support a conserved role for gut microbes in regulating the development of mosquitoes with different feeding strategies.