Phreatic eruptions at Nakamachineshiri and Ponmachineshiri reflect the vigorous fumarolic and hydrothermal activities of Meakandake volcano. Thus, phreatic eruptions are likely to reoccur in the future, and hydrothermal systems should be understood to mitigate the risks of potential future hazards. Here, we reveal the results of long-term geochemical monitoring of hot spring waters and fumarolic gases since 1986 and discuss the chemical and temperature changes in hot spring waters, discharging at the foot, related to volcanic unrest. In Nakamachineshiri, related to the increase in seismic and fumarolic activity since 2019, the HCl concentration of the fumarolic gas has increased, and δD and δ18O values have also increased to approach those of the andesitic water. Simultaneously, with the increase in fumarolic and hydrothermal activity, the temperature and Cl concentration of the Meakan Onsen (MO) hot spring water discharged at the western foot of Nakamachineshiri have increased. The chemical characteristics of the fumarolic gas and MO water indicate that they were derived from a hydrothermal system in the shallow subsurface of Nakamachineshiri. Thus, we can consider that the temperature and chemical increases in the MO water represent activation of the system, and monitoring the MO water provides important information for understanding the present state of Nakamachineshiri. At Ponmachineshiri, phreatic eruptions occurred in 1988, 1996, 1998, 2006, and 2008, and seismic and fumarolic activity has sometimes increased since 1986 when we began our monitoring program. At the western foot of Ponmachineshiri, hot spring water is discharged at Yunotaki (YNT_U and YNT_L) and Lake Onneto (ONT). The results of our monitoring suggest that the YNT_U water is formed by mixing thermal water with a high HCO3 molar ratio (HCO3-type) and thermal water containing Cl and SO4 (Cl-SO4-type), which causes temperature and chemical changes related to the mixing ratio of these thermal waters related to volcanic unrest, especially increases in seismic activity. The Cl and SO4 concentrations in the ONT water began to increase approximately two years before the phreatic eruptions and increase in fumarolic activity. Such chemical increases can be explained by the increase in the supply of Cl-SO4-type thermal water and are likely to indicate precursor changes in volcanic unrest. Therefore, we expect to utilize these hot spring waters to understand the present state of Ponmachineshiri and detect precursor changes to future volcanic unrest.